Definition Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence.
Accession NC_008390
Length 3,556,545

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The map label for this gene is gltI [H]

Identifier: 115352263

GI number: 115352263

Start: 2437616

End: 2438608

Strand: Direct

Name: gltI [H]

Synonym: Bamb_2212

Alternate gene names: 115352263

Gene position: 2437616-2438608 (Clockwise)

Preceding gene: 115352249

Following gene: 115352266

Centisome position: 68.54

GC content: 65.66

Gene sequence:

>993_bases
ATGTTGCAATTATTTTTTATTTGGCAACATACGAATCCGCACTTTCCCGCCATCCGCCTTCGGAGACCTCCCATGACCAT
CCCGCCCCGGTTGACCGCCCTTTTCGGCCGCAGCCTGCTCGTCGCCGCCTGCGCACTCGCGTGCGGCGCGTCGCTCGCCG
CGGAGCCGCTGTCCGGCACGCTCGAGAAGATCCGGCAGGCCGGCCTGATCTCGATCGGCCACCGCGAAACGTCGGTGCCG
TTCTCCTACGTCGACGCGAGCGGCAAGGTGATCGGCTTCTCGCAGGACCTGTGCGATCGCGTGATCGCCGCCGTGAAGGC
GCGCACCGGCAAGCCCGACCTGCAGGTGCGCTTCATCCCGGTCACGTCGCAGAACCGCATCCCGCTCGTGCAGAACGGCA
CCGTCGATCTCGAATGCGGGGTGACCACCAATCTCGCCGCGCGCCACGCGCAGGTCGCGTTCTCGACCACCTTCTTCGTC
GCGACGACGCGCCTGCTCACGCGCACGAGCTCGGGCATCCGCGACTTCCCCGATCTCGCCGGCAAGACGGTCGTGACGAA
CCAGGGCACGACGTCCGAACGCCTGCTGCGCAAGATGAACGAGGAAAAGAAGATGAACATGCAGATCATCAGCGCGAAGG
ACTACGGCGAAGGACGCCTCACGCTCGAATCGGGCCGCGCGGCCGCCTACATGATGGACGACGTGCTGCTCGCCGGCGTG
CGCCAGCTCGCGGCGAAACCGGCCGACTGGGCAATCGTCGGCACGCCGCAGTCGTCGGAAGCGTACGGATTCATGCTGCG
CAAGGACGATCCGCAGTTCAAGGCGCTCGTCGACGGCGTGCTCGTGCAGCTGATGAAGAGCGGCGAGATCAATGCGCTGT
ACGACAAGTGGTTCATGAAGCCGGTGCCGCCGAAGGGGCTCGCGTTCGACTTCCCGATGAGCGACGTGATCAGGACGCGC
TACGCGGCGCCGAACGACGCACCGCTCGAGTGA

Upstream 100 bases:

>100_bases
CTTGTCTAGACAACCCCGTTTTTAATGATTTCGACTCGGGAGTTTCCCTGATGCCGGGTGCGCCCGGCGGGAGTAGCCGG
CCAGGCCCGGGAATTAACAT

Downstream 100 bases:

>100_bases
GCGCCGCGCGGTGACATCGGCTCACGCGCGCGTCCACGCGACGCACGCCGCGTAGCCGGGCGCCGCGTCGAGCCAGCGCG
CGTCGAACGCGGCCACGCCG

Product: extracellular solute-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 330; Mature: 330

Protein sequence:

>330_residues
MLQLFFIWQHTNPHFPAIRLRRPPMTIPPRLTALFGRSLLVAACALACGASLAAEPLSGTLEKIRQAGLISIGHRETSVP
FSYVDASGKVIGFSQDLCDRVIAAVKARTGKPDLQVRFIPVTSQNRIPLVQNGTVDLECGVTTNLAARHAQVAFSTTFFV
ATTRLLTRTSSGIRDFPDLAGKTVVTNQGTTSERLLRKMNEEKKMNMQIISAKDYGEGRLTLESGRAAAYMMDDVLLAGV
RQLAAKPADWAIVGTPQSSEAYGFMLRKDDPQFKALVDGVLVQLMKSGEINALYDKWFMKPVPPKGLAFDFPMSDVIRTR
YAAPNDAPLE

Sequences:

>Translated_330_residues
MLQLFFIWQHTNPHFPAIRLRRPPMTIPPRLTALFGRSLLVAACALACGASLAAEPLSGTLEKIRQAGLISIGHRETSVP
FSYVDASGKVIGFSQDLCDRVIAAVKARTGKPDLQVRFIPVTSQNRIPLVQNGTVDLECGVTTNLAARHAQVAFSTTFFV
ATTRLLTRTSSGIRDFPDLAGKTVVTNQGTTSERLLRKMNEEKKMNMQIISAKDYGEGRLTLESGRAAAYMMDDVLLAGV
RQLAAKPADWAIVGTPQSSEAYGFMLRKDDPQFKALVDGVLVQLMKSGEINALYDKWFMKPVPPKGLAFDFPMSDVIRTR
YAAPNDAPLE
>Mature_330_residues
MLQLFFIWQHTNPHFPAIRLRRPPMTIPPRLTALFGRSLLVAACALACGASLAAEPLSGTLEKIRQAGLISIGHRETSVP
FSYVDASGKVIGFSQDLCDRVIAAVKARTGKPDLQVRFIPVTSQNRIPLVQNGTVDLECGVTTNLAARHAQVAFSTTFFV
ATTRLLTRTSSGIRDFPDLAGKTVVTNQGTTSERLLRKMNEEKKMNMQIISAKDYGEGRLTLESGRAAAYMMDDVLLAGV
RQLAAKPADWAIVGTPQSSEAYGFMLRKDDPQFKALVDGVLVQLMKSGEINALYDKWFMKPVPPKGLAFDFPMSDVIRTR
YAAPNDAPLE

Specific function: Part of the binding-protein-dependent transport system for glutamate and aspartate. Binds to both aspartate and glutamate [H]

COG id: COG0834

COG function: function code ET; ABC-type amino acid transport/signal transduction systems, periplasmic component/domain

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 3 family [H]

Homologues:

Organism=Escherichia coli, GI1786876, Length=270, Percent_Identity=58.5185185185185, Blast_Score=338, Evalue=3e-94,
Organism=Escherichia coli, GI1788228, Length=273, Percent_Identity=24.5421245421245, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1788649, Length=270, Percent_Identity=27.4074074074074, Blast_Score=67, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015683
- InterPro:   IPR001638 [H]

Pfam domain/function: PF00497 SBP_bac_3 [H]

EC number: NA

Molecular weight: Translated: 36171; Mature: 36171

Theoretical pI: Translated: 9.90; Mature: 9.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLQLFFIWQHTNPHFPAIRLRRPPMTIPPRLTALFGRSLLVAACALACGASLAAEPLSGT
CEEEEEEEECCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHCCCHHHH
LEKIRQAGLISIGHRETSVPFSYVDASGKVIGFSQDLCDRVIAAVKARTGKPDLQVRFIP
HHHHHHCCCEEECCCCCCCCEEEECCCCCEEECCHHHHHHHHHHHHHCCCCCCEEEEEEE
VTSQNRIPLVQNGTVDLECGVTTNLAARHAQVAFSTTFFVATTRLLTRTSSGIRDFPDLA
ECCCCCCCEEECCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHC
GKTVVTNQGTTSERLLRKMNEEKKMNMQIISAKDYGEGRLTLESGRAAAYMMDDVLLAGV
CCEEEECCCCCHHHHHHHHCHHHCCCEEEEEECCCCCCEEEEECCCEEEHHHHHHHHHHH
RQLAAKPADWAIVGTPQSSEAYGFMLRKDDPQFKALVDGVLVQLMKSGEINALYDKWFMK
HHHHCCCCCEEEEECCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEHHHHCCC
PVPPKGLAFDFPMSDVIRTRYAAPNDAPLE
CCCCCCCEEECCHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MLQLFFIWQHTNPHFPAIRLRRPPMTIPPRLTALFGRSLLVAACALACGASLAAEPLSGT
CEEEEEEEECCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHCCCHHHH
LEKIRQAGLISIGHRETSVPFSYVDASGKVIGFSQDLCDRVIAAVKARTGKPDLQVRFIP
HHHHHHCCCEEECCCCCCCCEEEECCCCCEEECCHHHHHHHHHHHHHCCCCCCEEEEEEE
VTSQNRIPLVQNGTVDLECGVTTNLAARHAQVAFSTTFFVATTRLLTRTSSGIRDFPDLA
ECCCCCCCEEECCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHC
GKTVVTNQGTTSERLLRKMNEEKKMNMQIISAKDYGEGRLTLESGRAAAYMMDDVLLAGV
CCEEEECCCCCHHHHHHHHCHHHCCCEEEEEECCCCCCEEEEECCCEEEHHHHHHHHHHH
RQLAAKPADWAIVGTPQSSEAYGFMLRKDDPQFKALVDGVLVQLMKSGEINALYDKWFMK
HHHHCCCCCEEEEECCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEHHHHCCC
PVPPKGLAFDFPMSDVIRTRYAAPNDAPLE
CCCCCCCEEECCHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503; 10493123; 1091635; 1091636 [H]