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The map label for this gene is ttuB [H]

Identifier: 115352271

GI number: 115352271

Start: 2447031

End: 2448392

Strand: Direct

Name: ttuB [H]

Synonym: Bamb_2220

Alternate gene names: 115352271

Gene position: 2447031-2448392 (Clockwise)

Preceding gene: 115352267

Following gene: 115352272

Centisome position: 68.8

GC content: 67.33

Gene sequence:

>1362_bases
TTGACCTCACCCGCCCTGCCCGGCCGCGACCCGCTCGCGTCCGCCGTTTCGAAAGTGAAGTGGCACGTGCTGCCGCTCGT
GCTGATCATGTTCATCGCGAACTACATCGACCGCGTGAACGTCGGCTTCGTCGACCGCCACCTCGAAGCGTCGATCGGAA
TCGGCGCGGCCGCTTACGGGCTCGGCGCCGGCCTGTTCTTCGTCGGCTACGCGCTGTTCGAAGTGCCGTCGAACCTGCTG
ATGCAGCGCTACGGCGCACGCATCTGGCTTGCGCGGATCATGGCGACGTGGGGCGTCGTCGCGGCCGCGATGGCGTTCGT
GTGGAACGACACGTCGTTCTATGCGCTGCGCTTCCTGCTCGGCGCGGCCGAGGCCGGCTTCTTCCCCGGCGTCGTGCTGT
ACCTGTCGCAATGGCTGCCGCCGCAGGAACGCGGCAAGGCGATGGCGATCTTCCTCGGCGGTTCCGCGTTCGCTTCGATC
CTGTCCGGGCCCGTCACCGGCGCGCTGCTGTCGATCCACGGCTTCGGCCTGCAGGGCTGGCAGTGGATGTTCCTGATCGA
AGGGATGTTCTCGGTCGCGCTGTGCGGCGCGAGCTGGCTGCTGCTGAAATCGCACATCCGCGACGCGACGTGGCTCACCG
CCGACGAACGCGCGGCACTCCAGAACGCCCTCGATGAAGAGCGCGCGACCCGCGACGTGCGCTCGAAGGTGCACGTGTCG
GCCACCACGCTGCTGCGCGACCCGCAGATCATGCTGTTCTGCTTCCTGTATTTCGCGATCCAGCTGACGATCTACGCGGC
CACCTTCTGGCTGCCGACGATCATCCGCAAGATGGGCGGCCTCACCGACTTCCAGGTCGGCCTCTACAACACGATTCCGT
GGATGATCGCGATCGGCGCGATGTACGGCTTCGCGGTGCTCTCCGCGAAGTGGAAGCATCCGCAGCGCTGGCTGTCGTTC
GCGCTGGTGCTGGCCGCGTGCGGGCTGTTCGCGTCGACGTCGCACGATCCCGTCTGGTCGTTCGCGTCGATCTGCTTCGC
CGCGCTCGGCTTCAAGGCCGCGTCGTCGTTGTTCTGGCCGATCCCGCAGGGCTACCTCGACACGCGCGTGGCCGCGGCCG
TGATCGCACTGATCAACTCGATCGGCAACCTTGGCGGCTTCGTCGCGCCGACGGCATTCGGCTATCTGAAGCAACATACG
GGTTCGATCACGGGCGGCCTGTATGCGCTCGCGATCGCGTCCCTCGTCGCGGCGGTCGCCGCGCTGTTCGCGCGCACGCA
CCGGCGCAGCGATCCGCCGCGCGGCCTGCCGGCCGACGAGTCCTTCACGAACACCGCGATGCTCCGCCATGCCGAACACT
GA

Upstream 100 bases:

>100_bases
AGCTCAGGCGTACCATGTCATACGACGACATACTACTTAAATCACCATCCCGACGCCGACACGGGCCGCCGCCCGTTTCG
CCGCCCGACCGGAGACACCC

Downstream 100 bases:

>100_bases
TCGCCTGACCGTCGTCGTCTCGAATGCCGTCGACGGCGACCTCGCCACGTTCTCGCTCACGTCCGACGGCGCGCTCGCGC
CGCTCGCCCGCTACCCGGCC

Product: major facilitator transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 453; Mature: 452

Protein sequence:

>453_residues
MTSPALPGRDPLASAVSKVKWHVLPLVLIMFIANYIDRVNVGFVDRHLEASIGIGAAAYGLGAGLFFVGYALFEVPSNLL
MQRYGARIWLARIMATWGVVAAAMAFVWNDTSFYALRFLLGAAEAGFFPGVVLYLSQWLPPQERGKAMAIFLGGSAFASI
LSGPVTGALLSIHGFGLQGWQWMFLIEGMFSVALCGASWLLLKSHIRDATWLTADERAALQNALDEERATRDVRSKVHVS
ATTLLRDPQIMLFCFLYFAIQLTIYAATFWLPTIIRKMGGLTDFQVGLYNTIPWMIAIGAMYGFAVLSAKWKHPQRWLSF
ALVLAACGLFASTSHDPVWSFASICFAALGFKAASSLFWPIPQGYLDTRVAAAVIALINSIGNLGGFVAPTAFGYLKQHT
GSITGGLYALAIASLVAAVAALFARTHRRSDPPRGLPADESFTNTAMLRHAEH

Sequences:

>Translated_453_residues
MTSPALPGRDPLASAVSKVKWHVLPLVLIMFIANYIDRVNVGFVDRHLEASIGIGAAAYGLGAGLFFVGYALFEVPSNLL
MQRYGARIWLARIMATWGVVAAAMAFVWNDTSFYALRFLLGAAEAGFFPGVVLYLSQWLPPQERGKAMAIFLGGSAFASI
LSGPVTGALLSIHGFGLQGWQWMFLIEGMFSVALCGASWLLLKSHIRDATWLTADERAALQNALDEERATRDVRSKVHVS
ATTLLRDPQIMLFCFLYFAIQLTIYAATFWLPTIIRKMGGLTDFQVGLYNTIPWMIAIGAMYGFAVLSAKWKHPQRWLSF
ALVLAACGLFASTSHDPVWSFASICFAALGFKAASSLFWPIPQGYLDTRVAAAVIALINSIGNLGGFVAPTAFGYLKQHT
GSITGGLYALAIASLVAAVAALFARTHRRSDPPRGLPADESFTNTAMLRHAEH
>Mature_452_residues
TSPALPGRDPLASAVSKVKWHVLPLVLIMFIANYIDRVNVGFVDRHLEASIGIGAAAYGLGAGLFFVGYALFEVPSNLLM
QRYGARIWLARIMATWGVVAAAMAFVWNDTSFYALRFLLGAAEAGFFPGVVLYLSQWLPPQERGKAMAIFLGGSAFASIL
SGPVTGALLSIHGFGLQGWQWMFLIEGMFSVALCGASWLLLKSHIRDATWLTADERAALQNALDEERATRDVRSKVHVSA
TTLLRDPQIMLFCFLYFAIQLTIYAATFWLPTIIRKMGGLTDFQVGLYNTIPWMIAIGAMYGFAVLSAKWKHPQRWLSFA
LVLAACGLFASTSHDPVWSFASICFAALGFKAASSLFWPIPQGYLDTRVAAAVIALINSIGNLGGFVAPTAFGYLKQHTG
SITGGLYALAIASLVAAVAALFARTHRRSDPPRGLPADESFTNTAMLRHAEH

Specific function: Component of the tartrate utilization system and may allow entry of tartrate and tartrate dehydrogenase [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily. Phthalate permease family [H]

Homologues:

Organism=Escherichia coli, GI87082071, Length=419, Percent_Identity=33.4128878281623, Blast_Score=233, Evalue=2e-62,
Organism=Escherichia coli, GI1789515, Length=431, Percent_Identity=23.8979118329466, Blast_Score=97, Evalue=3e-21,
Organism=Escherichia coli, GI1789152, Length=440, Percent_Identity=24.3181818181818, Blast_Score=92, Evalue=5e-20,
Organism=Escherichia coli, GI87082320, Length=439, Percent_Identity=22.5512528473804, Blast_Score=90, Evalue=3e-19,
Organism=Escherichia coli, GI2367379, Length=441, Percent_Identity=23.8095238095238, Blast_Score=89, Evalue=5e-19,
Organism=Escherichia coli, GI2367193, Length=313, Percent_Identity=22.6837060702875, Blast_Score=72, Evalue=7e-14,
Organism=Saccharomyces cerevisiae, GI6322025, Length=249, Percent_Identity=24.4979919678715, Blast_Score=84, Evalue=6e-17,
Organism=Saccharomyces cerevisiae, GI6321698, Length=293, Percent_Identity=22.8668941979522, Blast_Score=80, Evalue=9e-16,
Organism=Saccharomyces cerevisiae, GI6319876, Length=175, Percent_Identity=28.5714285714286, Blast_Score=73, Evalue=1e-13,
Organism=Drosophila melanogaster, GI24639764, Length=354, Percent_Identity=24.5762711864407, Blast_Score=79, Evalue=9e-15,
Organism=Drosophila melanogaster, GI24641682, Length=383, Percent_Identity=24.8041775456919, Blast_Score=77, Evalue=3e-14,
Organism=Drosophila melanogaster, GI20130167, Length=381, Percent_Identity=22.0472440944882, Blast_Score=75, Evalue=9e-14,
Organism=Drosophila melanogaster, GI24654215, Length=372, Percent_Identity=22.5806451612903, Blast_Score=70, Evalue=3e-12,
Organism=Drosophila melanogaster, GI19922400, Length=372, Percent_Identity=22.5806451612903, Blast_Score=70, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004744
- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 49225; Mature: 49094

Theoretical pI: Translated: 9.55; Mature: 9.55

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSPALPGRDPLASAVSKVKWHVLPLVLIMFIANYIDRVNVGFVDRHLEASIGIGAAAYG
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHH
LGAGLFFVGYALFEVPSNLLMQRYGARIWLARIMATWGVVAAAMAFVWNDTSFYALRFLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
GAAEAGFFPGVVLYLSQWLPPQERGKAMAIFLGGSAFASILSGPVTGALLSIHGFGLQGW
HHHHCCCHHHHHHHHHHCCCHHHCCCEEEEEECHHHHHHHHCCCHHHHHHHHCCCCCCCH
QWMFLIEGMFSVALCGASWLLLKSHIRDATWLTADERAALQNALDEERATRDVRSKVHVS
HHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
ATTLLRDPQIMLFCFLYFAIQLTIYAATFWLPTIIRKMGGLTDFQVGLYNTIPWMIAIGA
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHH
MYGFAVLSAKWKHPQRWLSFALVLAACGLFASTSHDPVWSFASICFAALGFKAASSLFWP
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
IPQGYLDTRVAAAVIALINSIGNLGGFVAPTAFGYLKQHTGSITGGLYALAIASLVAAVA
CCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
ALFARTHRRSDPPRGLPADESFTNTAMLRHAEH
HHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCC
>Mature Secondary Structure 
TSPALPGRDPLASAVSKVKWHVLPLVLIMFIANYIDRVNVGFVDRHLEASIGIGAAAYG
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHH
LGAGLFFVGYALFEVPSNLLMQRYGARIWLARIMATWGVVAAAMAFVWNDTSFYALRFLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
GAAEAGFFPGVVLYLSQWLPPQERGKAMAIFLGGSAFASILSGPVTGALLSIHGFGLQGW
HHHHCCCHHHHHHHHHHCCCHHHCCCEEEEEECHHHHHHHHCCCHHHHHHHHCCCCCCCH
QWMFLIEGMFSVALCGASWLLLKSHIRDATWLTADERAALQNALDEERATRDVRSKVHVS
HHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
ATTLLRDPQIMLFCFLYFAIQLTIYAATFWLPTIIRKMGGLTDFQVGLYNTIPWMIAIGA
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHH
MYGFAVLSAKWKHPQRWLSFALVLAACGLFASTSHDPVWSFASICFAALGFKAASSLFWP
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
IPQGYLDTRVAAAVIALINSIGNLGGFVAPTAFGYLKQHTGSITGGLYALAIASLVAAVA
CCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
ALFARTHRRSDPPRGLPADESFTNTAMLRHAEH
HHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7592429 [H]