| Definition | Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008390 |
| Length | 3,556,545 |
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The map label for this gene is mgtA [H]
Identifier: 115352360
GI number: 115352360
Start: 2545078
End: 2546112
Strand: Direct
Name: mgtA [H]
Synonym: Bamb_2309
Alternate gene names: 115352360
Gene position: 2545078-2546112 (Clockwise)
Preceding gene: 115352359
Following gene: 115352361
Centisome position: 71.56
GC content: 67.25
Gene sequence:
>1035_bases ATGAAGATCATGATCGTCACCGATGCATGGGAACCGCAGGTCAACGGCGTCGTGCGCACGCTCAAGAGCACCTCCCGCGA ACTCACCGCGCTCGGCCACCGGGTCGAAATGCTGACGCCGCTGGAATTCCGCACGGTGCCCTGCCCGACCTACCCCGAGA TCCGCCTGTCGATCCTGCCGTACCGCAAGCTGCGCGCGCGCATCGATGCGTTCGCACCCGACGCGCTGCACATCGCGACC GAAGGCCCGCTCGGCCTCGCCGCGCGACGCTATGCACGCTCGCGCAAGCTGCCGTACACGACCGCGTATCACACGCGCTT TCCGGAATACGTGCAGGCGCGCTTCGGCATCCCGCTGTCGGCGACCTACAAGTTCCTGCACTGGTTCCACGGGCCGTCGC TCGCGGTGATGGCGCCGACCCCGGTCGTGAAGCAGGATCTCGAGAAGTTCGGATTCACGAACGTCGTGCTGTGGACGCGC GGCGTCGATCTCGAGATCTTCCGGCCGATGGAGTCGAAGGTGCTCAACACCGCGCGGCCGATTTTCCTGTACGTGGGCCG CGTCGCGATCGAGAAGAATGTCGAGGCGTTCCTGCGTCTCGACCTGCCCGGCTCGAAGTGGGTCGCGGGCGAAGGCCCGG CGCTCGCCGAGCTGAAATCGCGCTATCCGGAAGCGAACTATCTCGGCGTACTGTCGCAAGCCGAGCTCGCCAAGGTGTAT GCTGCGGCCGACGTGTTCGTATTCCCGAGTCGCACCGACACGTTCGGCCTCGTGCTGCTGGAGGCGCTCGCGTGCGGCAC GCCGGTCGCCGCTTACCCCGTGACGGGCCCGATCGACGTGCTCGGCGGGGGCGCTGCCGGCGCGATGCACGAAGACCTGC AGGAAGCCTGCCTCGAGGCGCTGAAGATCGAACGCGACACTGCCCGCGCGTGGGCCGAGCGCTTCTCGTGGCGCGCGGCG TCCGAGCAGTTCGCATCGCATCTGAAGCCGCTGCCAAAGACCGCGTACTCGCCCGCCGAAGGTGCCGCCGTTTGA
Upstream 100 bases:
>100_bases TCGTCTACTGGACGGCGATGCGCACCGCGCCGTCCGCAGCCCCGTCGCGCAAGGCCAAGGCCACCGCCTGACACAACTCC ACTTACAGGACACAGCCGCG
Downstream 100 bases:
>100_bases AACGAGACCTGAACGACAAGACCCCCGACGCTGCCGCGACAGCGCAACTGCATCATCCGTTCGATGAAGAAGAGCCGCAC GCCGATGCGGACGTGCACAC
Product: group 1 glycosyl transferase
Products: NA
Alternate protein names: Guanosine diphosphomannose-dependent alpha-mannosyltransferase [H]
Number of amino acids: Translated: 344; Mature: 344
Protein sequence:
>344_residues MKIMIVTDAWEPQVNGVVRTLKSTSRELTALGHRVEMLTPLEFRTVPCPTYPEIRLSILPYRKLRARIDAFAPDALHIAT EGPLGLAARRYARSRKLPYTTAYHTRFPEYVQARFGIPLSATYKFLHWFHGPSLAVMAPTPVVKQDLEKFGFTNVVLWTR GVDLEIFRPMESKVLNTARPIFLYVGRVAIEKNVEAFLRLDLPGSKWVAGEGPALAELKSRYPEANYLGVLSQAELAKVY AAADVFVFPSRTDTFGLVLLEALACGTPVAAYPVTGPIDVLGGGAAGAMHEDLQEACLEALKIERDTARAWAERFSWRAA SEQFASHLKPLPKTAYSPAEGAAV
Sequences:
>Translated_344_residues MKIMIVTDAWEPQVNGVVRTLKSTSRELTALGHRVEMLTPLEFRTVPCPTYPEIRLSILPYRKLRARIDAFAPDALHIAT EGPLGLAARRYARSRKLPYTTAYHTRFPEYVQARFGIPLSATYKFLHWFHGPSLAVMAPTPVVKQDLEKFGFTNVVLWTR GVDLEIFRPMESKVLNTARPIFLYVGRVAIEKNVEAFLRLDLPGSKWVAGEGPALAELKSRYPEANYLGVLSQAELAKVY AAADVFVFPSRTDTFGLVLLEALACGTPVAAYPVTGPIDVLGGGAAGAMHEDLQEACLEALKIERDTARAWAERFSWRAA SEQFASHLKPLPKTAYSPAEGAAV >Mature_344_residues MKIMIVTDAWEPQVNGVVRTLKSTSRELTALGHRVEMLTPLEFRTVPCPTYPEIRLSILPYRKLRARIDAFAPDALHIAT EGPLGLAARRYARSRKLPYTTAYHTRFPEYVQARFGIPLSATYKFLHWFHGPSLAVMAPTPVVKQDLEKFGFTNVVLWTR GVDLEIFRPMESKVLNTARPIFLYVGRVAIEKNVEAFLRLDLPGSKWVAGEGPALAELKSRYPEANYLGVLSQAELAKVY AAADVFVFPSRTDTFGLVLLEALACGTPVAAYPVTGPIDVLGGGAAGAMHEDLQEACLEALKIERDTARAWAERFSWRAA SEQFASHLKPLPKTAYSPAEGAAV
Specific function: Catalyzes the addition of a mannose residue from GDP-D- mannose to GlcAGroAc2 to generate 1,2-di-O-C16/C18:1-(alpha-D- mannopyranosyl)-(1-4)-(alpha-D-glucopyranosyluronic acid)-(1-3)- glycerol(ManGlcAGroAc2) [H]
COG id: COG0438
COG function: function code M; Glycosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 1 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001296 [H]
Pfam domain/function: PF00534 Glycos_transf_1 [H]
EC number: NA
Molecular weight: Translated: 38057; Mature: 38057
Theoretical pI: Translated: 9.18; Mature: 9.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIMIVTDAWEPQVNGVVRTLKSTSRELTALGHRVEMLTPLEFRTVPCPTYPEIRLSILP CEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHEEECCCCEEECCCCCCCCEEEEECC YRKLRARIDAFAPDALHIATEGPLGLAARRYARSRKLPYTTAYHTRFPEYVQARFGIPLS HHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHCCCCCEEHHHCCCHHHHHHHCCCCHH ATYKFLHWFHGPSLAVMAPTPVVKQDLEKFGFTNVVLWTRGVDLEIFRPMESKVLNTARP HHHHHHHHHCCCCEEEECCCHHHHHHHHHCCCCEEEEEECCCCEEEECCHHHHHHHCCCC IFLYVGRVAIEKNVEAFLRLDLPGSKWVAGEGPALAELKSRYPEANYLGVLSQAELAKVY HHHHHHHHHHHCCCEEEEEEECCCCCEECCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHH AAADVFVFPSRTDTFGLVLLEALACGTPVAAYPVTGPIDVLGGGAAGAMHEDLQEACLEA HHHEEEEECCCCCHHHHHHHHHHHCCCCCEECCCCCCHHHCCCCCCHHHHHHHHHHHHHH LKIERDTARAWAERFSWRAASEQFASHLKPLPKTAYSPAEGAAV HHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKIMIVTDAWEPQVNGVVRTLKSTSRELTALGHRVEMLTPLEFRTVPCPTYPEIRLSILP CEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHEEECCCCEEECCCCCCCCEEEEECC YRKLRARIDAFAPDALHIATEGPLGLAARRYARSRKLPYTTAYHTRFPEYVQARFGIPLS HHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHCCCCCEEHHHCCCHHHHHHHCCCCHH ATYKFLHWFHGPSLAVMAPTPVVKQDLEKFGFTNVVLWTRGVDLEIFRPMESKVLNTARP HHHHHHHHHCCCCEEEECCCHHHHHHHHHCCCCEEEEEECCCCEEEECCHHHHHHHCCCC IFLYVGRVAIEKNVEAFLRLDLPGSKWVAGEGPALAELKSRYPEANYLGVLSQAELAKVY HHHHHHHHHHHCCCEEEEEEECCCCCEECCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHH AAADVFVFPSRTDTFGLVLLEALACGTPVAAYPVTGPIDVLGGGAAGAMHEDLQEACLEA HHHEEEEECCCCCHHHHHHHHHHHCCCCCEECCCCCCHHHCCCCCCHHHHHHHHHHHHHH LKIERDTARAWAERFSWRAASEQFASHLKPLPKTAYSPAEGAAV HHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12948626 [H]