The gene/protein map for NC_003413 is currently unavailable.
Definition Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence.
Accession NC_008390
Length 3,556,545

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The map label for this gene is 115352413

Identifier: 115352413

GI number: 115352413

Start: 2607747

End: 2609582

Strand: Direct

Name: 115352413

Synonym: Bamb_2362

Alternate gene names: NA

Gene position: 2607747-2609582 (Clockwise)

Preceding gene: 115352411

Following gene: 115352414

Centisome position: 73.32

GC content: 68.14

Gene sequence:

>1836_bases
ATGCCCGCCTTGATCGAAGACTACGCCCTCGTCGGCGACGGACACACCGCCGCGCTGATTTCGAAAGAAGGCTCCGTCGA
CTGGCTGTGCTGGCCCCGCTTCGATTCGGGCGCCTGTTTCGCGGCGCTGGTCGGCACCCCCGAGCACGGCCGCTGGCTGC
TCGCGCCGGCTGCCGACGCCGCGATCACGCACACGTCACGCCGCTACCGCGGCGACACGCTGATTCTCGAAACCGACTAC
GAAAGCGCCGACGGCGCCGTCACCGTGATCGACTTCATGCCGCCCGGCAATGGCTGGTCGGAACTCGTGCGGATCGTCGT
CGGCCGGCACGGCACGATGAAGATGCGCATGGAGCTGGTGTTGCGCTTCGACTACGGTTTCTCGATCCCGTGGGTCACGC
AGCTGTCACGCGAGAACGGGGTGAAAGCAATCGCCGGACCCGATACGGTCGTGCTGCGCACGCCGGTCGAGCTCACCGGC
AAGAACCTGCACACGCTCGCCGAATTCACGGTGAGCGCCGACGAGCGCATCCCGTTTTCGCTCGGCTACGCGGCGTCCCA
CCTGCGGCTGCCGCCCGCGCGCGATCCGCTGTCGATGCTCGCGCGCACCGAGAACTACTGGCTTGAATGGTCGGGGCGCT
GCCAGGTGCAGGGCCGCTACGCGGCCGCCGTGCGCCGCTCGCTGATCACGCTGAAGGCGCTCGCGTACGAGCCGACCGGC
GGCATCGTCGCGGCGCCCACCACGTCGCTGCCCGAGAAGATCGGCGGCAACCGCAACTGGGACTATCGCTACTGCTGGCT
GCGCGATGCGACGATCACGCTGCTCGCGCTGATGCGCGGCGGCTACTACGACGAGGCGCGCGCGTGGCGCACGTGGCTCG
GCCGCGTGATGGCCGGCTCGCCCGAGCAGATCCAGATCATGTACGGGATCGCCGGCGAGCGCCGGCTGCCGGAAATGGAA
CTCGACTGGCTGCCCGGCTACCAGGATTCGAAACCGGTGCGCGTCGGCAACGGCGCCGCCAACCAGCTGCAGCTCGACGT
GTTCGGCGAGATCATGGCCGCGCTGCATCTCGCGCGCGTGGGCGGCCTGCAGGCCGACGACACGGTCTGGTCCGTGCAAT
GCGCGCTGCTCGATCATCTCGAGAAGATCTGGCAGGAGCCGGATGAAGGCATCTGGGAAACGCGCGGCGGACGCCGTCAT
TTCACGTTCTCGAAGGTGATGGCGTGGGTCGCGTTCGACCGCGCGATCAAGTCGGCGGAGATGTTCCGGCTGCCCGGCTC
GCTCGACCGCTGGCGCGCGCTGCGCGACCGGATTCATGCTGATGTATGCGACAACGCGTGGCATGAAGGCAAGCAGTCGT
TTGCACAAAGCTACGGCAGCGACGAGCTCGACGCGAGCGTGCTGCTGATGCCGCTGCTCGGCTTCTTGCCGCCGGAAGAC
CCGCGCATCGTCGGCACGGTCGAGGCGATCGAGCGGGAATTGCTGCACGACGGGCTCGTGATGCGCTACCGCACGACCGA
ATACGACGACGGCCTGCCGCCCGGCGAAGGCACGTTTCTCGCATGCAGCTTCTGGCTGGTCGACAATTACGCGCTGCTCG
GCCGAATCGACGACGCGCACCGGCTGTTCAGCCGGCTGCTCGCGCTGTCCAACGACCTCGGGCTGCTTGCCGAGGAGTAC
GACCCGGTCGAAGGGCGGCTCGTCGGCAATTTCCCGCAGGCGTTCTCGCACGTGGCGCTGGTGCATACCGCGATGAACCT
CATGCACCACGAAGATGCAATGGCGCGCGCGGCGGGCCAGCCGGCCCCCGCCCCGGCCATGGCGACGGGGCGCTGA

Upstream 100 bases:

>100_bases
TCCGCCGCCCGGCCGAGTATACGGGGCGCGACGCCGACACGTGAAGCCCGGGCGCCGCAGCCTGCATTGTGAACTCGAAT
AACCCAAGGACCGCTTGCCC

Downstream 100 bases:

>100_bases
CCGGCGGCGGCGCGGCTTCTTCAGAGATCGTCAATTCGCAAAAATTTGATGAAAAAACGGGGAAATGTTGCATTGCAACA
TTGATCGTTGTCCGATATGA

Product: glycoside hydrolase 15-like protein

Products: NA

Alternate protein names: Glycosyl Hydrolase; Glycosyl Hydrolase Family; Glycosy Hydrolase Family Protein; Glycoside Hydrolase Family; Trehalose-Phosphatase; Glucoamylase; Glycoside Hydrolase Family Protein; Trehalose-Phosphatase/Glycoside Hydrolase; Glucoamylase-Like Glycosyl Hydrolase; Trehalose Phosphatase; Glycosyl Hydrolase Glucoamylase; Glucoamylase Or Related Glycosyl Hydrolase; Six-Hairpin Glycosidase-Like Protein; Trehalose 6-Phosphatase; Trehalose-Phosphatase/ Glycoside Hydrolase; Glucoamylase Or Related Glycosyl Hydrolase Protein; HAD Family Hydrolase; Hydrolase; Glycosyl Hydrolase Glycosyl Hydrolase Family; Glycosyl Hydrolase Protein; Trehalose-6-Phosphate Phophatase

Number of amino acids: Translated: 611; Mature: 610

Protein sequence:

>611_residues
MPALIEDYALVGDGHTAALISKEGSVDWLCWPRFDSGACFAALVGTPEHGRWLLAPAADAAITHTSRRYRGDTLILETDY
ESADGAVTVIDFMPPGNGWSELVRIVVGRHGTMKMRMELVLRFDYGFSIPWVTQLSRENGVKAIAGPDTVVLRTPVELTG
KNLHTLAEFTVSADERIPFSLGYAASHLRLPPARDPLSMLARTENYWLEWSGRCQVQGRYAAAVRRSLITLKALAYEPTG
GIVAAPTTSLPEKIGGNRNWDYRYCWLRDATITLLALMRGGYYDEARAWRTWLGRVMAGSPEQIQIMYGIAGERRLPEME
LDWLPGYQDSKPVRVGNGAANQLQLDVFGEIMAALHLARVGGLQADDTVWSVQCALLDHLEKIWQEPDEGIWETRGGRRH
FTFSKVMAWVAFDRAIKSAEMFRLPGSLDRWRALRDRIHADVCDNAWHEGKQSFAQSYGSDELDASVLLMPLLGFLPPED
PRIVGTVEAIERELLHDGLVMRYRTTEYDDGLPPGEGTFLACSFWLVDNYALLGRIDDAHRLFSRLLALSNDLGLLAEEY
DPVEGRLVGNFPQAFSHVALVHTAMNLMHHEDAMARAAGQPAPAPAMATGR

Sequences:

>Translated_611_residues
MPALIEDYALVGDGHTAALISKEGSVDWLCWPRFDSGACFAALVGTPEHGRWLLAPAADAAITHTSRRYRGDTLILETDY
ESADGAVTVIDFMPPGNGWSELVRIVVGRHGTMKMRMELVLRFDYGFSIPWVTQLSRENGVKAIAGPDTVVLRTPVELTG
KNLHTLAEFTVSADERIPFSLGYAASHLRLPPARDPLSMLARTENYWLEWSGRCQVQGRYAAAVRRSLITLKALAYEPTG
GIVAAPTTSLPEKIGGNRNWDYRYCWLRDATITLLALMRGGYYDEARAWRTWLGRVMAGSPEQIQIMYGIAGERRLPEME
LDWLPGYQDSKPVRVGNGAANQLQLDVFGEIMAALHLARVGGLQADDTVWSVQCALLDHLEKIWQEPDEGIWETRGGRRH
FTFSKVMAWVAFDRAIKSAEMFRLPGSLDRWRALRDRIHADVCDNAWHEGKQSFAQSYGSDELDASVLLMPLLGFLPPED
PRIVGTVEAIERELLHDGLVMRYRTTEYDDGLPPGEGTFLACSFWLVDNYALLGRIDDAHRLFSRLLALSNDLGLLAEEY
DPVEGRLVGNFPQAFSHVALVHTAMNLMHHEDAMARAAGQPAPAPAMATGR
>Mature_610_residues
PALIEDYALVGDGHTAALISKEGSVDWLCWPRFDSGACFAALVGTPEHGRWLLAPAADAAITHTSRRYRGDTLILETDYE
SADGAVTVIDFMPPGNGWSELVRIVVGRHGTMKMRMELVLRFDYGFSIPWVTQLSRENGVKAIAGPDTVVLRTPVELTGK
NLHTLAEFTVSADERIPFSLGYAASHLRLPPARDPLSMLARTENYWLEWSGRCQVQGRYAAAVRRSLITLKALAYEPTGG
IVAAPTTSLPEKIGGNRNWDYRYCWLRDATITLLALMRGGYYDEARAWRTWLGRVMAGSPEQIQIMYGIAGERRLPEMEL
DWLPGYQDSKPVRVGNGAANQLQLDVFGEIMAALHLARVGGLQADDTVWSVQCALLDHLEKIWQEPDEGIWETRGGRRHF
TFSKVMAWVAFDRAIKSAEMFRLPGSLDRWRALRDRIHADVCDNAWHEGKQSFAQSYGSDELDASVLLMPLLGFLPPEDP
RIVGTVEAIERELLHDGLVMRYRTTEYDDGLPPGEGTFLACSFWLVDNYALLGRIDDAHRLFSRLLALSNDLGLLAEEYD
PVEGRLVGNFPQAFSHVALVHTAMNLMHHEDAMARAAGQPAPAPAMATGR

Specific function: Unknown

COG id: COG3387

COG function: function code G; Glucoamylase and related glycosyl hydrolases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 68004; Mature: 67873

Theoretical pI: Translated: 5.49; Mature: 5.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPALIEDYALVGDGHTAALISKEGSVDWLCWPRFDSGACFAALVGTPEHGRWLLAPAADA
CCCCCCCEEEECCCCEEEEEECCCCEEEEEECCCCCCCEEEEEECCCCCCCEEEECCCCH
AITHTSRRYRGDTLILETDYESADGAVTVIDFMPPGNGWSELVRIVVGRHGTMKMRMELV
HHHHCCHHCCCCEEEEEECCCCCCCCEEEEEECCCCCCHHHHHHHHHCCCCCCEEEEEEE
LRFDYGFSIPWVTQLSRENGVKAIAGPDTVVLRTPVELTGKNLHTLAEFTVSADERIPFS
EEECCCCCCCHHHHHHHHCCCEEECCCCEEEEECCHHHCCCCHHHHHHEEECCCCCCCEE
LGYAASHLRLPPARDPLSMLARTENYWLEWSGRCQVQGRYAAAVRRSLITLKALAYEPTG
ECCCHHHCCCCCCCCHHHHHHCCCCEEEEECCEEEECCHHHHHHHHHHHHHHHEEECCCC
GIVAAPTTSLPEKIGGNRNWDYRYCWLRDATITLLALMRGGYYDEARAWRTWLGRVMAGS
CEEECCCCCCHHHHCCCCCCCEEEEEEECHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC
PEQIQIMYGIAGERRLPEMELDWLPGYQDSKPVRVGNGAANQLQLDVFGEIMAALHLARV
CCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCEEEHHHHHHHHHHHHHHHH
GGLQADDTVWSVQCALLDHLEKIWQEPDEGIWETRGGRRHFTFSKVMAWVAFDRAIKSAE
CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCEEEHHHHHHHHHHHHHHHHHHH
MFRLPGSLDRWRALRDRIHADVCDNAWHEGKQSFAQSYGSDELDASVLLMPLLGFLPPED
HEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCC
PRIVGTVEAIERELLHDGLVMRYRTTEYDDGLPPGEGTFLACSFWLVDNYALLGRIDDAH
CEEEEHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCEEEEEEEEHHCEEEEECCCHHH
RLFSRLLALSNDLGLLAEEYDPVEGRLVGNFPQAFSHVALVHTAMNLMHHEDAMARAAGQ
HHHHHHHHHCCCCCCHHHCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PAPAPAMATGR
CCCCCCCCCCC
>Mature Secondary Structure 
PALIEDYALVGDGHTAALISKEGSVDWLCWPRFDSGACFAALVGTPEHGRWLLAPAADA
CCCCCCEEEECCCCEEEEEECCCCEEEEEECCCCCCCEEEEEECCCCCCCEEEECCCCH
AITHTSRRYRGDTLILETDYESADGAVTVIDFMPPGNGWSELVRIVVGRHGTMKMRMELV
HHHHCCHHCCCCEEEEEECCCCCCCCEEEEEECCCCCCHHHHHHHHHCCCCCCEEEEEEE
LRFDYGFSIPWVTQLSRENGVKAIAGPDTVVLRTPVELTGKNLHTLAEFTVSADERIPFS
EEECCCCCCCHHHHHHHHCCCEEECCCCEEEEECCHHHCCCCHHHHHHEEECCCCCCCEE
LGYAASHLRLPPARDPLSMLARTENYWLEWSGRCQVQGRYAAAVRRSLITLKALAYEPTG
ECCCHHHCCCCCCCCHHHHHHCCCCEEEEECCEEEECCHHHHHHHHHHHHHHHEEECCCC
GIVAAPTTSLPEKIGGNRNWDYRYCWLRDATITLLALMRGGYYDEARAWRTWLGRVMAGS
CEEECCCCCCHHHHCCCCCCCEEEEEEECHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC
PEQIQIMYGIAGERRLPEMELDWLPGYQDSKPVRVGNGAANQLQLDVFGEIMAALHLARV
CCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCEEEHHHHHHHHHHHHHHHH
GGLQADDTVWSVQCALLDHLEKIWQEPDEGIWETRGGRRHFTFSKVMAWVAFDRAIKSAE
CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCEEEHHHHHHHHHHHHHHHHHHH
MFRLPGSLDRWRALRDRIHADVCDNAWHEGKQSFAQSYGSDELDASVLLMPLLGFLPPED
HEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCC
PRIVGTVEAIERELLHDGLVMRYRTTEYDDGLPPGEGTFLACSFWLVDNYALLGRIDDAH
CEEEEHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCEEEEEEEEHHCEEEEECCCHHH
RLFSRLLALSNDLGLLAEEYDPVEGRLVGNFPQAFSHVALVHTAMNLMHHEDAMARAAGQ
HHHHHHHHHCCCCCCHHHCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PAPAPAMATGR
CCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA