| Definition | Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008390 |
| Length | 3,556,545 |
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The map label for this gene is 115352495
Identifier: 115352495
GI number: 115352495
Start: 2692603
End: 2692869
Strand: Direct
Name: 115352495
Synonym: Bamb_2444
Alternate gene names: NA
Gene position: 2692603-2692869 (Clockwise)
Preceding gene: 115352492
Following gene: 115352498
Centisome position: 75.71
GC content: 59.93
Gene sequence:
>267_bases ATGGCAGGAAATTTGGTGATCGTCTGCCGCGATCAGGACGCCGAGGCGTTCTACGAGCTGATGCAGGAATACGGGTCGTT CCAGACCCGGCTGTCGTCGACGGCGTGGTACCTGAACATGAACGTCGTGCCCGAATCACTGCAGGAGGAAATCCTGGAGC GCCTCGGCCGCTATACGACCGTCTATATCTTCGAGGCCACGAGCGTGACCTACAACACCATCGACAGCAACGCCGCCGAG ACGCTCGGCTCGCTGTTCGGCGAATGA
Upstream 100 bases:
>100_bases GTCATCGGACGATCGCGGCGAAGCAGGTATGATCGGGGCTAGCCCCCGGGGTGTGCCGACCCGCGGCCCCGGGGATTGAC CGACCAGCTGGAGGAAGGGA
Downstream 100 bases:
>100_bases TGCCGCGCGGCGCCTGCCCGGCAGGCGCCGCTTCTCACGCAGCCTGTGCGTGAAGTTCGTCCTTCGGCACCGCGTCGAAC GGGAACGTCATCGCCACGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 88; Mature: 87
Protein sequence:
>88_residues MAGNLVIVCRDQDAEAFYELMQEYGSFQTRLSSTAWYLNMNVVPESLQEEILERLGRYTTVYIFEATSVTYNTIDSNAAE TLGSLFGE
Sequences:
>Translated_88_residues MAGNLVIVCRDQDAEAFYELMQEYGSFQTRLSSTAWYLNMNVVPESLQEEILERLGRYTTVYIFEATSVTYNTIDSNAAE TLGSLFGE >Mature_87_residues AGNLVIVCRDQDAEAFYELMQEYGSFQTRLSSTAWYLNMNVVPESLQEEILERLGRYTTVYIFEATSVTYNTIDSNAAET LGSLFGE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9977; Mature: 9846
Theoretical pI: Translated: 3.76; Mature: 3.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGNLVIVCRDQDAEAFYELMQEYGSFQTRLSSTAWYLNMNVVPESLQEEILERLGRYTT CCCCEEEEEECCCHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCHHHHHHHHHHHCCEEE VYIFEATSVTYNTIDSNAAETLGSLFGE EEEEEECCEEEECCCCHHHHHHHHHHCC >Mature Secondary Structure AGNLVIVCRDQDAEAFYELMQEYGSFQTRLSSTAWYLNMNVVPESLQEEILERLGRYTT CCCEEEEEECCCHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCHHHHHHHHHHHCCEEE VYIFEATSVTYNTIDSNAAETLGSLFGE EEEEEECCEEEECCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA