Definition Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence.
Accession NC_008390
Length 3,556,545

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The map label for this gene is yhhW [C]

Identifier: 115352292

GI number: 115352292

Start: 2474208

End: 2475080

Strand: Direct

Name: yhhW [C]

Synonym: Bamb_2241

Alternate gene names: 115352292

Gene position: 2474208-2475080 (Clockwise)

Preceding gene: 115352290

Following gene: 115352293

Centisome position: 69.57

GC content: 68.96

Gene sequence:

>873_bases
ATGACGACCGCTCGCTCGCTTGACCGCACCTACCCCGCGCTTCGCACCACCGAAGGCGGCGGCTTCGTGGTTCACCGCCC
GTTCCCGACCCGACTGCTGATGGATTTCGATCCGTTCCTGTTGCTCGATGAAATGGGCCCCGTCGACTATGCGCCCGGCG
AAGCCAAGGGCGCGCCGGACCATCCGCATCGCGGCTTCGAGACGGTGACCTACGTGCTCGACGGCCGCTTTCGCCATCGC
GACTCGGCCGGCCATGCCGGCACGCTCGGGCCCGGCGACGTGCAGTGGATGACGGCCGGCGCGGGGGTCGTGCACAGCGA
AATGCCGGACCCCGAATTCGCGCAGGCGGGCGGCCGCTCGCACGGCTTCCAGCTGTGGGTGAACCTGCCGCGCCGCGACA
AGCTGATCGCACCGCGCTACCAGGAAATCCCGGCCGACCGCATCCCCAGCGCCACGTCGCCGGACGGTCGTGCGCGGGTC
CGCGTGATTGCCGGCGAAGCGTTCGGTGTGCGTGCCGCGATCGAGACGCGCACGCCGATCCTGTACCAGCATTTCACGCT
GCAACCGGGTGCAACGGTCACGCAGCCGGTGCCGCCAGGTTATCGCGTGTTCGCGTACCCGCTCGACGGAGCGGGCCGCT
ACGGGCCCGACAGGCAGCTCGTCGACGCACGGCAGATGGTCGTCTACGGTGACGATGGCGACGCGGTGACGTTCGAAGCC
GGCGATACGCCGCTCGACCTGCTGCTGATCGGCGGCGTGCCGCTCAACGAGCCGATCGTCCGCTATGGCCCGTTCGTGAT
GAATACCGAGGAAGAGATCCGGCAGGCCGTCGTCGACTACCAGACGGGCCGCATGGGCCGCATCGAAGCGTGA

Upstream 100 bases:

>100_bases
AATCCATTGCGAACCGCCGCAAATCGGACCGCAAAACGCCCAATATAATAGCGCTATGTTTCAAAAATAACGCTATTCCG
ATGATTTCGAGGGCTTCTGC

Downstream 100 bases:

>100_bases
CGTGCAATCGGGGCCGCAGCTGCCGCGAAACCGCTTGTTTTGCGTCACAATAACTTCTTGATCCATGTGGCTGCCCGCCA
CCAGAAGGAATCCGTCCCCT

Product: pirin domain-containing protein

Products: NA

Alternate protein names: Putative quercetinase; Pirin-like protein PA2418 [H]

Number of amino acids: Translated: 290; Mature: 289

Protein sequence:

>290_residues
MTTARSLDRTYPALRTTEGGGFVVHRPFPTRLLMDFDPFLLLDEMGPVDYAPGEAKGAPDHPHRGFETVTYVLDGRFRHR
DSAGHAGTLGPGDVQWMTAGAGVVHSEMPDPEFAQAGGRSHGFQLWVNLPRRDKLIAPRYQEIPADRIPSATSPDGRARV
RVIAGEAFGVRAAIETRTPILYQHFTLQPGATVTQPVPPGYRVFAYPLDGAGRYGPDRQLVDARQMVVYGDDGDAVTFEA
GDTPLDLLLIGGVPLNEPIVRYGPFVMNTEEEIRQAVVDYQTGRMGRIEA

Sequences:

>Translated_290_residues
MTTARSLDRTYPALRTTEGGGFVVHRPFPTRLLMDFDPFLLLDEMGPVDYAPGEAKGAPDHPHRGFETVTYVLDGRFRHR
DSAGHAGTLGPGDVQWMTAGAGVVHSEMPDPEFAQAGGRSHGFQLWVNLPRRDKLIAPRYQEIPADRIPSATSPDGRARV
RVIAGEAFGVRAAIETRTPILYQHFTLQPGATVTQPVPPGYRVFAYPLDGAGRYGPDRQLVDARQMVVYGDDGDAVTFEA
GDTPLDLLLIGGVPLNEPIVRYGPFVMNTEEEIRQAVVDYQTGRMGRIEA
>Mature_289_residues
TTARSLDRTYPALRTTEGGGFVVHRPFPTRLLMDFDPFLLLDEMGPVDYAPGEAKGAPDHPHRGFETVTYVLDGRFRHRD
SAGHAGTLGPGDVQWMTAGAGVVHSEMPDPEFAQAGGRSHGFQLWVNLPRRDKLIAPRYQEIPADRIPSATSPDGRARVR
VIAGEAFGVRAAIETRTPILYQHFTLQPGATVTQPVPPGYRVFAYPLDGAGRYGPDRQLVDARQMVVYGDDGDAVTFEAG
DTPLDLLLIGGVPLNEPIVRYGPFVMNTEEEIRQAVVDYQTGRMGRIEA

Specific function: Putative quercetin 2,3-dioxygenase [H]

COG id: COG1741

COG function: function code R; Pirin-related protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pirin family [H]

Homologues:

Organism=Homo sapiens, GI66363697, Length=290, Percent_Identity=43.1034482758621, Blast_Score=230, Evalue=1e-60,
Organism=Homo sapiens, GI4505823, Length=290, Percent_Identity=43.1034482758621, Blast_Score=230, Evalue=1e-60,
Organism=Escherichia coli, GI1789847, Length=105, Percent_Identity=36.1904761904762, Blast_Score=62, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011051
- InterPro:   IPR012093
- InterPro:   IPR008778
- InterPro:   IPR003829
- InterPro:   IPR014710 [H]

Pfam domain/function: PF02678 Pirin; PF05726 Pirin_C [H]

EC number: =1.13.11.24 [H]

Molecular weight: Translated: 31795; Mature: 31664

Theoretical pI: Translated: 5.60; Mature: 5.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTARSLDRTYPALRTTEGGGFVVHRPFPTRLLMDFDPFLLLDEMGPVDYAPGEAKGAPD
CCCHHHHHHCCCCEEEECCCCEEEECCCCCEEEECCCCEEEEECCCCCCCCCCCCCCCCC
HPHRGFETVTYVLDGRFRHRDSAGHAGTLGPGDVQWMTAGAGVVHSEMPDPEFAQAGGRS
CCCCCCEEEEEEECCCEECCCCCCCCCCCCCCCEEEEECCCCEEECCCCCHHHHHCCCCC
HGFQLWVNLPRRDKLIAPRYQEIPADRIPSATSPDGRARVRVIAGEAFGVRAAIETRTPI
CCEEEEEECCCCCCCCCCHHHHCCHHHCCCCCCCCCCEEEEEEECCCCCEEEEECCCCCE
LYQHFTLQPGATVTQPVPPGYRVFAYPLDGAGRYGPDRQLVDARQMVVYGDDGDAVTFEA
EEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHCCCEEEEEECCCCCEEEEEC
GDTPLDLLLIGGVPLNEPIVRYGPFVMNTEEEIRQAVVDYQTGRMGRIEA
CCCCEEEEEECCCCCCCCHHHHCCEEECCHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
TTARSLDRTYPALRTTEGGGFVVHRPFPTRLLMDFDPFLLLDEMGPVDYAPGEAKGAPD
CCHHHHHHCCCCEEEECCCCEEEECCCCCEEEECCCCEEEEECCCCCCCCCCCCCCCCC
HPHRGFETVTYVLDGRFRHRDSAGHAGTLGPGDVQWMTAGAGVVHSEMPDPEFAQAGGRS
CCCCCCEEEEEEECCCEECCCCCCCCCCCCCCCEEEEECCCCEEECCCCCHHHHHCCCCC
HGFQLWVNLPRRDKLIAPRYQEIPADRIPSATSPDGRARVRVIAGEAFGVRAAIETRTPI
CCEEEEEECCCCCCCCCCHHHHCCHHHCCCCCCCCCCEEEEEEECCCCCEEEEECCCCCE
LYQHFTLQPGATVTQPVPPGYRVFAYPLDGAGRYGPDRQLVDARQMVVYGDDGDAVTFEA
EEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHCCCEEEEEECCCCCEEEEEC
GDTPLDLLLIGGVPLNEPIVRYGPFVMNTEEEIRQAVVDYQTGRMGRIEA
CCCCEEEEEECCCCCCCCHHHHCCEEECCHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]