Definition Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence.
Accession NC_008390
Length 3,556,545

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The map label for this gene is 115352307

Identifier: 115352307

GI number: 115352307

Start: 2493561

End: 2494859

Strand: Direct

Name: 115352307

Synonym: Bamb_2256

Alternate gene names: NA

Gene position: 2493561-2494859 (Clockwise)

Preceding gene: 115352303

Following gene: 115352308

Centisome position: 70.11

GC content: 65.51

Gene sequence:

>1299_bases
ATGCCGAAGCACAAGGCCGCTTATGGTGCAAAGAACGGACTAGAATGTGAGGCTCTTCGCCCCTTTCTATACGTATTTAA
TATGCGCCAGCGAATCGCCAAACGCCTCCCCCCCGACGCCGACAAACTGGTCGGCCTGTCGCTTGCGCTCTTCGCCTCGG
GCAGCCGCATCGAGGATCGCTTCTGGGAAGCGAAGCTCGACGCACTGCTCGCCAAGATCGTTCGCAATGGCAACCAGACC
ACGCTCGACGCGGCACTCGACCATCTGCAGCAGAACCACCCCGATGCCTATGGCGCGCTCGCCGACATGGCCGAGACGCA
CAGTGAATCGATGGTGATCGAGCACGACGGCCAGCCGTACGATGCACTGCTGGTTGCCGTCCCCGTTCTTGCGTGGACGC
GCTACATGATTCCGTCAGGCTCGCTGAAAGGCGATGTCGCCGACGCACTGCGCACGCAACTGCAGGCGCACGTGCTCGCG
AGCGGCACGCTCGTCGGACTGGCCCCGTTCCTGTACAGCATCGACCAGCTGCCGCGCCACCACGTCGAGACCTACCGGCT
CGTCCAGCAACTCGCGCATGCAGCAATCGGCCAGCACGCCGCCAAGCTGAGCTTCGGCGACCTGCCCGAAACTTCGCCGA
TCCTCGCCGACCCGCGCTTCCTGCTCGCCGTGGTGGCCGCGCCGGCCGGTGCACCGCTGTTCCGCTGGCAGGAAGAAGAG
CACGGCAACCGGATCGAACGCGGCCAGTGTCTCGAGCAGTGGACCGCCCAGGGCGGCCCGAGCCTGTCGGTCGCCCTCCC
CGGCTGCGAGTTCGAATGCCTGCTTCCGGACGCGTACTACTCGGCCTGCCGCGATGCGGACGAGAGGATCCGTCCGCACA
CGGTCCGAACGGCCATCCGTTATCTTTTCGACACACTTGGTGCGGCACCGCAAGAACTTCGCGCCGTGGTCGCGGGCTTC
GGCGAGCGCCGGATCGACGAGTATCGCGTCGGCTTCACGCGACGTGCCAGCAACGACGTGATCTATGGCGTCGTGTGGCC
TCTGTACGGCCGCGAGAACGGCGACGTGTCGACCGACAACGCGACGCTCGAAGGCGAAGCGCCGATGGAAGGGCCGATGG
AGGAAATCGTGAGTCTGCTGAAGGAATGCGGCGTAACCGACGTCCGGCGGCACGCAGGCCGCTTCGAGCCCGAGTACTGC
GACGACTGCGGCGTGCCGCTCTATGCGGACCCCCTCGGCGAGATCGTCCACGCCGAAATGCCGGAAGACGCATCGCCGGC
CCAGCCGCACTTTCACTGA

Upstream 100 bases:

>100_bases
TCCGTTAGCGCGAAAGAGGCGTGATTCTAAGCACCCGCCTCGAACTGCGCAAGGGGTTTGATGGATTTTTCTTCACCCCC
GTCGAGACGGCCTTCCGGCC

Downstream 100 bases:

>100_bases
TCCGCGCACCGCAGGCTCGTCGAGCCTGCCCGACCAAGCCGCTCCCGGTTCCTGCCGGAGCGGCTTTTTTTCGCCCGCAT
TTTCCCTCCGCTCAAAATTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 432; Mature: 431

Protein sequence:

>432_residues
MPKHKAAYGAKNGLECEALRPFLYVFNMRQRIAKRLPPDADKLVGLSLALFASGSRIEDRFWEAKLDALLAKIVRNGNQT
TLDAALDHLQQNHPDAYGALADMAETHSESMVIEHDGQPYDALLVAVPVLAWTRYMIPSGSLKGDVADALRTQLQAHVLA
SGTLVGLAPFLYSIDQLPRHHVETYRLVQQLAHAAIGQHAAKLSFGDLPETSPILADPRFLLAVVAAPAGAPLFRWQEEE
HGNRIERGQCLEQWTAQGGPSLSVALPGCEFECLLPDAYYSACRDADERIRPHTVRTAIRYLFDTLGAAPQELRAVVAGF
GERRIDEYRVGFTRRASNDVIYGVVWPLYGRENGDVSTDNATLEGEAPMEGPMEEIVSLLKECGVTDVRRHAGRFEPEYC
DDCGVPLYADPLGEIVHAEMPEDASPAQPHFH

Sequences:

>Translated_432_residues
MPKHKAAYGAKNGLECEALRPFLYVFNMRQRIAKRLPPDADKLVGLSLALFASGSRIEDRFWEAKLDALLAKIVRNGNQT
TLDAALDHLQQNHPDAYGALADMAETHSESMVIEHDGQPYDALLVAVPVLAWTRYMIPSGSLKGDVADALRTQLQAHVLA
SGTLVGLAPFLYSIDQLPRHHVETYRLVQQLAHAAIGQHAAKLSFGDLPETSPILADPRFLLAVVAAPAGAPLFRWQEEE
HGNRIERGQCLEQWTAQGGPSLSVALPGCEFECLLPDAYYSACRDADERIRPHTVRTAIRYLFDTLGAAPQELRAVVAGF
GERRIDEYRVGFTRRASNDVIYGVVWPLYGRENGDVSTDNATLEGEAPMEGPMEEIVSLLKECGVTDVRRHAGRFEPEYC
DDCGVPLYADPLGEIVHAEMPEDASPAQPHFH
>Mature_431_residues
PKHKAAYGAKNGLECEALRPFLYVFNMRQRIAKRLPPDADKLVGLSLALFASGSRIEDRFWEAKLDALLAKIVRNGNQTT
LDAALDHLQQNHPDAYGALADMAETHSESMVIEHDGQPYDALLVAVPVLAWTRYMIPSGSLKGDVADALRTQLQAHVLAS
GTLVGLAPFLYSIDQLPRHHVETYRLVQQLAHAAIGQHAAKLSFGDLPETSPILADPRFLLAVVAAPAGAPLFRWQEEEH
GNRIERGQCLEQWTAQGGPSLSVALPGCEFECLLPDAYYSACRDADERIRPHTVRTAIRYLFDTLGAAPQELRAVVAGFG
ERRIDEYRVGFTRRASNDVIYGVVWPLYGRENGDVSTDNATLEGEAPMEGPMEEIVSLLKECGVTDVRRHAGRFEPEYCD
DCGVPLYADPLGEIVHAEMPEDASPAQPHFH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47623; Mature: 47492

Theoretical pI: Translated: 5.10; Mature: 5.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKHKAAYGAKNGLECEALRPFLYVFNMRQRIAKRLPPDADKLVGLSLALFASGSRIEDR
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHH
FWEAKLDALLAKIVRNGNQTTLDAALDHLQQNHPDAYGALADMAETHSESMVIEHDGQPY
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEECCCCCH
DALLVAVPVLAWTRYMIPSGSLKGDVADALRTQLQAHVLASGTLVGLAPFLYSIDQLPRH
HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
HVETYRLVQQLAHAAIGQHAAKLSFGDLPETSPILADPRFLLAVVAAPAGAPLFRWQEEE
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHH
HGNRIERGQCLEQWTAQGGPSLSVALPGCEFECLLPDAYYSACRDADERIRPHTVRTAIR
HCCCCHHHHHHHHHHHCCCCEEEEEECCCCEEEECCHHHHHHHCCHHHHCCHHHHHHHHH
YLFDTLGAAPQELRAVVAGFGERRIDEYRVGFTRRASNDVIYGVVWPLYGRENGDVSTDN
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEECCCCCCCCCCCC
ATLEGEAPMEGPMEEIVSLLKECGVTDVRRHAGRFEPEYCDDCGVPLYADPLGEIVHAEM
CEECCCCCCCCCHHHHHHHHHHCCCHHHHHHCCCCCCCHHCCCCCCCCCCHHHHHHHCCC
PEDASPAQPHFH
CCCCCCCCCCCC
>Mature Secondary Structure 
PKHKAAYGAKNGLECEALRPFLYVFNMRQRIAKRLPPDADKLVGLSLALFASGSRIEDR
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHH
FWEAKLDALLAKIVRNGNQTTLDAALDHLQQNHPDAYGALADMAETHSESMVIEHDGQPY
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEECCCCCH
DALLVAVPVLAWTRYMIPSGSLKGDVADALRTQLQAHVLASGTLVGLAPFLYSIDQLPRH
HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
HVETYRLVQQLAHAAIGQHAAKLSFGDLPETSPILADPRFLLAVVAAPAGAPLFRWQEEE
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHH
HGNRIERGQCLEQWTAQGGPSLSVALPGCEFECLLPDAYYSACRDADERIRPHTVRTAIR
HCCCCHHHHHHHHHHHCCCCEEEEEECCCCEEEECCHHHHHHHCCHHHHCCHHHHHHHHH
YLFDTLGAAPQELRAVVAGFGERRIDEYRVGFTRRASNDVIYGVVWPLYGRENGDVSTDN
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEECCCCCCCCCCCC
ATLEGEAPMEGPMEEIVSLLKECGVTDVRRHAGRFEPEYCDDCGVPLYADPLGEIVHAEM
CEECCCCCCCCCHHHHHHHHHHCCCHHHHHHCCCCCCCHHCCCCCCCCCCHHHHHHHCCC
PEDASPAQPHFH
CCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA