| Definition | Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008390 |
| Length | 3,556,545 |
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The map label for this gene is 115352287
Identifier: 115352287
GI number: 115352287
Start: 2470349
End: 2470585
Strand: Direct
Name: 115352287
Synonym: Bamb_2236
Alternate gene names: NA
Gene position: 2470349-2470585 (Clockwise)
Preceding gene: 115352286
Following gene: 115352288
Centisome position: 69.46
GC content: 65.4
Gene sequence:
>237_bases ATGATCGTCTGCGTGTGCAAGTCAGTTTCGGATCGCAAGATTCGCGCGTCCCTCGCCGAGGGCGTGGGTTCCTTCGACGA ACTCCAGTTCGAGCTCGGCGTGGCCACGTGCTGCGGCAAGTGCGAGGAGTCCGTACGCGACCTCATGGCCGAGCAAGGCG TCTGCGCGAGCCGGTGCGGCGTCGAGCACCACGCTCATCCGATCCCGGTCACGTTCTACGACCGCAAGGCCGCCTGA
Upstream 100 bases:
>100_bases GAAGGGTCCGATGACCTTAAAAAAAGCCGAACCCAGGCTTGTCAACCTCCGCAAATTTAATGATAATAATTCGCATTACC GTTAGCTATCGCAACTCATC
Downstream 100 bases:
>100_bases GCGGCGCCGAGCGTGCGCATGCGGCCGCCGCCGCATTTTATGTCCGACCGTCAGCAAGCCATTTTCCGCGCGAGCCAGCG GCTTACCTGCCAAGGAGCCT
Product: BFD/(2Fe-2S)-binding domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 78; Mature: 78
Protein sequence:
>78_residues MIVCVCKSVSDRKIRASLAEGVGSFDELQFELGVATCCGKCEESVRDLMAEQGVCASRCGVEHHAHPIPVTFYDRKAA
Sequences:
>Translated_78_residues MIVCVCKSVSDRKIRASLAEGVGSFDELQFELGVATCCGKCEESVRDLMAEQGVCASRCGVEHHAHPIPVTFYDRKAA >Mature_78_residues MIVCVCKSVSDRKIRASLAEGVGSFDELQFELGVATCCGKCEESVRDLMAEQGVCASRCGVEHHAHPIPVTFYDRKAA
Specific function: Unknown
COG id: COG2906
COG function: function code P; Bacterioferritin-associated ferredoxin
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8447; Mature: 8447
Theoretical pI: Translated: 6.22; Mature: 6.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
9.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 11.5 %Cys+Met (Translated Protein) 9.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 11.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIVCVCKSVSDRKIRASLAEGVGSFDELQFELGVATCCGKCEESVRDLMAEQGVCASRCG CEEEEECCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCC VEHHAHPIPVTFYDRKAA CCCCCCCCCEEECCCCCC >Mature Secondary Structure MIVCVCKSVSDRKIRASLAEGVGSFDELQFELGVATCCGKCEESVRDLMAEQGVCASRCG CEEEEECCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCC VEHHAHPIPVTFYDRKAA CCCCCCCCCEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA