| Definition | Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008390 |
| Length | 3,556,545 |
Click here to switch to the map view.
The map label for this gene is 115352359
Identifier: 115352359
GI number: 115352359
Start: 2544056
End: 2545048
Strand: Direct
Name: 115352359
Synonym: Bamb_2308
Alternate gene names: NA
Gene position: 2544056-2545048 (Clockwise)
Preceding gene: 115352358
Following gene: 115352360
Centisome position: 71.53
GC content: 65.86
Gene sequence:
>993_bases ATGGTCACGCCCACATGGCGCAATGCCGGTAATGTCAATCGGCGCGAGTCATGCATGGGCCAGAAAACGTCCGCGACCTC CCTGTTCCGTCAACCGCTCGGCGCCCGCGCCGTCACCGCCTTCGTGTCCGGCTCGGCCGCAACCGATGCCCTGTCGGCGC ACGAGCCGCCGACCGCGCACGCGACGCAGCACGACGACCCCGAACCGTCCGCGCATCGTTATCGCACGATCTGGCTGTCC GACATCCATCTCGGCTCCAGCGGCTGCCAGGCGCCGTACCTGCTCGACTTCCTGCGCCACAACGATTCGGAGTACCTGTA CCTCGTCGGCGACATCATCGACGGCTGGCAGCTGAAGAAGGGCTGGTACTGGCCGCAGGCGCACAACGACGTGGTGCAGA AGGTCCTGCGCAAGGCACGCAAGGGCACGCAGGTGGTCTACATCCCGGGCAACCACGACGAAGGCGCGCGGCAGTTCTGC GACCTCGCGTTCGGCGACATCCAGGTGCGCGGCGAGGCATTTCACACGACGCTCGCGGGCAAGCGTCTGTGGATCGTGCA CGGCGACCTGTTCGACGGCGTGATCCAGCACGCGAAATGGCTCGCATATCTCGGCGACACGCTCTACACGCTGATCCTCG TGCTGAACCGCTGGTTCAACCGGATCCGCAGCCGGCTCGGCTTCCAGTACTGGTCGCTGTCGCAGTACCTGAAGCACCAG GTGAAGAACGCGGTGAACTTCATCTCGCAGTTCGAGACCGTGATGACCGACGAAGCGCGCCGCCGCGGCTGCGACGGCGT CGTGTGCGGGCACATCCACAAGGCCGAGATCCGCGACATCGACGGCGTGCTGTACTGCAACGACGGCGACTGGGTCGAGA GCCTGTCCGCCCTCGTCGAAACGATGGAAGGCGAACTGAAGATCGTCTACTGGACGGCGATGCGCACCGCGCCGTCCGCA GCCCCGTCGCGCAAGGCCAAGGCCACCGCCTGA
Upstream 100 bases:
>100_bases GCGACAGGCCCGTCGGTTCGGCAGGTTGCACAACCCCGCCCCATTCACCGCTAAACACGCCGCGACGACAGTAATAAGAA CGTCTCGTGACTGTCACGGC
Downstream 100 bases:
>100_bases CACAACTCCACTTACAGGACACAGCCGCGATGAAGATCATGATCGTCACCGATGCATGGGAACCGCAGGTCAACGGCGTC GTGCGCACGCTCAAGAGCAC
Product: metallophosphoesterase
Products: NA
Alternate protein names: Ser/Thr Protein Phosphatase Family Protein; Calcineurin-Like Phosphoesterase; UDP-2 3-Diacylglucosamine Hydrolase; Metallo-Phosphoesterase; Metallo-Phosphoesterase Protein; Phosphoesterase; Metallophosphoesterase Family Protein; Calcineurin Phosphohydrolase Superfamily Protein; Calcineurin-Like Phosphoesterase Family; Metallo-Dependent Phosphoesterase; Metallophosphoesterase Protein
Number of amino acids: Translated: 330; Mature: 330
Protein sequence:
>330_residues MVTPTWRNAGNVNRRESCMGQKTSATSLFRQPLGARAVTAFVSGSAATDALSAHEPPTAHATQHDDPEPSAHRYRTIWLS DIHLGSSGCQAPYLLDFLRHNDSEYLYLVGDIIDGWQLKKGWYWPQAHNDVVQKVLRKARKGTQVVYIPGNHDEGARQFC DLAFGDIQVRGEAFHTTLAGKRLWIVHGDLFDGVIQHAKWLAYLGDTLYTLILVLNRWFNRIRSRLGFQYWSLSQYLKHQ VKNAVNFISQFETVMTDEARRRGCDGVVCGHIHKAEIRDIDGVLYCNDGDWVESLSALVETMEGELKIVYWTAMRTAPSA APSRKAKATA
Sequences:
>Translated_330_residues MVTPTWRNAGNVNRRESCMGQKTSATSLFRQPLGARAVTAFVSGSAATDALSAHEPPTAHATQHDDPEPSAHRYRTIWLS DIHLGSSGCQAPYLLDFLRHNDSEYLYLVGDIIDGWQLKKGWYWPQAHNDVVQKVLRKARKGTQVVYIPGNHDEGARQFC DLAFGDIQVRGEAFHTTLAGKRLWIVHGDLFDGVIQHAKWLAYLGDTLYTLILVLNRWFNRIRSRLGFQYWSLSQYLKHQ VKNAVNFISQFETVMTDEARRRGCDGVVCGHIHKAEIRDIDGVLYCNDGDWVESLSALVETMEGELKIVYWTAMRTAPSA APSRKAKATA >Mature_330_residues MVTPTWRNAGNVNRRESCMGQKTSATSLFRQPLGARAVTAFVSGSAATDALSAHEPPTAHATQHDDPEPSAHRYRTIWLS DIHLGSSGCQAPYLLDFLRHNDSEYLYLVGDIIDGWQLKKGWYWPQAHNDVVQKVLRKARKGTQVVYIPGNHDEGARQFC DLAFGDIQVRGEAFHTTLAGKRLWIVHGDLFDGVIQHAKWLAYLGDTLYTLILVLNRWFNRIRSRLGFQYWSLSQYLKHQ VKNAVNFISQFETVMTDEARRRGCDGVVCGHIHKAEIRDIDGVLYCNDGDWVESLSALVETMEGELKIVYWTAMRTAPSA APSRKAKATA
Specific function: Unknown
COG id: COG2908
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37202; Mature: 37202
Theoretical pI: Translated: 8.37; Mature: 8.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVTPTWRNAGNVNRRESCMGQKTSATSLFRQPLGARAVTAFVSGSAATDALSAHEPPTAH CCCCCCCCCCCCCHHHHHCCCCHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHCCCCCCCC ATQHDDPEPSAHRYRTIWLSDIHLGSSGCQAPYLLDFLRHNDSEYLYLVGDIIDGWQLKK CCCCCCCCCCCCCEEEEEEEEEEECCCCCCCHHHHHHHHCCCCCEEEEEECCCCCEEECC GWYWPQAHNDVVQKVLRKARKGTQVVYIPGNHDEGARQFCDLAFGDIQVRGEAFHTTLAG CCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHCCEEECCHHHHHHHCC KRLWIVHGDLFDGVIQHAKWLAYLGDTLYTLILVLNRWFNRIRSRLGFQYWSLSQYLKHQ CEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH VKNAVNFISQFETVMTDEARRRGCDGVVCGHIHKAEIRDIDGVLYCNDGDWVESLSALVE HHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHCCCCCEEEECCCHHHHHHHHHHH TMEGELKIVYWTAMRTAPSAAPSRKAKATA HCCCCEEEEEEEEECCCCCCCCCCCCCCCC >Mature Secondary Structure MVTPTWRNAGNVNRRESCMGQKTSATSLFRQPLGARAVTAFVSGSAATDALSAHEPPTAH CCCCCCCCCCCCCHHHHHCCCCHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHCCCCCCCC ATQHDDPEPSAHRYRTIWLSDIHLGSSGCQAPYLLDFLRHNDSEYLYLVGDIIDGWQLKK CCCCCCCCCCCCCEEEEEEEEEEECCCCCCCHHHHHHHHCCCCCEEEEEECCCCCEEECC GWYWPQAHNDVVQKVLRKARKGTQVVYIPGNHDEGARQFCDLAFGDIQVRGEAFHTTLAG CCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHCCEEECCHHHHHHHCC KRLWIVHGDLFDGVIQHAKWLAYLGDTLYTLILVLNRWFNRIRSRLGFQYWSLSQYLKHQ CEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH VKNAVNFISQFETVMTDEARRRGCDGVVCGHIHKAEIRDIDGVLYCNDGDWVESLSALVE HHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHCCCCCEEEECCCHHHHHHHHHHH TMEGELKIVYWTAMRTAPSAAPSRKAKATA HCCCCEEEEEEEEECCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA