| Definition | Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008390 |
| Length | 3,556,545 |
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The map label for this gene is pgi
Identifier: 115351956
GI number: 115351956
Start: 2095450
End: 2097120
Strand: Direct
Name: pgi
Synonym: Bamb_1905
Alternate gene names: 115351956
Gene position: 2095450-2097120 (Clockwise)
Preceding gene: 115351955
Following gene: 115351958
Centisome position: 58.92
GC content: 67.32
Gene sequence:
>1671_bases ATGAGCCGGCGCGGCATTCCTCCCGATTCACGCTTCACTCGAACCGCCATGACGCTGAATTCGCTCCCCGCCTGGACTGC CCTTCAATCCCACTTCGAACAAATCCGCCATGCGCGGCTGCGCGACTGGTTCGCGCCGGAAAACGACCGCGCGCCGACCC GTGCCGAACGCTTCACGATTCCCGGCGGCGGCCTTGCGGCCGACTTGTCGAAGAACCGCATCAACGACGACACGCTGCGC CTGCTCGTGCAACTGGCCCGCGAAGCGGGCGTCGAAGCGCGCCGCGACGCGATGTTCGCCGGCGAGATCGTCAACCCGAC CGAAGGCCGCGCCGCGTTGCATACGGCATTGCGCGCGACCGACCCGCACGCGCCGTTCCATGCGCAGATCAGCGCCGAGC GCGCGAAGATGGCGACCTTCGCGCGCGCCGTGCGCAGCGGCGCGTGGACCGGCTACACCGGCAAGCGCATCCGCCACGTG ATCAACATCGGCATCGGCGGTTCGGATCTCGGCCCGAAGATGGTCACGCATGCGCTGCATCACGTCGCGAGCCCGGACAT CTCGACTCACTTCGTGTCGAACGTCGACGGCGCCGATCTCGCGCGCGTGCTCGAACAGGTCGATCCGGAGGAAACGCTCG CGATCATCGTGTCGAAGACTTTCACGACGCTCGAGACGATGACGAACGCACGCTCGCTGCGCGATTGGTTCGTCGCGCGC GGCTGCCCCGAGGCCGCCCTCGCGAAGCACTTCGTCGGCGTGTCGGCGAACCCGGCCGAAGTCGTGAAGTTCGGCATCGA CGCGGACAACGTGTTCGAAATGTGGGACTGGGTCGGCGGCCGCTATTCGCTGTGGTCGGCGGTCGGCCTGTCGATCATGA TCGCGATCGGGCCCGAGCAGTTCGACGAACTGCTCGCCGGCGCGAACGACATGGACCGCCATTTCCGCCAGGCGCCGCTC GAACGCAACCTGCCGGTGCTGCTCGGCCTGATCGGCATCTGGTACCGCAACTTCTTCGGCTCGCAGAGCTATCTCGTCGC GCCGTATTCGGAAGCGCTGCACTACCTGCCGTCGTACCTGCAGCAGCTCGAGATGGAAAGCAACGGCAAGTCCGCACGCC TGGACGGCACGTTCGTCGACTACCCGACGTCGGCCGTCACGTGGGGCGAGCCGGGCACCAACGGCCAGCACGCGTTCTTC CAGATGCTGCACCAGGGCCCGACGATCGTGCCGATCGACTTCATCGCGGTGCTGACGCCCGAGCATCCGCTCGCGAGCCA TCATCCGAAGCTGCTCGCGAACTGCTTCGCGCAGAGCGAAGCGCTGATGCTCGGCCGCACGCTCGACGAAGCGCGCAAGG TCGCCGGCCCCGGCAAGGAAGCGCTCGCGCCGCACCTGACGTTCCCCGGCAACCGGCCGACGACGACGCTGCTGGTGGAT GCGCTGACGCCGCGCACGCTCGGCGCGCTGATCGCGCTCTACGAGCACAAGGTGCTGGTGCAGGCGACGGTGTGGGACAT CAATCCGTTCGACCAGTGGGGCGTCGAGCTCGGCAAGATTCTCGGCAAGGTCGTCGAAGCCGACCTGTCGGCCGAGTCGG TCGATCCCGCGAAGCACGATTCGTCGACGACCGCGCTGATCGAGCGCGCGCGTGCGGCGCTCAAGCGCTGA
Upstream 100 bases:
>100_bases TCGCCTTTTTTACCCGTCGCCGCGCGCCGACATATAACGCCGCTATACTGAGTGCCCCGCCGCACGGCGGGCCCTCTCGT CCGCCGGCCTTCCGATCCCG
Downstream 100 bases:
>100_bases CGCGACAGCGTCTTGCGCATGCCGGTCGCACCGGCAATTGACCGTGTGCGACCGGCGCAAGCATTCAGCGCCGTGCTACG CGGCCTGCGGCGCGACGATG
Product: glucose-6-phosphate isomerase
Products: NA
Alternate protein names: GPI; Phosphoglucose isomerase; PGI; Phosphohexose isomerase; PHI [H]
Number of amino acids: Translated: 556; Mature: 555
Protein sequence:
>556_residues MSRRGIPPDSRFTRTAMTLNSLPAWTALQSHFEQIRHARLRDWFAPENDRAPTRAERFTIPGGGLAADLSKNRINDDTLR LLVQLAREAGVEARRDAMFAGEIVNPTEGRAALHTALRATDPHAPFHAQISAERAKMATFARAVRSGAWTGYTGKRIRHV INIGIGGSDLGPKMVTHALHHVASPDISTHFVSNVDGADLARVLEQVDPEETLAIIVSKTFTTLETMTNARSLRDWFVAR GCPEAALAKHFVGVSANPAEVVKFGIDADNVFEMWDWVGGRYSLWSAVGLSIMIAIGPEQFDELLAGANDMDRHFRQAPL ERNLPVLLGLIGIWYRNFFGSQSYLVAPYSEALHYLPSYLQQLEMESNGKSARLDGTFVDYPTSAVTWGEPGTNGQHAFF QMLHQGPTIVPIDFIAVLTPEHPLASHHPKLLANCFAQSEALMLGRTLDEARKVAGPGKEALAPHLTFPGNRPTTTLLVD ALTPRTLGALIALYEHKVLVQATVWDINPFDQWGVELGKILGKVVEADLSAESVDPAKHDSSTTALIERARAALKR
Sequences:
>Translated_556_residues MSRRGIPPDSRFTRTAMTLNSLPAWTALQSHFEQIRHARLRDWFAPENDRAPTRAERFTIPGGGLAADLSKNRINDDTLR LLVQLAREAGVEARRDAMFAGEIVNPTEGRAALHTALRATDPHAPFHAQISAERAKMATFARAVRSGAWTGYTGKRIRHV INIGIGGSDLGPKMVTHALHHVASPDISTHFVSNVDGADLARVLEQVDPEETLAIIVSKTFTTLETMTNARSLRDWFVAR GCPEAALAKHFVGVSANPAEVVKFGIDADNVFEMWDWVGGRYSLWSAVGLSIMIAIGPEQFDELLAGANDMDRHFRQAPL ERNLPVLLGLIGIWYRNFFGSQSYLVAPYSEALHYLPSYLQQLEMESNGKSARLDGTFVDYPTSAVTWGEPGTNGQHAFF QMLHQGPTIVPIDFIAVLTPEHPLASHHPKLLANCFAQSEALMLGRTLDEARKVAGPGKEALAPHLTFPGNRPTTTLLVD ALTPRTLGALIALYEHKVLVQATVWDINPFDQWGVELGKILGKVVEADLSAESVDPAKHDSSTTALIERARAALKR >Mature_555_residues SRRGIPPDSRFTRTAMTLNSLPAWTALQSHFEQIRHARLRDWFAPENDRAPTRAERFTIPGGGLAADLSKNRINDDTLRL LVQLAREAGVEARRDAMFAGEIVNPTEGRAALHTALRATDPHAPFHAQISAERAKMATFARAVRSGAWTGYTGKRIRHVI NIGIGGSDLGPKMVTHALHHVASPDISTHFVSNVDGADLARVLEQVDPEETLAIIVSKTFTTLETMTNARSLRDWFVARG CPEAALAKHFVGVSANPAEVVKFGIDADNVFEMWDWVGGRYSLWSAVGLSIMIAIGPEQFDELLAGANDMDRHFRQAPLE RNLPVLLGLIGIWYRNFFGSQSYLVAPYSEALHYLPSYLQQLEMESNGKSARLDGTFVDYPTSAVTWGEPGTNGQHAFFQ MLHQGPTIVPIDFIAVLTPEHPLASHHPKLLANCFAQSEALMLGRTLDEARKVAGPGKEALAPHLTFPGNRPTTTLLVDA LTPRTLGALIALYEHKVLVQATVWDINPFDQWGVELGKILGKVVEADLSAESVDPAKHDSSTTALIERARAALKR
Specific function: Involved in glycolysis and in gluconeogenesis. [C]
COG id: COG0166
COG function: function code G; Glucose-6-phosphate isomerase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GPI family [H]
Homologues:
Organism=Homo sapiens, GI18201905, Length=541, Percent_Identity=49.3530499075786, Blast_Score=522, Evalue=1e-148, Organism=Homo sapiens, GI296080693, Length=557, Percent_Identity=45.0628366247756, Blast_Score=464, Evalue=1e-130, Organism=Escherichia coli, GI1790457, Length=542, Percent_Identity=49.2619926199262, Blast_Score=525, Evalue=1e-150, Organism=Caenorhabditis elegans, GI71996708, Length=556, Percent_Identity=48.0215827338129, Blast_Score=511, Evalue=1e-145, Organism=Caenorhabditis elegans, GI71996703, Length=552, Percent_Identity=48.0072463768116, Blast_Score=508, Evalue=1e-144, Organism=Saccharomyces cerevisiae, GI6319673, Length=542, Percent_Identity=48.1549815498155, Blast_Score=518, Evalue=1e-147, Organism=Drosophila melanogaster, GI24651916, Length=553, Percent_Identity=49.005424954792, Blast_Score=521, Evalue=1e-148, Organism=Drosophila melanogaster, GI24651914, Length=553, Percent_Identity=49.005424954792, Blast_Score=521, Evalue=1e-148, Organism=Drosophila melanogaster, GI17737445, Length=553, Percent_Identity=49.005424954792, Blast_Score=521, Evalue=1e-148,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001672 - InterPro: IPR023096 - InterPro: IPR018189 [H]
Pfam domain/function: PF00342 PGI [H]
EC number: =5.3.1.9 [H]
Molecular weight: Translated: 61036; Mature: 60905
Theoretical pI: Translated: 6.90; Mature: 6.90
Prosite motif: PS00765 P_GLUCOSE_ISOMERASE_1 ; PS00174 P_GLUCOSE_ISOMERASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRRGIPPDSRFTRTAMTLNSLPAWTALQSHFEQIRHARLRDWFAPENDRAPTRAERFTI CCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEC PGGGLAADLSKNRINDDTLRLLVQLAREAGVEARRDAMFAGEIVNPTEGRAALHTALRAT CCCCCCCCCHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCHHHHHHHHHCC DPHAPFHAQISAERAKMATFARAVRSGAWTGYTGKRIRHVINIGIGGSDLGPKMVTHALH CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHEECCCCCCCCHHHHHHHHH HVASPDISTHFVSNVDGADLARVLEQVDPEETLAIIVSKTFTTLETMTNARSLRDWFVAR HHCCCCCHHHHHCCCCHHHHHHHHHHCCCHHHEEEHHHHHHHHHHHHHHHHHHHHHHHHC GCPEAALAKHFVGVSANPAEVVKFGIDADNVFEMWDWVGGRYSLWSAVGLSIMIAIGPEQ CCCHHHHHHHHCCCCCCHHHHHEECCCCHHHHHHHHHCCCCHHHHHHHCCEEEEEECHHH FDELLAGANDMDRHFRQAPLERNLPVLLGLIGIWYRNFFGSQSYLVAPYSEALHYLPSYL HHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHH QQLEMESNGKSARLDGTFVDYPTSAVTWGEPGTNGQHAFFQMLHQGPTIVPIDFIAVLTP HHHHHCCCCCCEEECCEEEECCCCEEECCCCCCCCHHHHHHHHHCCCCEEEEHHEEEECC EHPLASHHPKLLANCFAQSEALMLGRTLDEARKVAGPGKEALAPHLTFPGNRPTTTLLVD CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCEEEEE ALTPRTLGALIALYEHKVLVQATVWDINPFDQWGVELGKILGKVVEADLSAESVDPAKHD CCCHHHHHHHHHHHHCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC SSTTALIERARAALKR CHHHHHHHHHHHHHCC >Mature Secondary Structure SRRGIPPDSRFTRTAMTLNSLPAWTALQSHFEQIRHARLRDWFAPENDRAPTRAERFTI CCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEC PGGGLAADLSKNRINDDTLRLLVQLAREAGVEARRDAMFAGEIVNPTEGRAALHTALRAT CCCCCCCCCHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCHHHHHHHHHCC DPHAPFHAQISAERAKMATFARAVRSGAWTGYTGKRIRHVINIGIGGSDLGPKMVTHALH CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHEECCCCCCCCHHHHHHHHH HVASPDISTHFVSNVDGADLARVLEQVDPEETLAIIVSKTFTTLETMTNARSLRDWFVAR HHCCCCCHHHHHCCCCHHHHHHHHHHCCCHHHEEEHHHHHHHHHHHHHHHHHHHHHHHHC GCPEAALAKHFVGVSANPAEVVKFGIDADNVFEMWDWVGGRYSLWSAVGLSIMIAIGPEQ CCCHHHHHHHHCCCCCCHHHHHEECCCCHHHHHHHHHCCCCHHHHHHHCCEEEEEECHHH FDELLAGANDMDRHFRQAPLERNLPVLLGLIGIWYRNFFGSQSYLVAPYSEALHYLPSYL HHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHH QQLEMESNGKSARLDGTFVDYPTSAVTWGEPGTNGQHAFFQMLHQGPTIVPIDFIAVLTP HHHHHCCCCCCEEECCEEEECCCCEEECCCCCCCCHHHHHHHHHCCCCEEEEHHEEEECC EHPLASHHPKLLANCFAQSEALMLGRTLDEARKVAGPGKEALAPHLTFPGNRPTTTLLVD CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCEEEEE ALTPRTLGALIALYEHKVLVQATVWDINPFDQWGVELGKILGKVVEADLSAESVDPAKHD CCCHHHHHHHHHHHHCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC SSTTALIERARAALKR CHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA