The gene/protein map for NC_008390 is currently unavailable.
Definition Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence.
Accession NC_008390
Length 3,556,545

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The map label for this gene is 115352452

Identifier: 115352452

GI number: 115352452

Start: 2650535

End: 2651098

Strand: Direct

Name: 115352452

Synonym: Bamb_2401

Alternate gene names: NA

Gene position: 2650535-2651098 (Clockwise)

Preceding gene: 115352451

Following gene: 115352453

Centisome position: 74.53

GC content: 55.14

Gene sequence:

>564_bases
ATGACAGAAACGACCTTTGCAGAACCGGGTGACGATCTGCCGCCCCACCTATGCCCGCTTTTTATCATGGCCGCTTATCC
GTACATGCAAATCGAGGACCGGCAAATCTTTGCGGACGGCCTTGCACGACTCACGAACGCGCTGATTATTGCTGGCACGA
AAGGCGAGTTAGCTGTCTTTCACCCAAAGACGCTACTGCCCTACGATGCTCATAACGCAGGGTTTGAGGACGAGCCGAGC
CCGGTTACAGCAGACTGGGTCGCACGAATCAATGATGTACTCCATTGGTTCGTAGAGAAGAACATCGAGGCTGCAAAACC
ACTCGTCGATACGATGGTGGCGCACGTCAAAATCGAGAAACCGATGTCTGTTGATCGGCGCACCCAAATGATGGAAGCGC
TAGAGCGCAACGGCGGAAACAAGACAAAGACGGCTACCGAGTTCGGCATCAGCCGTCAGCGCCTCGCCCAGATAATCCAA
CAGGGATCTGCCCAATCAATTGAGCGCAAGGGCCTTGCGGTTGTGCCGCATGACCCTTTCGGTGTGGCGCCCAAAGCCAA
GTAG

Upstream 100 bases:

>100_bases
TCGATGAATTACGTGCGGGTGCAGCAATCCTTTCATTTCCGTCTCTTGCATAGCGAATGCGTGTACAACAACACACTTCC
ACGCCTAAAGGACTGGTGAC

Downstream 100 bases:

>100_bases
CACCGTTATTTCTTGCTCCCCCCTAGCCGAAAGGGGGGCTTGCGACCGCCAAATGCACTCCTCTAACAACGCACAAGGAG
TGCAATGTATGTCGACGCAA

Product: helix-turn-helix, Fis-type

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 187; Mature: 186

Protein sequence:

>187_residues
MTETTFAEPGDDLPPHLCPLFIMAAYPYMQIEDRQIFADGLARLTNALIIAGTKGELAVFHPKTLLPYDAHNAGFEDEPS
PVTADWVARINDVLHWFVEKNIEAAKPLVDTMVAHVKIEKPMSVDRRTQMMEALERNGGNKTKTATEFGISRQRLAQIIQ
QGSAQSIERKGLAVVPHDPFGVAPKAK

Sequences:

>Translated_187_residues
MTETTFAEPGDDLPPHLCPLFIMAAYPYMQIEDRQIFADGLARLTNALIIAGTKGELAVFHPKTLLPYDAHNAGFEDEPS
PVTADWVARINDVLHWFVEKNIEAAKPLVDTMVAHVKIEKPMSVDRRTQMMEALERNGGNKTKTATEFGISRQRLAQIIQ
QGSAQSIERKGLAVVPHDPFGVAPKAK
>Mature_186_residues
TETTFAEPGDDLPPHLCPLFIMAAYPYMQIEDRQIFADGLARLTNALIIAGTKGELAVFHPKTLLPYDAHNAGFEDEPSP
VTADWVARINDVLHWFVEKNIEAAKPLVDTMVAHVKIEKPMSVDRRTQMMEALERNGGNKTKTATEFGISRQRLAQIIQQ
GSAQSIERKGLAVVPHDPFGVAPKAK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20703; Mature: 20572

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTETTFAEPGDDLPPHLCPLFIMAAYPYMQIEDRQIFADGLARLTNALIIAGTKGELAVF
CCCCCCCCCCCCCCHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHCEEEEECCCCCEEEE
HPKTLLPYDAHNAGFEDEPSPVTADWVARINDVLHWFVEKNIEAAKPLVDTMVAHVKIEK
CCCEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCC
PMSVDRRTQMMEALERNGGNKTKTATEFGISRQRLAQIIQQGSAQSIERKGLAVVPHDPF
CCCHHHHHHHHHHHHHCCCCCCCHHHHHCCCHHHHHHHHHCCCHHHHHHCCCEEECCCCC
GVAPKAK
CCCCCCC
>Mature Secondary Structure 
TETTFAEPGDDLPPHLCPLFIMAAYPYMQIEDRQIFADGLARLTNALIIAGTKGELAVF
CCCCCCCCCCCCCHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHCEEEEECCCCCEEEE
HPKTLLPYDAHNAGFEDEPSPVTADWVARINDVLHWFVEKNIEAAKPLVDTMVAHVKIEK
CCCEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCC
PMSVDRRTQMMEALERNGGNKTKTATEFGISRQRLAQIIQQGSAQSIERKGLAVVPHDPF
CCCHHHHHHHHHHHHHCCCCCCCHHHHHCCCHHHHHHHHHCCCHHHHHHCCCEEECCCCC
GVAPKAK
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA