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The map label for this gene is recJ [H]

Identifier: 115352204

GI number: 115352204

Start: 2364956

End: 2366653

Strand: Direct

Name: recJ [H]

Synonym: Bamb_2153

Alternate gene names: 115352204

Gene position: 2364956-2366653 (Clockwise)

Preceding gene: 115352203

Following gene: 115352205

Centisome position: 66.5

GC content: 71.38

Gene sequence:

>1698_bases
ATGACCCGGATCGTTACCCGCCCCGTCGCGCCCGCCGACGCAGAAGCGCTCGCGCGCCACGGCCTGCACCCTGTCCTCGC
GCGGCTGTATGCGTCGCGCGGCGTGCAGTCCCCGACCGACATCGAGACCGCGCTCGCGCGCCTCGTGCCGCCCACCGAAC
TGAAAGGCTGCGCGGACGCCGCGGCGCTGCTCGCCGACGCGATCGCCGACAAGCGGCGCCTGCTGGTCGTCGCCGACTAC
GATTGCGACGGCGCGACCGCCTGTGCGGTCGCGGTGCGCGGCCTGCGAATGTTCGGCGCGCAGATCGACTACCTGGTGCC
GAACCGCTTCGAATACGGCTACGGGCTCACGCCCGAGATCGTCGAACTCGCGGCCGCACGCAAGCCCGACCTGCTGATCA
CCGTCGACAACGGGATCGCGAGCGTCGCAGGCGTCGAAGCGGCAAATGCACGCGGCATCGACGTGCTCGTGACCGACCAC
CACCTGCCCGGCGACGCGCTGCCCGCCGCGCGCGCGATCGTCAACCCGAACCAGCCCGGCTGCGCGTTCCCGAGCAAGCA
CATCGCCGGTGTCGGCGTGATGTTCTACGTGCTGCTCGCGCTGCGCGCCGAGCTGCGCCGCCGCGGCGCGTTCGCGAGCA
AGGAAGCCGAGCCGCGCCTCGACGGCCTGCTCGACCTCGTCGCGCTCGGCACCGTCGCCGACGTGGTGCGGCTCGACGGC
AACAACCGCGTGCTCGTCGCGCAGGGGCTGCAGCGCATCCGCAACGGCCGCATGCAGCCGGGCATCGCCGCGCTGTTCCG
CGCCGCCGGCCGCGAGGCGCGCACCGCCTCAGGCTTCGACCTCGGCTTCGGCCTCGGCCCGCGCCTGAATGCCGCCGGGC
GGCTCTCGGACATGTCGCTCGGCATCGAATGCCTGATCACCGACGACATCGGCCGCGCGTGGGACCTCGCGCAGCAACTC
GACGTGATGAACCGCGAGCGCCGCGAGATCGAGGCCGGCATGCAGCAACAGGCGCTCGCCGACCTCGCCGACGTCGATCC
GGCCGACGCGTGCACGATCACGCTGTTCAATCCCGAATGGCACCAGGGCGTGATCGGGATCGTCGCCGGGCGGCTCAAGG
AGAAATTCCACCGCCCGTCGTTCACGTTCGCGCATGCGGACGAAGCCGGCACGCGGGTCAAGGGGTCGGGCCGCTCGATT
CCCGGCTTCCACCTGCGCGACGCGCTCGACCTGGTGTCGAAGCGCGAACCCGACCTGATCGTCGCGTTCGGCGGCCACGC
GATGGCGGCCGGCCTCACGCTCGGCACCGACGACGTGCCGCGCTTCGCGGCCGCGTTCGAGGCGGTGGCGCGCGAGTGGC
TGTCCGACGACGCGCTCGCGCGCGTGATCGAGACCGACGGCGAACTGGAAGACGCGTATTTCACGCCGCAGTTCGTCGGG
CTGCTCGACGAAGCCGTCTGGGGCCAGGGCTTTCCGGCCCCGCTTTTCTCCGGCGAGTTCGACGTCGTGTCGCAGTCGCT
CGTGAAGGAAAAGCACCTGAAGCTGCAGCTGGCGCGCGGCCGCCAGCGCTTCAACGCGATCTGGTTCAACCACACCGAGC
CGCTGCCGGCGAGCGCGCTGATCGCGTATCGCCTCGTCGCCGACACGTGGAACGGCGTGACGCGCGTCCAGCTGATCGTC
GAGCACGCGGCCGGCTGA

Upstream 100 bases:

>100_bases
GGCGACACCAGCTCCGTGACGCTGCACGCGACGCGCGGCGACCTGCGCAAGTTCTGGCGCCGCCGCGCGCTGGCGTCCCT
GTTCGAATGACCCCACTCGT

Downstream 100 bases:

>100_bases
GCACCGGCCACCCGGCCCGCGCGCTCGCGGGCCGCATGCGCGCCGCGCCGAACGGGCCACGGCGCGCATGCAAGCACACT
CCGCGTCACCGGGAAACCCC

Product: single-stranded-DNA-specific exonuclease RecJ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 565; Mature: 564

Protein sequence:

>565_residues
MTRIVTRPVAPADAEALARHGLHPVLARLYASRGVQSPTDIETALARLVPPTELKGCADAAALLADAIADKRRLLVVADY
DCDGATACAVAVRGLRMFGAQIDYLVPNRFEYGYGLTPEIVELAAARKPDLLITVDNGIASVAGVEAANARGIDVLVTDH
HLPGDALPAARAIVNPNQPGCAFPSKHIAGVGVMFYVLLALRAELRRRGAFASKEAEPRLDGLLDLVALGTVADVVRLDG
NNRVLVAQGLQRIRNGRMQPGIAALFRAAGREARTASGFDLGFGLGPRLNAAGRLSDMSLGIECLITDDIGRAWDLAQQL
DVMNRERREIEAGMQQQALADLADVDPADACTITLFNPEWHQGVIGIVAGRLKEKFHRPSFTFAHADEAGTRVKGSGRSI
PGFHLRDALDLVSKREPDLIVAFGGHAMAAGLTLGTDDVPRFAAAFEAVAREWLSDDALARVIETDGELEDAYFTPQFVG
LLDEAVWGQGFPAPLFSGEFDVVSQSLVKEKHLKLQLARGRQRFNAIWFNHTEPLPASALIAYRLVADTWNGVTRVQLIV
EHAAG

Sequences:

>Translated_565_residues
MTRIVTRPVAPADAEALARHGLHPVLARLYASRGVQSPTDIETALARLVPPTELKGCADAAALLADAIADKRRLLVVADY
DCDGATACAVAVRGLRMFGAQIDYLVPNRFEYGYGLTPEIVELAAARKPDLLITVDNGIASVAGVEAANARGIDVLVTDH
HLPGDALPAARAIVNPNQPGCAFPSKHIAGVGVMFYVLLALRAELRRRGAFASKEAEPRLDGLLDLVALGTVADVVRLDG
NNRVLVAQGLQRIRNGRMQPGIAALFRAAGREARTASGFDLGFGLGPRLNAAGRLSDMSLGIECLITDDIGRAWDLAQQL
DVMNRERREIEAGMQQQALADLADVDPADACTITLFNPEWHQGVIGIVAGRLKEKFHRPSFTFAHADEAGTRVKGSGRSI
PGFHLRDALDLVSKREPDLIVAFGGHAMAAGLTLGTDDVPRFAAAFEAVAREWLSDDALARVIETDGELEDAYFTPQFVG
LLDEAVWGQGFPAPLFSGEFDVVSQSLVKEKHLKLQLARGRQRFNAIWFNHTEPLPASALIAYRLVADTWNGVTRVQLIV
EHAAG
>Mature_564_residues
TRIVTRPVAPADAEALARHGLHPVLARLYASRGVQSPTDIETALARLVPPTELKGCADAAALLADAIADKRRLLVVADYD
CDGATACAVAVRGLRMFGAQIDYLVPNRFEYGYGLTPEIVELAAARKPDLLITVDNGIASVAGVEAANARGIDVLVTDHH
LPGDALPAARAIVNPNQPGCAFPSKHIAGVGVMFYVLLALRAELRRRGAFASKEAEPRLDGLLDLVALGTVADVVRLDGN
NRVLVAQGLQRIRNGRMQPGIAALFRAAGREARTASGFDLGFGLGPRLNAAGRLSDMSLGIECLITDDIGRAWDLAQQLD
VMNRERREIEAGMQQQALADLADVDPADACTITLFNPEWHQGVIGIVAGRLKEKFHRPSFTFAHADEAGTRVKGSGRSIP
GFHLRDALDLVSKREPDLIVAFGGHAMAAGLTLGTDDVPRFAAAFEAVAREWLSDDALARVIETDGELEDAYFTPQFVGL
LDEAVWGQGFPAPLFSGEFDVVSQSLVKEKHLKLQLARGRQRFNAIWFNHTEPLPASALIAYRLVADTWNGVTRVQLIVE
HAAG

Specific function: Single-stranded-DNA-specific exonuclease. Required for many types of recombinational events, although the stringency of the requirement for recJ appears to vary with the type of recombinational event monitored and the other recombination gene products whi

COG id: COG0608

COG function: function code L; Single-stranded DNA-specific exonuclease

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recJ family [H]

Homologues:

Organism=Escherichia coli, GI1789259, Length=554, Percent_Identity=49.0974729241877, Blast_Score=488, Evalue=1e-139,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003156
- InterPro:   IPR001667
- InterPro:   IPR004610 [H]

Pfam domain/function: PF01368 DHH; PF02272 DHHA1 [H]

EC number: 3.1.-.- [C]

Molecular weight: Translated: 60730; Mature: 60599

Theoretical pI: Translated: 5.93; Mature: 5.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRIVTRPVAPADAEALARHGLHPVLARLYASRGVQSPTDIETALARLVPPTELKGCADA
CCCEECCCCCCCCHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHH
AALLADAIADKRRLLVVADYDCDGATACAVAVRGLRMFGAQIDYLVPNRFEYGYGLTPEI
HHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCEECEECCCCCCCCCCCCHHH
VELAAARKPDLLITVDNGIASVAGVEAANARGIDVLVTDHHLPGDALPAARAIVNPNQPG
HHHHHCCCCCEEEEECCCCHHHHCCCCCCCCCCEEEEECCCCCCCCCHHHHHHCCCCCCC
CAFPSKHIAGVGVMFYVLLALRAELRRRGAFASKEAEPRLDGLLDLVALGTVADVVRLDG
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHEECC
NNRVLVAQGLQRIRNGRMQPGIAALFRAAGREARTASGFDLGFGLGPRLNAAGRLSDMSL
CCEEEHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GIECLITDDIGRAWDLAQQLDVMNRERREIEAGMQQQALADLADVDPADACTITLFNPEW
CEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCH
HQGVIGIVAGRLKEKFHRPSFTFAHADEAGTRVKGSGRSIPGFHLRDALDLVSKREPDLI
HCCHHHHHHHHHHHHHCCCCCEEEECCCCCCEECCCCCCCCCHHHHHHHHHHHCCCCCEE
VAFGGHAMAAGLTLGTDDVPRFAAAFEAVAREWLSDDALARVIETDGELEDAYFTPQFVG
EEECCCCCCCCCEECCCCHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCCCCHHHHH
LLDEAVWGQGFPAPLFSGEFDVVSQSLVKEKHLKLQLARGRQRFNAIWFNHTEPLPASAL
HHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCCCCCHHHH
IAYRLVADTWNGVTRVQLIVEHAAG
HHHHHHHHCCCCHHHHHHHHHHCCC
>Mature Secondary Structure 
TRIVTRPVAPADAEALARHGLHPVLARLYASRGVQSPTDIETALARLVPPTELKGCADA
CCEECCCCCCCCHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHH
AALLADAIADKRRLLVVADYDCDGATACAVAVRGLRMFGAQIDYLVPNRFEYGYGLTPEI
HHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCEECEECCCCCCCCCCCCHHH
VELAAARKPDLLITVDNGIASVAGVEAANARGIDVLVTDHHLPGDALPAARAIVNPNQPG
HHHHHCCCCCEEEEECCCCHHHHCCCCCCCCCCEEEEECCCCCCCCCHHHHHHCCCCCCC
CAFPSKHIAGVGVMFYVLLALRAELRRRGAFASKEAEPRLDGLLDLVALGTVADVVRLDG
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHEECC
NNRVLVAQGLQRIRNGRMQPGIAALFRAAGREARTASGFDLGFGLGPRLNAAGRLSDMSL
CCEEEHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GIECLITDDIGRAWDLAQQLDVMNRERREIEAGMQQQALADLADVDPADACTITLFNPEW
CEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCH
HQGVIGIVAGRLKEKFHRPSFTFAHADEAGTRVKGSGRSIPGFHLRDALDLVSKREPDLI
HCCHHHHHHHHHHHHHCCCCCEEEECCCCCCEECCCCCCCCCHHHHHHHHHHHCCCCCEE
VAFGGHAMAAGLTLGTDDVPRFAAAFEAVAREWLSDDALARVIETDGELEDAYFTPQFVG
EEECCCCCCCCCEECCCCHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCCCCHHHHH
LLDEAVWGQGFPAPLFSGEFDVVSQSLVKEKHLKLQLARGRQRFNAIWFNHTEPLPASAL
HHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCCCCCHHHH
IAYRLVADTWNGVTRVQLIVEHAAG
HHHHHHHHCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on ester bonds [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8168497 [H]