Definition Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence.
Accession NC_008390
Length 3,556,545

Click here to switch to the map view.

The map label for this gene is pgi

Identifier: 115351956

GI number: 115351956

Start: 2095450

End: 2097120

Strand: Direct

Name: pgi

Synonym: Bamb_1905

Alternate gene names: 115351956

Gene position: 2095450-2097120 (Clockwise)

Preceding gene: 115351955

Following gene: 115351958

Centisome position: 58.92

GC content: 67.32

Gene sequence:

>1671_bases
ATGAGCCGGCGCGGCATTCCTCCCGATTCACGCTTCACTCGAACCGCCATGACGCTGAATTCGCTCCCCGCCTGGACTGC
CCTTCAATCCCACTTCGAACAAATCCGCCATGCGCGGCTGCGCGACTGGTTCGCGCCGGAAAACGACCGCGCGCCGACCC
GTGCCGAACGCTTCACGATTCCCGGCGGCGGCCTTGCGGCCGACTTGTCGAAGAACCGCATCAACGACGACACGCTGCGC
CTGCTCGTGCAACTGGCCCGCGAAGCGGGCGTCGAAGCGCGCCGCGACGCGATGTTCGCCGGCGAGATCGTCAACCCGAC
CGAAGGCCGCGCCGCGTTGCATACGGCATTGCGCGCGACCGACCCGCACGCGCCGTTCCATGCGCAGATCAGCGCCGAGC
GCGCGAAGATGGCGACCTTCGCGCGCGCCGTGCGCAGCGGCGCGTGGACCGGCTACACCGGCAAGCGCATCCGCCACGTG
ATCAACATCGGCATCGGCGGTTCGGATCTCGGCCCGAAGATGGTCACGCATGCGCTGCATCACGTCGCGAGCCCGGACAT
CTCGACTCACTTCGTGTCGAACGTCGACGGCGCCGATCTCGCGCGCGTGCTCGAACAGGTCGATCCGGAGGAAACGCTCG
CGATCATCGTGTCGAAGACTTTCACGACGCTCGAGACGATGACGAACGCACGCTCGCTGCGCGATTGGTTCGTCGCGCGC
GGCTGCCCCGAGGCCGCCCTCGCGAAGCACTTCGTCGGCGTGTCGGCGAACCCGGCCGAAGTCGTGAAGTTCGGCATCGA
CGCGGACAACGTGTTCGAAATGTGGGACTGGGTCGGCGGCCGCTATTCGCTGTGGTCGGCGGTCGGCCTGTCGATCATGA
TCGCGATCGGGCCCGAGCAGTTCGACGAACTGCTCGCCGGCGCGAACGACATGGACCGCCATTTCCGCCAGGCGCCGCTC
GAACGCAACCTGCCGGTGCTGCTCGGCCTGATCGGCATCTGGTACCGCAACTTCTTCGGCTCGCAGAGCTATCTCGTCGC
GCCGTATTCGGAAGCGCTGCACTACCTGCCGTCGTACCTGCAGCAGCTCGAGATGGAAAGCAACGGCAAGTCCGCACGCC
TGGACGGCACGTTCGTCGACTACCCGACGTCGGCCGTCACGTGGGGCGAGCCGGGCACCAACGGCCAGCACGCGTTCTTC
CAGATGCTGCACCAGGGCCCGACGATCGTGCCGATCGACTTCATCGCGGTGCTGACGCCCGAGCATCCGCTCGCGAGCCA
TCATCCGAAGCTGCTCGCGAACTGCTTCGCGCAGAGCGAAGCGCTGATGCTCGGCCGCACGCTCGACGAAGCGCGCAAGG
TCGCCGGCCCCGGCAAGGAAGCGCTCGCGCCGCACCTGACGTTCCCCGGCAACCGGCCGACGACGACGCTGCTGGTGGAT
GCGCTGACGCCGCGCACGCTCGGCGCGCTGATCGCGCTCTACGAGCACAAGGTGCTGGTGCAGGCGACGGTGTGGGACAT
CAATCCGTTCGACCAGTGGGGCGTCGAGCTCGGCAAGATTCTCGGCAAGGTCGTCGAAGCCGACCTGTCGGCCGAGTCGG
TCGATCCCGCGAAGCACGATTCGTCGACGACCGCGCTGATCGAGCGCGCGCGTGCGGCGCTCAAGCGCTGA

Upstream 100 bases:

>100_bases
TCGCCTTTTTTACCCGTCGCCGCGCGCCGACATATAACGCCGCTATACTGAGTGCCCCGCCGCACGGCGGGCCCTCTCGT
CCGCCGGCCTTCCGATCCCG

Downstream 100 bases:

>100_bases
CGCGACAGCGTCTTGCGCATGCCGGTCGCACCGGCAATTGACCGTGTGCGACCGGCGCAAGCATTCAGCGCCGTGCTACG
CGGCCTGCGGCGCGACGATG

Product: glucose-6-phosphate isomerase

Products: NA

Alternate protein names: GPI; Phosphoglucose isomerase; PGI; Phosphohexose isomerase; PHI [H]

Number of amino acids: Translated: 556; Mature: 555

Protein sequence:

>556_residues
MSRRGIPPDSRFTRTAMTLNSLPAWTALQSHFEQIRHARLRDWFAPENDRAPTRAERFTIPGGGLAADLSKNRINDDTLR
LLVQLAREAGVEARRDAMFAGEIVNPTEGRAALHTALRATDPHAPFHAQISAERAKMATFARAVRSGAWTGYTGKRIRHV
INIGIGGSDLGPKMVTHALHHVASPDISTHFVSNVDGADLARVLEQVDPEETLAIIVSKTFTTLETMTNARSLRDWFVAR
GCPEAALAKHFVGVSANPAEVVKFGIDADNVFEMWDWVGGRYSLWSAVGLSIMIAIGPEQFDELLAGANDMDRHFRQAPL
ERNLPVLLGLIGIWYRNFFGSQSYLVAPYSEALHYLPSYLQQLEMESNGKSARLDGTFVDYPTSAVTWGEPGTNGQHAFF
QMLHQGPTIVPIDFIAVLTPEHPLASHHPKLLANCFAQSEALMLGRTLDEARKVAGPGKEALAPHLTFPGNRPTTTLLVD
ALTPRTLGALIALYEHKVLVQATVWDINPFDQWGVELGKILGKVVEADLSAESVDPAKHDSSTTALIERARAALKR

Sequences:

>Translated_556_residues
MSRRGIPPDSRFTRTAMTLNSLPAWTALQSHFEQIRHARLRDWFAPENDRAPTRAERFTIPGGGLAADLSKNRINDDTLR
LLVQLAREAGVEARRDAMFAGEIVNPTEGRAALHTALRATDPHAPFHAQISAERAKMATFARAVRSGAWTGYTGKRIRHV
INIGIGGSDLGPKMVTHALHHVASPDISTHFVSNVDGADLARVLEQVDPEETLAIIVSKTFTTLETMTNARSLRDWFVAR
GCPEAALAKHFVGVSANPAEVVKFGIDADNVFEMWDWVGGRYSLWSAVGLSIMIAIGPEQFDELLAGANDMDRHFRQAPL
ERNLPVLLGLIGIWYRNFFGSQSYLVAPYSEALHYLPSYLQQLEMESNGKSARLDGTFVDYPTSAVTWGEPGTNGQHAFF
QMLHQGPTIVPIDFIAVLTPEHPLASHHPKLLANCFAQSEALMLGRTLDEARKVAGPGKEALAPHLTFPGNRPTTTLLVD
ALTPRTLGALIALYEHKVLVQATVWDINPFDQWGVELGKILGKVVEADLSAESVDPAKHDSSTTALIERARAALKR
>Mature_555_residues
SRRGIPPDSRFTRTAMTLNSLPAWTALQSHFEQIRHARLRDWFAPENDRAPTRAERFTIPGGGLAADLSKNRINDDTLRL
LVQLAREAGVEARRDAMFAGEIVNPTEGRAALHTALRATDPHAPFHAQISAERAKMATFARAVRSGAWTGYTGKRIRHVI
NIGIGGSDLGPKMVTHALHHVASPDISTHFVSNVDGADLARVLEQVDPEETLAIIVSKTFTTLETMTNARSLRDWFVARG
CPEAALAKHFVGVSANPAEVVKFGIDADNVFEMWDWVGGRYSLWSAVGLSIMIAIGPEQFDELLAGANDMDRHFRQAPLE
RNLPVLLGLIGIWYRNFFGSQSYLVAPYSEALHYLPSYLQQLEMESNGKSARLDGTFVDYPTSAVTWGEPGTNGQHAFFQ
MLHQGPTIVPIDFIAVLTPEHPLASHHPKLLANCFAQSEALMLGRTLDEARKVAGPGKEALAPHLTFPGNRPTTTLLVDA
LTPRTLGALIALYEHKVLVQATVWDINPFDQWGVELGKILGKVVEADLSAESVDPAKHDSSTTALIERARAALKR

Specific function: Involved in glycolysis and in gluconeogenesis. [C]

COG id: COG0166

COG function: function code G; Glucose-6-phosphate isomerase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GPI family [H]

Homologues:

Organism=Homo sapiens, GI18201905, Length=541, Percent_Identity=49.3530499075786, Blast_Score=522, Evalue=1e-148,
Organism=Homo sapiens, GI296080693, Length=557, Percent_Identity=45.0628366247756, Blast_Score=464, Evalue=1e-130,
Organism=Escherichia coli, GI1790457, Length=542, Percent_Identity=49.2619926199262, Blast_Score=525, Evalue=1e-150,
Organism=Caenorhabditis elegans, GI71996708, Length=556, Percent_Identity=48.0215827338129, Blast_Score=511, Evalue=1e-145,
Organism=Caenorhabditis elegans, GI71996703, Length=552, Percent_Identity=48.0072463768116, Blast_Score=508, Evalue=1e-144,
Organism=Saccharomyces cerevisiae, GI6319673, Length=542, Percent_Identity=48.1549815498155, Blast_Score=518, Evalue=1e-147,
Organism=Drosophila melanogaster, GI24651916, Length=553, Percent_Identity=49.005424954792, Blast_Score=521, Evalue=1e-148,
Organism=Drosophila melanogaster, GI24651914, Length=553, Percent_Identity=49.005424954792, Blast_Score=521, Evalue=1e-148,
Organism=Drosophila melanogaster, GI17737445, Length=553, Percent_Identity=49.005424954792, Blast_Score=521, Evalue=1e-148,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001672
- InterPro:   IPR023096
- InterPro:   IPR018189 [H]

Pfam domain/function: PF00342 PGI [H]

EC number: =5.3.1.9 [H]

Molecular weight: Translated: 61036; Mature: 60905

Theoretical pI: Translated: 6.90; Mature: 6.90

Prosite motif: PS00765 P_GLUCOSE_ISOMERASE_1 ; PS00174 P_GLUCOSE_ISOMERASE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRRGIPPDSRFTRTAMTLNSLPAWTALQSHFEQIRHARLRDWFAPENDRAPTRAERFTI
CCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEC
PGGGLAADLSKNRINDDTLRLLVQLAREAGVEARRDAMFAGEIVNPTEGRAALHTALRAT
CCCCCCCCCHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCHHHHHHHHHCC
DPHAPFHAQISAERAKMATFARAVRSGAWTGYTGKRIRHVINIGIGGSDLGPKMVTHALH
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHEECCCCCCCCHHHHHHHHH
HVASPDISTHFVSNVDGADLARVLEQVDPEETLAIIVSKTFTTLETMTNARSLRDWFVAR
HHCCCCCHHHHHCCCCHHHHHHHHHHCCCHHHEEEHHHHHHHHHHHHHHHHHHHHHHHHC
GCPEAALAKHFVGVSANPAEVVKFGIDADNVFEMWDWVGGRYSLWSAVGLSIMIAIGPEQ
CCCHHHHHHHHCCCCCCHHHHHEECCCCHHHHHHHHHCCCCHHHHHHHCCEEEEEECHHH
FDELLAGANDMDRHFRQAPLERNLPVLLGLIGIWYRNFFGSQSYLVAPYSEALHYLPSYL
HHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHH
QQLEMESNGKSARLDGTFVDYPTSAVTWGEPGTNGQHAFFQMLHQGPTIVPIDFIAVLTP
HHHHHCCCCCCEEECCEEEECCCCEEECCCCCCCCHHHHHHHHHCCCCEEEEHHEEEECC
EHPLASHHPKLLANCFAQSEALMLGRTLDEARKVAGPGKEALAPHLTFPGNRPTTTLLVD
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCEEEEE
ALTPRTLGALIALYEHKVLVQATVWDINPFDQWGVELGKILGKVVEADLSAESVDPAKHD
CCCHHHHHHHHHHHHCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
SSTTALIERARAALKR
CHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SRRGIPPDSRFTRTAMTLNSLPAWTALQSHFEQIRHARLRDWFAPENDRAPTRAERFTI
CCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEC
PGGGLAADLSKNRINDDTLRLLVQLAREAGVEARRDAMFAGEIVNPTEGRAALHTALRAT
CCCCCCCCCHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCHHHHHHHHHCC
DPHAPFHAQISAERAKMATFARAVRSGAWTGYTGKRIRHVINIGIGGSDLGPKMVTHALH
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHEECCCCCCCCHHHHHHHHH
HVASPDISTHFVSNVDGADLARVLEQVDPEETLAIIVSKTFTTLETMTNARSLRDWFVAR
HHCCCCCHHHHHCCCCHHHHHHHHHHCCCHHHEEEHHHHHHHHHHHHHHHHHHHHHHHHC
GCPEAALAKHFVGVSANPAEVVKFGIDADNVFEMWDWVGGRYSLWSAVGLSIMIAIGPEQ
CCCHHHHHHHHCCCCCCHHHHHEECCCCHHHHHHHHHCCCCHHHHHHHCCEEEEEECHHH
FDELLAGANDMDRHFRQAPLERNLPVLLGLIGIWYRNFFGSQSYLVAPYSEALHYLPSYL
HHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHH
QQLEMESNGKSARLDGTFVDYPTSAVTWGEPGTNGQHAFFQMLHQGPTIVPIDFIAVLTP
HHHHHCCCCCCEEECCEEEECCCCEEECCCCCCCCHHHHHHHHHCCCCEEEEHHEEEECC
EHPLASHHPKLLANCFAQSEALMLGRTLDEARKVAGPGKEALAPHLTFPGNRPTTTLLVD
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCEEEEE
ALTPRTLGALIALYEHKVLVQATVWDINPFDQWGVELGKILGKVVEADLSAESVDPAKHD
CCCHHHHHHHHHHHHCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
SSTTALIERARAALKR
CHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA