| Definition | Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008390 |
| Length | 3,556,545 |
Click here to switch to the map view.
The map label for this gene is 115352498
Identifier: 115352498
GI number: 115352498
Start: 2695152
End: 2695703
Strand: Direct
Name: 115352498
Synonym: Bamb_2447
Alternate gene names: NA
Gene position: 2695152-2695703 (Clockwise)
Preceding gene: 115352495
Following gene: 115352500
Centisome position: 75.78
GC content: 65.58
Gene sequence:
>552_bases ATGTATAAGAAGACTTCCCGCGTGGCCATCGCGGCCGCCACCGTGCTCGCTCTCGCATTCGGCACCGCGCATGCGGCTCA ACCCAACGACATGCCGCCGCCTGGCGGCCCCGGCATGCACCAGATGCACGGCGGCCATGACGGCGGCCCGTTCGGCGTGA TCATGAAGCTGCACGACCAGCTGAAGCTCAATGCGTCGCAGGAACAGCAGTGGCAGACGGCCGTCAACACGATGAAGCAG AACCATGAAGCGATGCGCAAGAGCCACGAGCAGATGCGCGAGCAATTCAAGGCGCAGCAGAACCAGCCGATCCTCGACCT GAATGCGATGCACGCCGCCCGCCAGCAGGCTGAGCAGCAGAATGCGCAACTGCGCGAGCAGAGCTCGGCCGCGTGGCTCG CGTTCTACAACGGGCTGAACGACCAGCAGAAGACCACGGTCAGCACGGCGCTCAAGCAGCAGTTCGCGCGGATGGAGCAG CGCCACGAGACGATGAAGGAACGCTGGCAGCAGCACCGCGCGGCCAAGGGCGCGTCGGCGCCGGCGCAGTAA
Upstream 100 bases:
>100_bases ACCGGCCGGGACCCGCGCCGCTAACCTGCGTCTTACCGGATGCGGACACGAATCACCGCGCACCGCATCGCCGGACCCTT TGATACAAGGAGTTTCTGAA
Downstream 100 bases:
>100_bases GCCGGCAGGCCGCCTCCCGGGCGGCACCGCGGGGGACGCGGGCGCTCAGCGCCCCGTCCCCCGTTTCATTTCAGGCGACG TCGAACAGCAGCACCTCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 183; Mature: 183
Protein sequence:
>183_residues MYKKTSRVAIAAATVLALAFGTAHAAQPNDMPPPGGPGMHQMHGGHDGGPFGVIMKLHDQLKLNASQEQQWQTAVNTMKQ NHEAMRKSHEQMREQFKAQQNQPILDLNAMHAARQQAEQQNAQLREQSSAAWLAFYNGLNDQQKTTVSTALKQQFARMEQ RHETMKERWQQHRAAKGASAPAQ
Sequences:
>Translated_183_residues MYKKTSRVAIAAATVLALAFGTAHAAQPNDMPPPGGPGMHQMHGGHDGGPFGVIMKLHDQLKLNASQEQQWQTAVNTMKQ NHEAMRKSHEQMREQFKAQQNQPILDLNAMHAARQQAEQQNAQLREQSSAAWLAFYNGLNDQQKTTVSTALKQQFARMEQ RHETMKERWQQHRAAKGASAPAQ >Mature_183_residues MYKKTSRVAIAAATVLALAFGTAHAAQPNDMPPPGGPGMHQMHGGHDGGPFGVIMKLHDQLKLNASQEQQWQTAVNTMKQ NHEAMRKSHEQMREQFKAQQNQPILDLNAMHAARQQAEQQNAQLREQSSAAWLAFYNGLNDQQKTTVSTALKQQFARMEQ RHETMKERWQQHRAAKGASAPAQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20487; Mature: 20487
Theoretical pI: Translated: 10.47; Mature: 10.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 6.0 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 6.0 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYKKTSRVAIAAATVLALAFGTAHAAQPNDMPPPGGPGMHQMHGGHDGGPFGVIMKLHDQ CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH LKLNASQEQQWQTAVNTMKQNHEAMRKSHEQMREQFKAQQNQPILDLNAMHAARQQAEQQ HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH NAQLREQSSAAWLAFYNGLNDQQKTTVSTALKQQFARMEQRHETMKERWQQHRAAKGASA HHHHHHHHCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC PAQ CCC >Mature Secondary Structure MYKKTSRVAIAAATVLALAFGTAHAAQPNDMPPPGGPGMHQMHGGHDGGPFGVIMKLHDQ CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH LKLNASQEQQWQTAVNTMKQNHEAMRKSHEQMREQFKAQQNQPILDLNAMHAARQQAEQQ HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH NAQLREQSSAAWLAFYNGLNDQQKTTVSTALKQQFARMEQRHETMKERWQQHRAAKGASA HHHHHHHHCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC PAQ CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA