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The map label for this gene is 115352414

Identifier: 115352414

GI number: 115352414

Start: 2609794

End: 2611275

Strand: Direct

Name: 115352414

Synonym: Bamb_2363

Alternate gene names: NA

Gene position: 2609794-2611275 (Clockwise)

Preceding gene: 115352413

Following gene: 115352416

Centisome position: 73.38

GC content: 66.26

Gene sequence:

>1482_bases
ATGCTTTACCAACTGCACGAATTCCAGCGGGCCATGTTGAGCCCGCTTACGGCCTGGGCCCAGGCCGCCTCCAAGTCGTT
CGCCAATCCGTCCAGCCCGTTCTCGCTGATGCCCGGCGCGACGCGGATGGCCGCCGCTTACGAGCTGATGTACCGGCTCG
GCAAGGATTACGAGAAGCCCGAATTCAACCTGCACCAGATCGTCAAGGACGGCCACAACATCCCGATCGTCGAGCAGACG
ATCGTCGAGAAGCCGTTCTGCCGGCTGCTGCGCTTCAAGCGCTATTCGGATGACGCCGACGCCGTCACGCAACTGAAGGA
CGAGCCGGTCGTGCTGGTCTGCGCGCCGCTGTCGGGCCACCATTCGACGCTGCTGCGCGATACCGTGCGCACGCTGCTGC
AGGATCACAAGGTGTACATCACCGACTGGATCGACGCGCGGATGGTGCCGGTCGAGGTCGGCCCGTTCCACCTGCACGAC
TACGTCGCGTACATCCAGGAATTCATTCGTCATATCGGCGCGCGCAACCTGCACGTGATCTCCGTGTGCCAGCCGACGGT
GCCGGTGCTCGCGGCGATCTCGCTGATGGCGAGCCGCGGCGAGGACACCCCGCTCACGATGACGATGATGGGCGGCCCGA
TCGACGCGCGCCGCAGCCCGACCTCGGTGAACTCGCTCGCGACGCAGCACTCGACCTCGTGGTTCGAAAACAACGTGATC
CACACGGTGCCCGCGAATTATCCGGGCGAAGGCCGTCACGTGTATCCGGGCTTCCTGCAACACACGGGCTTCGTCGCGAT
GAACCCGGAACGCCACGCGCAATCGCACTGGGATTTCTACCAGAGCCTGCTGCGCGGCGACGAGGAAGACGCCGAAGCGC
ACCGCCAGTTCTACGACGAATACAACGCGGTGCTCGACATGGCCGCCGAGTACTACCTCGAGACGATCCGCGTCGTGTTC
CAGGAATTCCGGCTCGCGGAAGGCACGTGGGATGTCGAAGGCGAGCGCGTGCGTCCGCAGGACATCAAGCACACCGCGCT
GATGACGATCGAAGGCGAGCTCGACGATATCTCGGGCAGCGGCCAGACGCACGTCGCGCACGAGCTGTGCACGGGCATCC
CGCAGGACGATCGCCGCAGCCTGACCGCGGAGAAGTGCGGTCACTACGGGATCTTCTCGGGCCGCCGCTGGCGCACGATC
ATCTACCCGCAACTGCGCGACTTCATCCGCGAGCATGCGCCGGAACCGAAGAACGGCATGGCGAAGAAGCCCACCGAGGC
ACCGGTCACGACGACGCTCGCCGCCGTGCCGTCCAGCAAGCAGCCCGAAACGACCCGCGCCACCGTCGCGAAACGCGTGC
GCGCGAAGGCACCGGCCGCCACCGTTGCTCCCGCCCGGACGCCAGCCGCGAAGGCCGCGCCCGCCGCGAAAAGCGCGGGC
AGCACACGGGCGAAATCCCTTCGCGCGCGCAAGGCGGCCTGA

Upstream 100 bases:

>100_bases
GTCCGGCCGCACTGCAATATGGCCGGTCGCTGACCCACACGGCACGCCGCGACGCACCACACCGCCCCTGCGCACCGTCC
CCCAAGCGGGAGTAGTCTGC

Downstream 100 bases:

>100_bases
CACGCCGCATTCCGACGCAAAAACGCCGCCGTGGCTTGTATGCACGGCGGCGTTTTCTTATGCAGCGGGCGGCCGCGAGC
GGGCCGCGCATCGGCGCACG

Product: polyhydroxyalkanoate depolymerase

Products: NA

Alternate protein names: Intracellular PHB Depolymerase; Polyhydroxyalkanoate Depolymerase; Poly-Beta-Hydroxyalkanoate Depolymerase; PHB Depolymerase; PHB De-Polymerase Domain-Containing Protein; Poly[D(-)-3-Hydroxybutyrate] Depolymerase; Intracellular Poly(3-Hydroxybutyrate) Depolymerase; Intracellular Polyhydroxyalkanoate Depolymerase; Polyhydroxyalkanoate Depolymerase Intracellular Subfamily; Poly(3-Hydroxyalkanoate) Depolymerase; Poly(3-Hydroxybutyrate) Depolymerase; Alpha/Beta Hydrolase Fold; Alpha/Beta Hydrolase Fold Protein; Intracellular PHB Depolymerase Protein; Poly-Beta-Hydroxyalkanoate Depolymerase-Like Protein; PHB De-Polymerase Domain Protein; PHB De-Polymerase; Intracellular Poly[D(-)-3-Hydroxybutyrate] Depolymerase; Poly[D(-)-3-Hydroxybutyrate](Phb) Depolymerase; Poly-Beta-Hydroxyalkanoate/Butyrate Depolymerase; Poly-Beta-Hydroxyalkanoate Depolymerase Protein; Poly[D(-)-3-Hydroxyalkanoate] Depolymerase; Polyhydroxybutanoate Depolymerase; Poly-Beta-Hydroxybutyrate Depolymerase

Number of amino acids: Translated: 493; Mature: 493

Protein sequence:

>493_residues
MLYQLHEFQRAMLSPLTAWAQAASKSFANPSSPFSLMPGATRMAAAYELMYRLGKDYEKPEFNLHQIVKDGHNIPIVEQT
IVEKPFCRLLRFKRYSDDADAVTQLKDEPVVLVCAPLSGHHSTLLRDTVRTLLQDHKVYITDWIDARMVPVEVGPFHLHD
YVAYIQEFIRHIGARNLHVISVCQPTVPVLAAISLMASRGEDTPLTMTMMGGPIDARRSPTSVNSLATQHSTSWFENNVI
HTVPANYPGEGRHVYPGFLQHTGFVAMNPERHAQSHWDFYQSLLRGDEEDAEAHRQFYDEYNAVLDMAAEYYLETIRVVF
QEFRLAEGTWDVEGERVRPQDIKHTALMTIEGELDDISGSGQTHVAHELCTGIPQDDRRSLTAEKCGHYGIFSGRRWRTI
IYPQLRDFIREHAPEPKNGMAKKPTEAPVTTTLAAVPSSKQPETTRATVAKRVRAKAPAATVAPARTPAAKAAPAAKSAG
STRAKSLRARKAA

Sequences:

>Translated_493_residues
MLYQLHEFQRAMLSPLTAWAQAASKSFANPSSPFSLMPGATRMAAAYELMYRLGKDYEKPEFNLHQIVKDGHNIPIVEQT
IVEKPFCRLLRFKRYSDDADAVTQLKDEPVVLVCAPLSGHHSTLLRDTVRTLLQDHKVYITDWIDARMVPVEVGPFHLHD
YVAYIQEFIRHIGARNLHVISVCQPTVPVLAAISLMASRGEDTPLTMTMMGGPIDARRSPTSVNSLATQHSTSWFENNVI
HTVPANYPGEGRHVYPGFLQHTGFVAMNPERHAQSHWDFYQSLLRGDEEDAEAHRQFYDEYNAVLDMAAEYYLETIRVVF
QEFRLAEGTWDVEGERVRPQDIKHTALMTIEGELDDISGSGQTHVAHELCTGIPQDDRRSLTAEKCGHYGIFSGRRWRTI
IYPQLRDFIREHAPEPKNGMAKKPTEAPVTTTLAAVPSSKQPETTRATVAKRVRAKAPAATVAPARTPAAKAAPAAKSAG
STRAKSLRARKAA
>Mature_493_residues
MLYQLHEFQRAMLSPLTAWAQAASKSFANPSSPFSLMPGATRMAAAYELMYRLGKDYEKPEFNLHQIVKDGHNIPIVEQT
IVEKPFCRLLRFKRYSDDADAVTQLKDEPVVLVCAPLSGHHSTLLRDTVRTLLQDHKVYITDWIDARMVPVEVGPFHLHD
YVAYIQEFIRHIGARNLHVISVCQPTVPVLAAISLMASRGEDTPLTMTMMGGPIDARRSPTSVNSLATQHSTSWFENNVI
HTVPANYPGEGRHVYPGFLQHTGFVAMNPERHAQSHWDFYQSLLRGDEEDAEAHRQFYDEYNAVLDMAAEYYLETIRVVF
QEFRLAEGTWDVEGERVRPQDIKHTALMTIEGELDDISGSGQTHVAHELCTGIPQDDRRSLTAEKCGHYGIFSGRRWRTI
IYPQLRDFIREHAPEPKNGMAKKPTEAPVTTTLAAVPSSKQPETTRATVAKRVRAKAPAATVAPARTPAAKAAPAAKSAG
STRAKSLRARKAA

Specific function: Unknown

COG id: COG4553

COG function: function code I; Poly-beta-hydroxyalkanoate depolymerase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.1.1.-

Molecular weight: Translated: 55159; Mature: 55159

Theoretical pI: Translated: 7.80; Mature: 7.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLYQLHEFQRAMLSPLTAWAQAASKSFANPSSPFSLMPGATRMAAAYELMYRLGKDYEKP
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCHHHHHHHHHHHHHHCCCCCCC
EFNLHQIVKDGHNIPIVEQTIVEKPFCRLLRFKRYSDDADAVTQLKDEPVVLVCAPLSGH
CCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCEEEEEECCCCC
HSTLLRDTVRTLLQDHKVYITDWIDARMVPVEVGPFHLHDYVAYIQEFIRHIGARNLHVI
HHHHHHHHHHHHHHCCCEEEEECCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCCEEEE
SVCQPTVPVLAAISLMASRGEDTPLTMTMMGGPIDARRSPTSVNSLATQHSTSWFENNVI
EECCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHCCHHHHCCCE
HTVPANYPGEGRHVYPGFLQHTGFVAMNPERHAQSHWDFYQSLLRGDEEDAEAHRQFYDE
EECCCCCCCCCCEECCHHHHHCCEEEECCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
YNAVLDMAAEYYLETIRVVFQEFRLAEGTWDVEGERVRPQDIKHTALMTIEGELDDISGS
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCC
GQTHVAHELCTGIPQDDRRSLTAEKCGHYGIFSGRRWRTIIYPQLRDFIREHAPEPKNGM
CCHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCEEEEECHHHHHHHHHHCCCCCCCC
AKKPTEAPVTTTLAAVPSSKQPETTRATVAKRVRAKAPAATVAPARTPAAKAAPAAKSAG
CCCCCCCCHHHHHEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHCCCCHHCCC
STRAKSLRARKAA
CHHHHHHHHHCCC
>Mature Secondary Structure
MLYQLHEFQRAMLSPLTAWAQAASKSFANPSSPFSLMPGATRMAAAYELMYRLGKDYEKP
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCHHHHHHHHHHHHHHCCCCCCC
EFNLHQIVKDGHNIPIVEQTIVEKPFCRLLRFKRYSDDADAVTQLKDEPVVLVCAPLSGH
CCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCEEEEEECCCCC
HSTLLRDTVRTLLQDHKVYITDWIDARMVPVEVGPFHLHDYVAYIQEFIRHIGARNLHVI
HHHHHHHHHHHHHHCCCEEEEECCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCCEEEE
SVCQPTVPVLAAISLMASRGEDTPLTMTMMGGPIDARRSPTSVNSLATQHSTSWFENNVI
EECCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHCCHHHHCCCE
HTVPANYPGEGRHVYPGFLQHTGFVAMNPERHAQSHWDFYQSLLRGDEEDAEAHRQFYDE
EECCCCCCCCCCEECCHHHHHCCEEEECCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
YNAVLDMAAEYYLETIRVVFQEFRLAEGTWDVEGERVRPQDIKHTALMTIEGELDDISGS
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCC
GQTHVAHELCTGIPQDDRRSLTAEKCGHYGIFSGRRWRTIIYPQLRDFIREHAPEPKNGM
CCHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCEEEEECHHHHHHHHHHCCCCCCCC
AKKPTEAPVTTTLAAVPSSKQPETTRATVAKRVRAKAPAATVAPARTPAAKAAPAAKSAG
CCCCCCCCHHHHHEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHCCCCHHCCC
STRAKSLRARKAA
CHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA