| Definition | Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008390 |
| Length | 3,556,545 |
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The map label for this gene is 115351969
Identifier: 115351969
GI number: 115351969
Start: 2113436
End: 2114656
Strand: Direct
Name: 115351969
Synonym: Bamb_1918
Alternate gene names: NA
Gene position: 2113436-2114656 (Clockwise)
Preceding gene: 115351968
Following gene: 115351970
Centisome position: 59.42
GC content: 70.84
Gene sequence:
>1221_bases ATGAAAACCCTTTGCTCCGATGCCGCGCTGCCGTCCGACGGCCGCACGGCGACTTTCGCGCGCTCGACACTCGTCGCGCT CGTCGTGTTCGCGGCCATCACGCCGCTGCTGCTGCTCGTCGCGCCGGCCGTCGCCGCTCAGCTGGCGACGCAGCTCGGGC TGTCCGCATCGCAGATCGGCACCTACTTCTTCGTCGAACTCGGCGCGTTCAGCCTCGCGACCGTACCGTCGTATCTGTGG CTCGGCCGCATCGATGCGCGCCGCGTCGCTGCGTACGCGATCGCCCTGTTCGGTATGGGCAACCTGCTGACCGCGCTGTG GATGCCGGGCTTCGGCGCGCTGCTCGCGCTGCGTGCCGTCACCGCGCTCGGCGGCGGCTCGCTGATGGTGCTCTGCATGA CCAGCGCGGCCACGAGCGAGAACAGCGATCGCGTGTATGGGCTGTGGGTCGTCGGGCAATTGACCGCCGGCGCCGTCGGC CTGTTCGTGCTGCCGCACGTGTTCGCCGCGTTCGGGCTGCGCGCGCTATATGTCGCGCTGGCCGTGCTCGCGCTGTTCGC GGCGCCGCTGTCGCGCGGCTTTCCAGCGACGCTCGGTGTACGGACCGCGTCGGCACAGGCCGCGCGCGGCGGCGCCGATG CCGATGCGTCACGACGTTTCGTCGTGCTCGCGATCGGCGCGGTGCTGATGTTCTATCTCGCGATCGGCAGCGTGTGGACG TTCGCGAGCCGCGCGGCGGCGCAGGCCGGCCTCGATCCGCAGTCGACCGGCAACGTGCTCGCGATCGCGAGCGTGATGGG GATTGCCGGCGCGGCGCTCGCGTCGTGCGCAGGCGGCCGGTTTGCCAGGCGCGCGATGCTGGCCGCCGGTTACGCGCTGC TCGCGGCATCGCTCGTCGCACTCGCCGCGCTGCCGCATGCGAGCGGCTACAGCGCCGCGATCTTCGCGTTCAAGTTCGCA TGGACGTTCGTGCTGCCGTTCATGCTCGCGACCGTCGCGCAGATCGATACGTCGGGGCGCCTCGTCGCGACGCTCAATTT CGTGATCGGTGCGGGCCTCGCGGCCGGCCCGCTGCTCGCCGGGCTGTTGCTCGATGCCGGCGGCACGATGCATGCACTGT TCGCGGTCGCCACCGCCGGCGCGATCGCGTCGTTCGCCGCGCTGCGCCATCTCGATCGCCGCGCGCGCACGCCCATGACT TCCGTTTCTTCCCAACCGTGA
Upstream 100 bases:
>100_bases GTCTACGAATACGACCCGACGCCGCTTGCCGGCGCATCGCAGTTCGGCGCGATGGTCGGCATGTACCACCTGTTCTGATT CCGTCCAGCGAGATCCCGCC
Downstream 100 bases:
>100_bases CAGGTCGAGCACATCCATGAATCGCACTGCCTTCTTCACCGACGAACGCACCTTCTGGCACACCGGCGGCACGCACGCGC TGTTCTTCCCGGTCGGCGGC
Product: major facilitator transporter
Products: NA
Alternate protein names: Facilitator Superfamily Transporter; MFS-Type Transporter; Facilitator Family Transporter
Number of amino acids: Translated: 406; Mature: 406
Protein sequence:
>406_residues MKTLCSDAALPSDGRTATFARSTLVALVVFAAITPLLLLVAPAVAAQLATQLGLSASQIGTYFFVELGAFSLATVPSYLW LGRIDARRVAAYAIALFGMGNLLTALWMPGFGALLALRAVTALGGGSLMVLCMTSAATSENSDRVYGLWVVGQLTAGAVG LFVLPHVFAAFGLRALYVALAVLALFAAPLSRGFPATLGVRTASAQAARGGADADASRRFVVLAIGAVLMFYLAIGSVWT FASRAAAQAGLDPQSTGNVLAIASVMGIAGAALASCAGGRFARRAMLAAGYALLAASLVALAALPHASGYSAAIFAFKFA WTFVLPFMLATVAQIDTSGRLVATLNFVIGAGLAAGPLLAGLLLDAGGTMHALFAVATAGAIASFAALRHLDRRARTPMT SVSSQP
Sequences:
>Translated_406_residues MKTLCSDAALPSDGRTATFARSTLVALVVFAAITPLLLLVAPAVAAQLATQLGLSASQIGTYFFVELGAFSLATVPSYLW LGRIDARRVAAYAIALFGMGNLLTALWMPGFGALLALRAVTALGGGSLMVLCMTSAATSENSDRVYGLWVVGQLTAGAVG LFVLPHVFAAFGLRALYVALAVLALFAAPLSRGFPATLGVRTASAQAARGGADADASRRFVVLAIGAVLMFYLAIGSVWT FASRAAAQAGLDPQSTGNVLAIASVMGIAGAALASCAGGRFARRAMLAAGYALLAASLVALAALPHASGYSAAIFAFKFA WTFVLPFMLATVAQIDTSGRLVATLNFVIGAGLAAGPLLAGLLLDAGGTMHALFAVATAGAIASFAALRHLDRRARTPMT SVSSQP >Mature_406_residues MKTLCSDAALPSDGRTATFARSTLVALVVFAAITPLLLLVAPAVAAQLATQLGLSASQIGTYFFVELGAFSLATVPSYLW LGRIDARRVAAYAIALFGMGNLLTALWMPGFGALLALRAVTALGGGSLMVLCMTSAATSENSDRVYGLWVVGQLTAGAVG LFVLPHVFAAFGLRALYVALAVLALFAAPLSRGFPATLGVRTASAQAARGGADADASRRFVVLAIGAVLMFYLAIGSVWT FASRAAAQAGLDPQSTGNVLAIASVMGIAGAALASCAGGRFARRAMLAAGYALLAASLVALAALPHASGYSAAIFAFKFA WTFVLPFMLATVAQIDTSGRLVATLNFVIGAGLAAGPLLAGLLLDAGGTMHALFAVATAGAIASFAALRHLDRRARTPMT SVSSQP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41235; Mature: 41235
Theoretical pI: Translated: 10.78; Mature: 10.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTLCSDAALPSDGRTATFARSTLVALVVFAAITPLLLLVAPAVAAQLATQLGLSASQIG CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH TYFFVELGAFSLATVPSYLWLGRIDARRVAAYAIALFGMGNLLTALWMPGFGALLALRAV HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH TALGGGSLMVLCMTSAATSENSDRVYGLWVVGQLTAGAVGLFVLPHVFAAFGLRALYVAL HHCCCCCEEEEEEEHHCCCCCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH AVLALFAAPLSRGFPATLGVRTASAQAARGGADADASRRFVVLAIGAVLMFYLAIGSVWT HHHHHHHHHHHCCCCCHHCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH FASRAAAQAGLDPQSTGNVLAIASVMGIAGAALASCAGGRFARRAMLAAGYALLAASLVA HHHHHHHHCCCCCCCCCCEEHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH LAALPHASGYSAAIFAFKFAWTFVLPFMLATVAQIDTSGRLVATLNFVIGAGLAAGPLLA HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHCCHHHHHHHH GLLLDAGGTMHALFAVATAGAIASFAALRHLDRRARTPMTSVSSQP HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MKTLCSDAALPSDGRTATFARSTLVALVVFAAITPLLLLVAPAVAAQLATQLGLSASQIG CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH TYFFVELGAFSLATVPSYLWLGRIDARRVAAYAIALFGMGNLLTALWMPGFGALLALRAV HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH TALGGGSLMVLCMTSAATSENSDRVYGLWVVGQLTAGAVGLFVLPHVFAAFGLRALYVAL HHCCCCCEEEEEEEHHCCCCCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH AVLALFAAPLSRGFPATLGVRTASAQAARGGADADASRRFVVLAIGAVLMFYLAIGSVWT HHHHHHHHHHHCCCCCHHCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH FASRAAAQAGLDPQSTGNVLAIASVMGIAGAALASCAGGRFARRAMLAAGYALLAASLVA HHHHHHHHCCCCCCCCCCEEHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH LAALPHASGYSAAIFAFKFAWTFVLPFMLATVAQIDTSGRLVATLNFVIGAGLAAGPLLA HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHCCHHHHHHHH GLLLDAGGTMHALFAVATAGAIASFAALRHLDRRARTPMTSVSSQP HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA