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The map label for this gene is msrB [H]

Identifier: 115351948

GI number: 115351948

Start: 2085095

End: 2085526

Strand: Direct

Name: msrB [H]

Synonym: Bamb_1897

Alternate gene names: 115351948

Gene position: 2085095-2085526 (Clockwise)

Preceding gene: 115351947

Following gene: 115351949

Centisome position: 58.63

GC content: 62.04

Gene sequence:

>432_bases
ATGTCACACGATACCGACGATAAAACCTACCCGTACCAGAAGGATGACGCCGAGCTGCGCCGCCGGCTCACGCCGATGCA
GTACGAGGTCACGCAGCATGCGGCGACCGAGCGCGCGTTCACCGGCGAATACACCGACACCGAAGACGCCGGCATCTACA
AATGCGTCGTCTGCAGCACGCCGCTGTTCGAATCCGGCGCGAAATTCCATTCGGGCTGCGGCTGGCCCAGCTATTTCAAG
CCGCTGAACGGCGAGGTGATCGACGAGAAGATCGACCGCACGCACGGGATGGTGCGCGTCGAGGTCCGCTGCAACCATTG
CGGCGCGCATCTCGGCCACGTGTTCGAGGACGGCCCGCGCGACAAGACCGGTTTGCGGTACTGCATCAATTCGGCTGCGT
TAAACTTCGAGTCCCGACCCGAAAACGAATGA

Upstream 100 bases:

>100_bases
AAGCGTATGCGGCATTGCCGCCCGACTGGGCCGGGTCGCTCGAAGTGAGCTGTTCGTCGTGACCCGCACGACCCGACCGA
CCGATCAGGAGAACTCCCAC

Downstream 100 bases:

>100_bases
GCGGCGCCGGACGGATCGGTCGGACAGCCTTGCCGGCTGCGCCGATCCCGGACGGTGTCGCCTGGCGGGTCCCCACAACG
GTGAAAGGCCGCGCGATGCG

Product: methionine-R-sulfoxide reductase

Products: NA

Alternate protein names: Peptide-methionine (R)-S-oxide reductase [H]

Number of amino acids: Translated: 143; Mature: 142

Protein sequence:

>143_residues
MSHDTDDKTYPYQKDDAELRRRLTPMQYEVTQHAATERAFTGEYTDTEDAGIYKCVVCSTPLFESGAKFHSGCGWPSYFK
PLNGEVIDEKIDRTHGMVRVEVRCNHCGAHLGHVFEDGPRDKTGLRYCINSAALNFESRPENE

Sequences:

>Translated_143_residues
MSHDTDDKTYPYQKDDAELRRRLTPMQYEVTQHAATERAFTGEYTDTEDAGIYKCVVCSTPLFESGAKFHSGCGWPSYFK
PLNGEVIDEKIDRTHGMVRVEVRCNHCGAHLGHVFEDGPRDKTGLRYCINSAALNFESRPENE
>Mature_142_residues
SHDTDDKTYPYQKDDAELRRRLTPMQYEVTQHAATERAFTGEYTDTEDAGIYKCVVCSTPLFESGAKFHSGCGWPSYFKP
LNGEVIDEKIDRTHGMVRVEVRCNHCGAHLGHVFEDGPRDKTGLRYCINSAALNFESRPENE

Specific function: Unknown

COG id: COG0229

COG function: function code O; Conserved domain frequently associated with peptide methionine sulfoxide reductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the msrB Met sulfoxide reductase family [H]

Homologues:

Organism=Homo sapiens, GI37620216, Length=119, Percent_Identity=63.8655462184874, Blast_Score=158, Evalue=1e-39,
Organism=Homo sapiens, GI301336164, Length=119, Percent_Identity=63.8655462184874, Blast_Score=158, Evalue=1e-39,
Organism=Homo sapiens, GI301336162, Length=119, Percent_Identity=63.8655462184874, Blast_Score=158, Evalue=1e-39,
Organism=Homo sapiens, GI73089054, Length=119, Percent_Identity=63.8655462184874, Blast_Score=158, Evalue=1e-39,
Organism=Homo sapiens, GI117606353, Length=130, Percent_Identity=44.6153846153846, Blast_Score=114, Evalue=4e-26,
Organism=Escherichia coli, GI1788077, Length=119, Percent_Identity=51.2605042016807, Blast_Score=135, Evalue=1e-33,
Organism=Caenorhabditis elegans, GI17553450, Length=130, Percent_Identity=43.8461538461538, Blast_Score=117, Evalue=2e-27,
Organism=Caenorhabditis elegans, GI115532676, Length=130, Percent_Identity=43.8461538461538, Blast_Score=117, Evalue=2e-27,
Organism=Saccharomyces cerevisiae, GI6319816, Length=130, Percent_Identity=40, Blast_Score=103, Evalue=8e-24,
Organism=Drosophila melanogaster, GI221378662, Length=139, Percent_Identity=49.6402877697842, Blast_Score=135, Evalue=7e-33,
Organism=Drosophila melanogaster, GI221378664, Length=132, Percent_Identity=50, Blast_Score=134, Evalue=1e-32,
Organism=Drosophila melanogaster, GI24645799, Length=132, Percent_Identity=49.2424242424242, Blast_Score=131, Evalue=1e-31,
Organism=Drosophila melanogaster, GI45553335, Length=132, Percent_Identity=49.2424242424242, Blast_Score=131, Evalue=1e-31,
Organism=Drosophila melanogaster, GI21356369, Length=132, Percent_Identity=49.2424242424242, Blast_Score=131, Evalue=1e-31,
Organism=Drosophila melanogaster, GI24645801, Length=143, Percent_Identity=46.1538461538462, Blast_Score=126, Evalue=6e-30,
Organism=Drosophila melanogaster, GI24645804, Length=143, Percent_Identity=46.1538461538462, Blast_Score=125, Evalue=7e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002579
- InterPro:   IPR011057 [H]

Pfam domain/function: PF01641 SelR [H]

EC number: =1.8.4.12 [H]

Molecular weight: Translated: 16267; Mature: 16136

Theoretical pI: Translated: 5.54; Mature: 5.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.2 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
4.2 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHDTDDKTYPYQKDDAELRRRLTPMQYEVTQHAATERAFTGEYTDTEDAGIYKCVVCST
CCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECC
PLFESGAKFHSGCGWPSYFKPLNGEVIDEKIDRTHGMVRVEVRCNHCGAHLGHVFEDGPR
CHHHCCCCCCCCCCCCHHCCCCCCCHHHHHHHHCCCEEEEEEECCCCCHHHHHHHCCCCC
DKTGLRYCINSAALNFESRPENE
CCHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
SHDTDDKTYPYQKDDAELRRRLTPMQYEVTQHAATERAFTGEYTDTEDAGIYKCVVCST
CCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECC
PLFESGAKFHSGCGWPSYFKPLNGEVIDEKIDRTHGMVRVEVRCNHCGAHLGHVFEDGPR
CHHHCCCCCCCCCCCCHHCCCCCCCHHHHHHHHCCCEEEEEEECCCCCHHHHHHHCCCCC
DKTGLRYCINSAALNFESRPENE
CCHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA