Definition Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence.
Accession NC_008390
Length 3,556,545

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The map label for this gene is 115352422

Identifier: 115352422

GI number: 115352422

Start: 2616639

End: 2617481

Strand: Direct

Name: 115352422

Synonym: Bamb_2371

Alternate gene names: NA

Gene position: 2616639-2617481 (Clockwise)

Preceding gene: 115352419

Following gene: 115352423

Centisome position: 73.57

GC content: 64.77

Gene sequence:

>843_bases
ATGCGTTTCGAAGGATCCTCGCACTACGTCGCCACCGACGACCTGAAACTCGCGGTCAACGCCGCGCTGACGCTGCAACG
CCCGCTGCTGATCAAGGGCGAGCCCGGCACCGGCAAGACCATGCTCGCCGAGGAAGTGGCGGCCGCGCTCGACATGCCGC
TGCTGCAGTGGCACATCAAGTCGACGACCAAAGCGCAGCAGGGCCTGTACGAATACGACGCGGTATCGCGGCTGCGCGAC
TCGCAGCTCGGCGACGAGCGCGTGAAGGATATCTCGAACTACATCGTGAAGGGGGTGCTGTGGCAGGCGTTCGACGCCGA
GCGCCCGAGCGTGCTGCTGATCGACGAGATCGACAAGGCCGACATCGAATTCCCGAACGACCTGCTGCGCGAGCTCGACC
GGATGGAATTCCATGTGTACGAGACGCGCGAGACCGTGCGCGCGAAGCACCGCCCGCTCGTGATCATCACGTCCAACAAC
GAGAAGGAGCTGCCCGACGCGTTCCTGCGCCGCTGCTTCTTCCACTACATCCAGTTTCCCGACGCGTCGACGATGCAGAA
GATCGTCGCGGTCCACTTCCCGAACATCCGCGAGGAGCTGCTGCGCGCGGCGCTCGAGAGCTTCTTCGAATTGCGCACCG
TCTCGGGGCTGAAGAAGAAGCCGTCGACGTCCGAGTTGCTCGACTGGCTGAAGCTGCTGCTCGCCGAGAACATCCCGGCC
GACGCGCTGCGCGGCGCCGACGCGAAGCAGATCGTGCCGCCGCTCGCGGGCGCGCTGCTGAAGAACGAGCAGGATCTGAG
CCTGCTCGAGCGGCTCGTCTACATGAACCGGCACAACCGGTAA

Upstream 100 bases:

>100_bases
CCCGCCCCGCCGCAGCTCCGCAACGATACGCGCCCCCGGCCCGACTGGACAGCCCTTCTGACTTATACTGGGTTTTTTTG
CGATTAAGAAGAGCGCCACC

Downstream 100 bases:

>100_bases
CCCACCCGCGAAGGCCCGGCCATGCTGCTCAATTTCTTCTACGCGCTGCGCGCAGCCAAGCTGCCCGTCTCGGTGAAGGA
ATACCTGACGCTGCTCGAAT

Product: ATPase

Products: NA

Alternate protein names: ATPase AAA Family; AAA ATPase Central Domain Protein; ATPase Central Domain-Containing Protein; MoxR-Like ATPase; AAA Family ATPase; AAA ATPase; ATPase AAA Family Protein; ATPase-Like Protein; AAA_5 ATPase; ATPase Associated With Various Cellular Activities; Carbon Monoxide Dehydrogenase D Protein; MoxR Family ATPase; ATPase Aaa Family; ATPase Protein; Aaa ATPase; Oxidoreductase; AAA ATPase Central RegionATPase; ATP-Dependent Protease LA Protein; MoxR-Like ATPases; CoxD-Like Protein; ATP-Dependent Protease Subunit; ClpA/ClpB Family Protein; AAA ATPase Family Protein; MoxR-Like ATPase CoxD

Number of amino acids: Translated: 280; Mature: 280

Protein sequence:

>280_residues
MRFEGSSHYVATDDLKLAVNAALTLQRPLLIKGEPGTGKTMLAEEVAAALDMPLLQWHIKSTTKAQQGLYEYDAVSRLRD
SQLGDERVKDISNYIVKGVLWQAFDAERPSVLLIDEIDKADIEFPNDLLRELDRMEFHVYETRETVRAKHRPLVIITSNN
EKELPDAFLRRCFFHYIQFPDASTMQKIVAVHFPNIREELLRAALESFFELRTVSGLKKKPSTSELLDWLKLLLAENIPA
DALRGADAKQIVPPLAGALLKNEQDLSLLERLVYMNRHNR

Sequences:

>Translated_280_residues
MRFEGSSHYVATDDLKLAVNAALTLQRPLLIKGEPGTGKTMLAEEVAAALDMPLLQWHIKSTTKAQQGLYEYDAVSRLRD
SQLGDERVKDISNYIVKGVLWQAFDAERPSVLLIDEIDKADIEFPNDLLRELDRMEFHVYETRETVRAKHRPLVIITSNN
EKELPDAFLRRCFFHYIQFPDASTMQKIVAVHFPNIREELLRAALESFFELRTVSGLKKKPSTSELLDWLKLLLAENIPA
DALRGADAKQIVPPLAGALLKNEQDLSLLERLVYMNRHNR
>Mature_280_residues
MRFEGSSHYVATDDLKLAVNAALTLQRPLLIKGEPGTGKTMLAEEVAAALDMPLLQWHIKSTTKAQQGLYEYDAVSRLRD
SQLGDERVKDISNYIVKGVLWQAFDAERPSVLLIDEIDKADIEFPNDLLRELDRMEFHVYETRETVRAKHRPLVIITSNN
EKELPDAFLRRCFFHYIQFPDASTMQKIVAVHFPNIREELLRAALESFFELRTVSGLKKKPSTSELLDWLKLLLAENIPA
DALRGADAKQIVPPLAGALLKNEQDLSLLERLVYMNRHNR

Specific function: Unknown

COG id: COG0714

COG function: function code R; MoxR-like ATPases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31993; Mature: 31993

Theoretical pI: Translated: 6.18; Mature: 6.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFEGSSHYVATDDLKLAVNAALTLQRPLLIKGEPGTGKTMLAEEVAAALDMPLLQWHIK
CCCCCCCCEEECCCHHHHHHHHHEECCCEEEECCCCCCHHHHHHHHHHHHCCHHHHHHHH
STTKAQQGLYEYDAVSRLRDSQLGDERVKDISNYIVKGVLWQAFDAERPSVLLIDEIDKA
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCC
DIEFPNDLLRELDRMEFHVYETRETVRAKHRPLVIITSNNEKELPDAFLRRCFFHYIQFP
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCC
DASTMQKIVAVHFPNIREELLRAALESFFELRTVSGLKKKPSTSELLDWLKLLLAENIPA
CHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCH
DALRGADAKQIVPPLAGALLKNEQDLSLLERLVYMNRHNR
HHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MRFEGSSHYVATDDLKLAVNAALTLQRPLLIKGEPGTGKTMLAEEVAAALDMPLLQWHIK
CCCCCCCCEEECCCHHHHHHHHHEECCCEEEECCCCCCHHHHHHHHHHHHCCHHHHHHHH
STTKAQQGLYEYDAVSRLRDSQLGDERVKDISNYIVKGVLWQAFDAERPSVLLIDEIDKA
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCC
DIEFPNDLLRELDRMEFHVYETRETVRAKHRPLVIITSNNEKELPDAFLRRCFFHYIQFP
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCC
DASTMQKIVAVHFPNIREELLRAALESFFELRTVSGLKKKPSTSELLDWLKLLLAENIPA
CHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCH
DALRGADAKQIVPPLAGALLKNEQDLSLLERLVYMNRHNR
HHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA