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The map label for this gene is ybfB [H]

Identifier: 115352267

GI number: 115352267

Start: 2442043

End: 2443275

Strand: Direct

Name: ybfB [H]

Synonym: Bamb_2216

Alternate gene names: 115352267

Gene position: 2442043-2443275 (Clockwise)

Preceding gene: 115352266

Following gene: 115352271

Centisome position: 68.66

GC content: 71.21

Gene sequence:

>1233_bases
ATGACCCCGATCGAACGAGACGCCCGGCGCCGCTGGCTGCCGGTACTCGCAGGCGGCCTGATCATGGGCGCCGCGCTCGG
TATCCGCCACGTGCAGGGCTTGTTCCTCGCGCCGGTCACGCTCGACCACGGCTGGTCGCGCGAAGCGTTCGGTCTCGCGC
TCGCGCTGCAGAACCTGGTCTGGGGCATCGCGCAGCCGTTGACCGGGATGATCGCCGACCGCTTCGGGTCGGTGCGCGTG
ATCGTCGCCGGCATGCTGCTGTACGCGGCCGGGCTCGTCACGATGGCGCTGGCGGCGTCGATCGGCGTGTTCACGGCCGG
TGCGGGGCTCGTGATCGGCATCGCGCTGTCGGGGTCAGCGTTCGCGTCGATCTACGGCGCGCTGAGCCGGCTGTTTCCGC
CCGACCGGCGCGGCTGGGCGCTCGGCGTCGCCGGCGCGATCGGCGGGCTCGGCCAGTTCTGCATGGTGCCGGTCGCGCAG
GTGCTGATCGGCGGCATCGGCTGGCAGCATGCATTCGTCGCGCTCGCGCTCGTCGCCGCGCTGCTCGCGCCGCTCGCGGT
ACTGGTGCGCGACCGGCCCGCGCAGGCCGCGAGCCAAGCCGACGGCACCGATCAGTCGATCGCGGCGGCCGTGCGCGAAG
CGTTCACGCACCGCGGCTTCTGGCTGCTGAACGCCGGGTTCTTCGCATGCGGGTTCCAGCTGGCGTTCATCGCGACCCAC
CTGCCGGCCTACCTGCTCGATCACGGGCTGCCCGCGCGCCATGCCAGCGTCGCGCTCGCGCTGATCGCGCTGACCAACGT
GGCCGGCACCTACGCGTGCGGCCATCTCGGCGGCGTGCTGCGGCGCAAGTACGTGCTGTCCGTGCTGTACCTCGTGCGCG
CGCTCGCGATGGCCGCGTTCGTTGCCGCGCCGTTGTCGCCCGTGAGCGTCTACGTGTTCGCGGCCGTGATGGGCTTCACG
TGGCTCGGCACGGTGCCGCTGACCAACGGCGTGATCTCGCAGGTATTCGGCGTGCGCTACATCGCGACACTGTTCGGCTT
CGTCTTCTTCGGGCACCAGCTCGGCAGCTTCTTCGGCGTATGGCTCGGCGCGCTCGTGTACGACGCGACGCATTCGTATC
TGCCGCTGTGGATCGGCTCGATCGCGCTCGGCGTGCTGGCCGCGCTGCTGCACCTGCCGATCGACGACGCGCGCATCGTG
CGCCCCGGGTCGGCCAAAGCCGCATGGGCATGA

Upstream 100 bases:

>100_bases
GCGAACCCGACCGAATGATCGCTTGAGCGACACCGCGACCGGATCGTCTAATCGGATCGAACGCGGCCGTCGCGCCGCAC
GCATTCATCCGGAGACATGC

Downstream 100 bases:

>100_bases
TCCGTGCGGCGCTGGCCGCCGCCGTGCTCGCGTTCGTCGCGTGGTGTGGCGCGACCTACTTCGATTCGGGCCTCGCGCTC
GCGCTGCTCGAGCATGCGGC

Product: major facilitator transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 410; Mature: 409

Protein sequence:

>410_residues
MTPIERDARRRWLPVLAGGLIMGAALGIRHVQGLFLAPVTLDHGWSREAFGLALALQNLVWGIAQPLTGMIADRFGSVRV
IVAGMLLYAAGLVTMALAASIGVFTAGAGLVIGIALSGSAFASIYGALSRLFPPDRRGWALGVAGAIGGLGQFCMVPVAQ
VLIGGIGWQHAFVALALVAALLAPLAVLVRDRPAQAASQADGTDQSIAAAVREAFTHRGFWLLNAGFFACGFQLAFIATH
LPAYLLDHGLPARHASVALALIALTNVAGTYACGHLGGVLRRKYVLSVLYLVRALAMAAFVAAPLSPVSVYVFAAVMGFT
WLGTVPLTNGVISQVFGVRYIATLFGFVFFGHQLGSFFGVWLGALVYDATHSYLPLWIGSIALGVLAALLHLPIDDARIV
RPGSAKAAWA

Sequences:

>Translated_410_residues
MTPIERDARRRWLPVLAGGLIMGAALGIRHVQGLFLAPVTLDHGWSREAFGLALALQNLVWGIAQPLTGMIADRFGSVRV
IVAGMLLYAAGLVTMALAASIGVFTAGAGLVIGIALSGSAFASIYGALSRLFPPDRRGWALGVAGAIGGLGQFCMVPVAQ
VLIGGIGWQHAFVALALVAALLAPLAVLVRDRPAQAASQADGTDQSIAAAVREAFTHRGFWLLNAGFFACGFQLAFIATH
LPAYLLDHGLPARHASVALALIALTNVAGTYACGHLGGVLRRKYVLSVLYLVRALAMAAFVAAPLSPVSVYVFAAVMGFT
WLGTVPLTNGVISQVFGVRYIATLFGFVFFGHQLGSFFGVWLGALVYDATHSYLPLWIGSIALGVLAALLHLPIDDARIV
RPGSAKAAWA
>Mature_409_residues
TPIERDARRRWLPVLAGGLIMGAALGIRHVQGLFLAPVTLDHGWSREAFGLALALQNLVWGIAQPLTGMIADRFGSVRVI
VAGMLLYAAGLVTMALAASIGVFTAGAGLVIGIALSGSAFASIYGALSRLFPPDRRGWALGVAGAIGGLGQFCMVPVAQV
LIGGIGWQHAFVALALVAALLAPLAVLVRDRPAQAASQADGTDQSIAAAVREAFTHRGFWLLNAGFFACGFQLAFIATHL
PAYLLDHGLPARHASVALALIALTNVAGTYACGHLGGVLRRKYVLSVLYLVRALAMAAFVAAPLSPVSVYVFAAVMGFTW
LGTVPLTNGVISQVFGVRYIATLFGFVFFGHQLGSFFGVWLGALVYDATHSYLPLWIGSIALGVLAALLHLPIDDARIVR
PGSAKAAWA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Escherichia coli, GI1789969, Length=374, Percent_Identity=27.2727272727273, Blast_Score=96, Evalue=6e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 42875; Mature: 42744

Theoretical pI: Translated: 10.20; Mature: 10.20

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPIERDARRRWLPVLAGGLIMGAALGIRHVQGLFLAPVTLDHGWSREAFGLALALQNLV
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECEEECCCCCHHHHHHHHHHHHHH
WGIAQPLTGMIADRFGSVRVIVAGMLLYAAGLVTMALAASIGVFTAGAGLVIGIALSGSA
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEEEECCHH
FASIYGALSRLFPPDRRGWALGVAGAIGGLGQFCMVPVAQVLIGGIGWQHAFVALALVAA
HHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
LLAPLAVLVRDRPAQAASQADGTDQSIAAAVREAFTHRGFWLLNAGFFACGFQLAFIATH
HHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHHHHHCCEEEECCHHHHHHHHHHHHHHH
LPAYLLDHGLPARHASVALALIALTNVAGTYACGHLGGVLRRKYVLSVLYLVRALAMAAF
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VAAPLSPVSVYVFAAVMGFTWLGTVPLTNGVISQVFGVRYIATLFGFVFFGHQLGSFFGV
HHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WLGALVYDATHSYLPLWIGSIALGVLAALLHLPIDDARIVRPGSAKAAWA
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCC
>Mature Secondary Structure 
TPIERDARRRWLPVLAGGLIMGAALGIRHVQGLFLAPVTLDHGWSREAFGLALALQNLV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECEEECCCCCHHHHHHHHHHHHHH
WGIAQPLTGMIADRFGSVRVIVAGMLLYAAGLVTMALAASIGVFTAGAGLVIGIALSGSA
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEEEECCHH
FASIYGALSRLFPPDRRGWALGVAGAIGGLGQFCMVPVAQVLIGGIGWQHAFVALALVAA
HHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
LLAPLAVLVRDRPAQAASQADGTDQSIAAAVREAFTHRGFWLLNAGFFACGFQLAFIATH
HHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHHHHHCCEEEECCHHHHHHHHHHHHHHH
LPAYLLDHGLPARHASVALALIALTNVAGTYACGHLGGVLRRKYVLSVLYLVRALAMAAF
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VAAPLSPVSVYVFAAVMGFTWLGTVPLTNGVISQVFGVRYIATLFGFVFFGHQLGSFFGV
HHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WLGALVYDATHSYLPLWIGSIALGVLAALLHLPIDDARIVRPGSAKAAWA
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]