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The map label for this gene is yjeF [H]

Identifier: 115351955

GI number: 115351955

Start: 2093842

End: 2095386

Strand: Direct

Name: yjeF [H]

Synonym: Bamb_1904

Alternate gene names: 115351955

Gene position: 2093842-2095386 (Clockwise)

Preceding gene: 115351954

Following gene: 115351956

Centisome position: 58.87

GC content: 75.15

Gene sequence:

>1545_bases
ATGACGAACACCCGCCCGCTTCCCGACTCCGCCCCGCTCGCGCTGCTGCGCGTCGCCGACCTGCGCGCGGCCGAGGCCGC
CGCAACCGCCGAACTGCCGCCGCACACGCTGATGGGCCGCGCGGGCACGGCCGCCGCGCGCTGGCTGTCCGAACGGGTCG
CTGGCAACGAACGCCCGGTCTGGTTCGCGGTCGGCCCCGGCAACAACGGTGGCGACGCGCTGGTGGCCGCCGCGCAGCTG
CAGCAGCTTGGCGTCGCCACGCAGGCGTGGATGCCGCTGGCGGTCAAGCCGGACGATGCGCAATGGGCGCTCGGCCTCGC
GCGCGCGGCCGGCGTGCCGCTGTCGACCGAACCACCCGCGTCGCTGGACGATTACGCGTGGGTCGTCGACGGATTGTTCG
GCATCGGCCTCGGCCGCGCGCTCGACGGCCCGTTCGCCGCCCAGGCCGCGCGCATCGCCGCGCACACACGAAACGGCGGC
CGCGTGCTCGCGCTCGACGTGCCGAGCGGACTGGACAGCGACACAGGCCGGATCGTCGGCGCGGGCGTCGCCGTCGCCGC
GACCCATACGCTCACCTTCATCGGCGCGAAGCCGGGCCTTTACACGGGCGACGGCCGCGATCTCGCCGGCGAGATTCACA
TCGCGTCGCTCGACGTCGCACCGCCCGCCACGCCGGCCGTCGTGCTGAATGCGCCGGCCCGGTTCGCCGCCGCGCTGCCC
GCCCGCGCGTTCGCATCGCACAAGGGCACGTTCGGCAGCCTGGCGGTGCTCGGCGGCGACACCGGCATGTGCGGCGCGCC
GATCCTCGCCGCGCGCGCCGCGCTGTTCGCGGGGGCCGGCAAGGTGCATGTCGGCTTCCTCGGCGCCGGCGCGCCGCCGT
ACGACCCGCCTTTTCCGGAGCTGATGCTGCATCCGGCGGACGGCCTCGATCTCGATGCGATGTCCGCGATCGCGGCAGGC
TGCGGCCTCGGCCCGCGCGAGGCCGCGGCAACCCTCGTGCGTGACGTGCTCGCGCACGACGCCGTGACGCTGCTCGACGC
CGACGCGCTGAACCTCGTCGCGACCCACGCCGAGCTCGCGACCGCCGTTGCCGCCCGCGGCGCGCGCGGCCTCGCGTGCG
TGCTGACGCCGCATCCGCTCGAGGCGGCACGGCTGCTCGGCAGCGATACCGCGACGGTGCAGCAGGATCGGCTGGCCGCG
GCCCAGGCGCTGGCCGCGCGCTACGCGAGCATCGTCGTGCTGAAGGGCTCGGGCACGGTGATTGCCGCGCCCGACGGCCG
CCTGACGGTGAACCCGACCGGCAATGCCGCGCTCGCGACCGGCGGCACCGGCGACGTGCTCGGCGGCCTGATCGGCGCGC
TGCTCGCGCAGCGCGTCGCGCCGTACGAAGCCGCGCTCGCGGGCGTGTATCTGCACGGCCTCGCGGCCGACACATTGACC
GCGAACGGCAACGGCCCGGCCGGCCTCGTCGCGGGCGAACTCGCGCCGATGGTGCGCACGCTGATCAATCGCCTTTTTTA
CCCGTCGCCGCGCGCCGACATATAA

Upstream 100 bases:

>100_bases
CGGCCGACACGCTCGCCGCGCTGAGCGCCGCGCGCTTCACGACCTGACCGCCGCGGGCTCGCCCCCGGGGCGGCTTCCTC
TTCGCCGCCATGACTCCGCG

Downstream 100 bases:

>100_bases
CGCCGCTATACTGAGTGCCCCGCCGCACGGCGGGCCCTCTCGTCCGCCGGCCTTCCGATCCCGATGAGCCGGCGCGGCAT
TCCTCCCGATTCACGCTTCA

Product: carbohydrate kinase, YjeF -like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 514; Mature: 513

Protein sequence:

>514_residues
MTNTRPLPDSAPLALLRVADLRAAEAAATAELPPHTLMGRAGTAAARWLSERVAGNERPVWFAVGPGNNGGDALVAAAQL
QQLGVATQAWMPLAVKPDDAQWALGLARAAGVPLSTEPPASLDDYAWVVDGLFGIGLGRALDGPFAAQAARIAAHTRNGG
RVLALDVPSGLDSDTGRIVGAGVAVAATHTLTFIGAKPGLYTGDGRDLAGEIHIASLDVAPPATPAVVLNAPARFAAALP
ARAFASHKGTFGSLAVLGGDTGMCGAPILAARAALFAGAGKVHVGFLGAGAPPYDPPFPELMLHPADGLDLDAMSAIAAG
CGLGPREAAATLVRDVLAHDAVTLLDADALNLVATHAELATAVAARGARGLACVLTPHPLEAARLLGSDTATVQQDRLAA
AQALAARYASIVVLKGSGTVIAAPDGRLTVNPTGNAALATGGTGDVLGGLIGALLAQRVAPYEAALAGVYLHGLAADTLT
ANGNGPAGLVAGELAPMVRTLINRLFYPSPRADI

Sequences:

>Translated_514_residues
MTNTRPLPDSAPLALLRVADLRAAEAAATAELPPHTLMGRAGTAAARWLSERVAGNERPVWFAVGPGNNGGDALVAAAQL
QQLGVATQAWMPLAVKPDDAQWALGLARAAGVPLSTEPPASLDDYAWVVDGLFGIGLGRALDGPFAAQAARIAAHTRNGG
RVLALDVPSGLDSDTGRIVGAGVAVAATHTLTFIGAKPGLYTGDGRDLAGEIHIASLDVAPPATPAVVLNAPARFAAALP
ARAFASHKGTFGSLAVLGGDTGMCGAPILAARAALFAGAGKVHVGFLGAGAPPYDPPFPELMLHPADGLDLDAMSAIAAG
CGLGPREAAATLVRDVLAHDAVTLLDADALNLVATHAELATAVAARGARGLACVLTPHPLEAARLLGSDTATVQQDRLAA
AQALAARYASIVVLKGSGTVIAAPDGRLTVNPTGNAALATGGTGDVLGGLIGALLAQRVAPYEAALAGVYLHGLAADTLT
ANGNGPAGLVAGELAPMVRTLINRLFYPSPRADI
>Mature_513_residues
TNTRPLPDSAPLALLRVADLRAAEAAATAELPPHTLMGRAGTAAARWLSERVAGNERPVWFAVGPGNNGGDALVAAAQLQ
QLGVATQAWMPLAVKPDDAQWALGLARAAGVPLSTEPPASLDDYAWVVDGLFGIGLGRALDGPFAAQAARIAAHTRNGGR
VLALDVPSGLDSDTGRIVGAGVAVAATHTLTFIGAKPGLYTGDGRDLAGEIHIASLDVAPPATPAVVLNAPARFAAALPA
RAFASHKGTFGSLAVLGGDTGMCGAPILAARAALFAGAGKVHVGFLGAGAPPYDPPFPELMLHPADGLDLDAMSAIAAGC
GLGPREAAATLVRDVLAHDAVTLLDADALNLVATHAELATAVAARGARGLACVLTPHPLEAARLLGSDTATVQQDRLAAA
QALAARYASIVVLKGSGTVIAAPDGRLTVNPTGNAALATGGTGDVLGGLIGALLAQRVAPYEAALAGVYLHGLAADTLTA
NGNGPAGLVAGELAPMVRTLINRLFYPSPRADI

Specific function: Unknown

COG id: COG0063

COG function: function code G; Predicted sugar kinase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 YjeF N-terminal domain [H]

Homologues:

Organism=Homo sapiens, GI119709830, Length=238, Percent_Identity=31.9327731092437, Blast_Score=68, Evalue=2e-11,
Organism=Escherichia coli, GI1790609, Length=513, Percent_Identity=37.8167641325536, Blast_Score=229, Evalue=3e-61,
Organism=Caenorhabditis elegans, GI17554656, Length=240, Percent_Identity=29.1666666666667, Blast_Score=71, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17509719, Length=127, Percent_Identity=29.9212598425197, Blast_Score=65, Evalue=1e-10,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017953
- InterPro:   IPR000631
- InterPro:   IPR004443 [H]

Pfam domain/function: PF01256 Carb_kinase; PF03853 YjeF_N [H]

EC number: NA

Molecular weight: Translated: 51392; Mature: 51261

Theoretical pI: Translated: 6.13; Mature: 6.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNTRPLPDSAPLALLRVADLRAAEAAATAELPPHTLMGRAGTAAARWLSERVAGNERPV
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHCCCCHHHHHHHHHHHCCCCCCE
WFAVGPGNNGGDALVAAAQLQQLGVATQAWMPLAVKPDDAQWALGLARAAGVPLSTEPPA
EEEECCCCCCCHHHHHHHHHHHHCCHHHCCEEEEECCCCCHHHHHHHHHCCCCCCCCCCC
SLDDYAWVVDGLFGIGLGRALDGPFAAQAARIAAHTRNGGRVLALDVPSGLDSDTGRIVG
CCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHEECCCCEEEEEECCCCCCCCCCEEEE
AGVAVAATHTLTFIGAKPGLYTGDGRDLAGEIHIASLDVAPPATPAVVLNAPARFAAALP
CCEEEEEEEEEEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCCEEEEECCHHHHHHCC
ARAFASHKGTFGSLAVLGGDTGMCGAPILAARAALFAGAGKVHVGFLGAGAPPYDPPFPE
HHHHHHCCCCCCEEEEEECCCCCCCCHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCHH
LMLHPADGLDLDAMSAIAAGCGLGPREAAATLVRDVLAHDAVTLLDADALNLVATHAELA
HEECCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCHHEEECCCHHHHHHHHHHHH
TAVAARGARGLACVLTPHPLEAARLLGSDTATVQQDRLAAAQALAARYASIVVLKGSGTV
HHHHHCCCCCEEEEECCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHCEEEEEECCCCEE
IAAPDGRLTVNPTGNAALATGGTGDVLGGLIGALLAQRVAPYEAALAGVYLHGLAADTLT
EECCCCEEEECCCCCEEEECCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHEECCEEE
ANGNGPAGLVAGELAPMVRTLINRLFYPSPRADI
CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
TNTRPLPDSAPLALLRVADLRAAEAAATAELPPHTLMGRAGTAAARWLSERVAGNERPV
CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHCCCCHHHHHHHHHHHCCCCCCE
WFAVGPGNNGGDALVAAAQLQQLGVATQAWMPLAVKPDDAQWALGLARAAGVPLSTEPPA
EEEECCCCCCCHHHHHHHHHHHHCCHHHCCEEEEECCCCCHHHHHHHHHCCCCCCCCCCC
SLDDYAWVVDGLFGIGLGRALDGPFAAQAARIAAHTRNGGRVLALDVPSGLDSDTGRIVG
CCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHEECCCCEEEEEECCCCCCCCCCEEEE
AGVAVAATHTLTFIGAKPGLYTGDGRDLAGEIHIASLDVAPPATPAVVLNAPARFAAALP
CCEEEEEEEEEEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCCEEEEECCHHHHHHCC
ARAFASHKGTFGSLAVLGGDTGMCGAPILAARAALFAGAGKVHVGFLGAGAPPYDPPFPE
HHHHHHCCCCCCEEEEEECCCCCCCCHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCHH
LMLHPADGLDLDAMSAIAAGCGLGPREAAATLVRDVLAHDAVTLLDADALNLVATHAELA
HEECCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCHHEEECCCHHHHHHHHHHHH
TAVAARGARGLACVLTPHPLEAARLLGSDTATVQQDRLAAAQALAARYASIVVLKGSGTV
HHHHHCCCCCEEEEECCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHCEEEEEECCCCEE
IAAPDGRLTVNPTGNAALATGGTGDVLGGLIGALLAQRVAPYEAALAGVYLHGLAADTLT
EECCCCEEEECCCCCEEEECCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHEECCEEE
ANGNGPAGLVAGELAPMVRTLINRLFYPSPRADI
CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503; 7511774 [H]