The gene/protein map for NC_008390 is currently unavailable.
Definition Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence.
Accession NC_008390
Length 3,556,545

Click here to switch to the map view.

The map label for this gene is 115351936

Identifier: 115351936

GI number: 115351936

Start: 2065165

End: 2066763

Strand: Direct

Name: 115351936

Synonym: Bamb_1885

Alternate gene names: NA

Gene position: 2065165-2066763 (Clockwise)

Preceding gene: 115351935

Following gene: 115351938

Centisome position: 58.07

GC content: 63.04

Gene sequence:

>1599_bases
ATGGACGACCGCACGCAACAGCTCGACCTGACCGCTCCGATCCCAACCGGAAACATCAAGGCCGCAGCCGCGGCGGCCGG
CGCAACGTCGGCGGACCTGTGGATGGTCCCCTACGAACAGCTGCACTACGATCCGGCTGACAACATCCGGGCGGTTGATA
CCGAATGGGTTGCACACCTGGCCGCGCTGATGCGCGAGAACGGGTACGACAAGGGCTCGCCCCTCCATTGCTACGCCCGG
AAGGTTGACGGTAAAGATCTGCTCTACGTTTACAAGGGGCAGCACCGCTATCTCGCGGCGGGACACGTGATCGCAACCGG
GAAGGATCTGGGGAAGATCCCGGTCGTCGTCCGCGACGCCAAAAACGTGAACCGCGCCGAAATGGTGATCGACGGCTATC
TCAGCAACGACAGCAAACGGTCGTCGCCGCTCGATTTGGCAGGCGTTGTCGCCGAGCTGCGCGACATTCACGGCATGACC
CTCGCGGCCATCTGCAAGCGCCTGAATGTCACTGATCAAACAATCCGCGACGTCGGCCTGCTCGAACGGGCACCGGCTGA
ACTGCATCAGCTCGTACGCGACGGGCAATGCACCGGCACACTGGCGATCGAAGAGATCCGCCGGCATGGGGGTGAAAAGG
CGCTCGAACGCATCGTTGTCGGGATCTCCAAAGCAGCGGAAGCCGGCAAGTCGAAGGTGACGAAGAAGTATCTCGAAGCC
GTGCCCCTACTCGATCCGCTTCAGGACACGGCATCACTGGCAGAGCAGACAACATCCGCAAGCGCCACCGCTAGCCCCGA
ACCTGTCGCCACGTCGACGGCTGCAGACGTTACTGTCGAGACGCACGCGGCGGCACAAGCAGCCCCGCGCCACACGTCTC
CCGCCAAGTTCAGCGAGAAGCAGTCAAAGCAACTTTTGCTGGCGCTGCAGGCTGTCTTGCGCGATGAAGGGTTCGGTAAG
CTCGCGCCGGACACAATCCACGCTGTTCACACGGCGCTGTTGCCGATCAGCGATCTGCTTGATGCGAAGCCCGCCGGGAA
AGTGTGGCCGGTCACGGAACCGGACGAGAGCGGCGGCTGCCAAGCCGTCGAGACCTTGCGCGGTCCCGAGCGAACCGGTC
GGATCAAGGGGCCGCTCGCGCACATTCGCATCGCACAACCGAGACCGGGGGCATGGATTTACGCGATCGAGTACAACACC
GGCACCAGCTTTGCGAGCGACCCTTTGAAGGTATCTCCGCAGACGCGCGCAGTGTGGACGCGCGTTCAGGCGATTCGTTC
GGGCGCCGCGCGGCTCATCGAGACCATCAAGTCACCGATCCACGGGCAGACGAAGGTAGAGCAGGCGGCGTTTAAGAAGA
TTCTCGCGTGGGCGCACGAGATCATCGCTATGCCTGATCCCGATATGACTGTCGAATTCTCGGCAGCCACCGCCAAAGGC
GAGCGCCCCGACCTGACGGACGTGTTAACGGCCATCGAGCACAAGCGGCGGATCAAGTCGAACACGGCGCTGCTGGCCGC
TGCATTTCCGGCGCAGAAGGTAACGCCCGGTCTCGACCCTGCGTCGGCATGGGCGCTCCCGACTGGAGGTGCGAAATGA

Upstream 100 bases:

>100_bases
GTGACGCGAAGCGCGCAGCGGGCATCGAAGCATCAAACGCGATCCACAAAGCGAAGAAGCCTCGCAAGGCTCGCATTGCG
GCGACGCGGGAGGTTGCGTA

Downstream 100 bases:

>100_bases
CCCCGCGCCCGGCCCTTTCTACCCCACGTCCGCTGCCGCGAAAGCGGGAACACGCGAAGAAGCGCTCGGCCATTGCACTG
GCGAGCGTCAACGGCAATTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 532; Mature: 532

Protein sequence:

>532_residues
MDDRTQQLDLTAPIPTGNIKAAAAAAGATSADLWMVPYEQLHYDPADNIRAVDTEWVAHLAALMRENGYDKGSPLHCYAR
KVDGKDLLYVYKGQHRYLAAGHVIATGKDLGKIPVVVRDAKNVNRAEMVIDGYLSNDSKRSSPLDLAGVVAELRDIHGMT
LAAICKRLNVTDQTIRDVGLLERAPAELHQLVRDGQCTGTLAIEEIRRHGGEKALERIVVGISKAAEAGKSKVTKKYLEA
VPLLDPLQDTASLAEQTTSASATASPEPVATSTAADVTVETHAAAQAAPRHTSPAKFSEKQSKQLLLALQAVLRDEGFGK
LAPDTIHAVHTALLPISDLLDAKPAGKVWPVTEPDESGGCQAVETLRGPERTGRIKGPLAHIRIAQPRPGAWIYAIEYNT
GTSFASDPLKVSPQTRAVWTRVQAIRSGAARLIETIKSPIHGQTKVEQAAFKKILAWAHEIIAMPDPDMTVEFSAATAKG
ERPDLTDVLTAIEHKRRIKSNTALLAAAFPAQKVTPGLDPASAWALPTGGAK

Sequences:

>Translated_532_residues
MDDRTQQLDLTAPIPTGNIKAAAAAAGATSADLWMVPYEQLHYDPADNIRAVDTEWVAHLAALMRENGYDKGSPLHCYAR
KVDGKDLLYVYKGQHRYLAAGHVIATGKDLGKIPVVVRDAKNVNRAEMVIDGYLSNDSKRSSPLDLAGVVAELRDIHGMT
LAAICKRLNVTDQTIRDVGLLERAPAELHQLVRDGQCTGTLAIEEIRRHGGEKALERIVVGISKAAEAGKSKVTKKYLEA
VPLLDPLQDTASLAEQTTSASATASPEPVATSTAADVTVETHAAAQAAPRHTSPAKFSEKQSKQLLLALQAVLRDEGFGK
LAPDTIHAVHTALLPISDLLDAKPAGKVWPVTEPDESGGCQAVETLRGPERTGRIKGPLAHIRIAQPRPGAWIYAIEYNT
GTSFASDPLKVSPQTRAVWTRVQAIRSGAARLIETIKSPIHGQTKVEQAAFKKILAWAHEIIAMPDPDMTVEFSAATAKG
ERPDLTDVLTAIEHKRRIKSNTALLAAAFPAQKVTPGLDPASAWALPTGGAK
>Mature_532_residues
MDDRTQQLDLTAPIPTGNIKAAAAAAGATSADLWMVPYEQLHYDPADNIRAVDTEWVAHLAALMRENGYDKGSPLHCYAR
KVDGKDLLYVYKGQHRYLAAGHVIATGKDLGKIPVVVRDAKNVNRAEMVIDGYLSNDSKRSSPLDLAGVVAELRDIHGMT
LAAICKRLNVTDQTIRDVGLLERAPAELHQLVRDGQCTGTLAIEEIRRHGGEKALERIVVGISKAAEAGKSKVTKKYLEA
VPLLDPLQDTASLAEQTTSASATASPEPVATSTAADVTVETHAAAQAAPRHTSPAKFSEKQSKQLLLALQAVLRDEGFGK
LAPDTIHAVHTALLPISDLLDAKPAGKVWPVTEPDESGGCQAVETLRGPERTGRIKGPLAHIRIAQPRPGAWIYAIEYNT
GTSFASDPLKVSPQTRAVWTRVQAIRSGAARLIETIKSPIHGQTKVEQAAFKKILAWAHEIIAMPDPDMTVEFSAATAKG
ERPDLTDVLTAIEHKRRIKSNTALLAAAFPAQKVTPGLDPASAWALPTGGAK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 57035; Mature: 57035

Theoretical pI: Translated: 8.05; Mature: 8.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDDRTQQLDLTAPIPTGNIKAAAAAAGATSADLWMVPYEQLHYDPADNIRAVDTEWVAHL
CCCCCCEEEEECCCCCCCCCHHHHHCCCCCCCEEECCHHHHCCCCCCCCEECCHHHHHHH
AALMRENGYDKGSPLHCYARKVDGKDLLYVYKGQHRYLAAGHVIATGKDLGKIPVVVRDA
HHHHHHCCCCCCCCEEEEEEECCCCEEEEEEECCCEEEEECEEEECCCCCCCCCEEEECC
KNVNRAEMVIDGYLSNDSKRSSPLDLAGVVAELRDIHGMTLAAICKRLNVTDQTIRDVGL
CCCCHHHEEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHH
LERAPAELHQLVRDGQCTGTLAIEEIRRHGGEKALERIVVGISKAAEAGKSKVTKKYLEA
HHCCHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VPLLDPLQDTASLAEQTTSASATASPEPVATSTAADVTVETHAAAQAAPRHTSPAKFSEK
CCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEHHHHHHCCCCCCCCCHHHHH
QSKQLLLALQAVLRDEGFGKLAPDTIHAVHTALLPISDLLDAKPAGKVWPVTEPDESGGC
HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCH
QAVETLRGPERTGRIKGPLAHIRIAQPRPGAWIYAIEYNTGTSFASDPLKVSPQTRAVWT
HHHHHHCCCCCCCCCCCCEEEEEEECCCCCCEEEEEEECCCCCCCCCCCEECCCHHHHHH
RVQAIRSGAARLIETIKSPIHGQTKVEQAAFKKILAWAHEIIAMPDPDMTVEFSAATAKG
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCC
ERPDLTDVLTAIEHKRRIKSNTALLAAAFPAQKVTPGLDPASAWALPTGGAK
CCCCHHHHHHHHHHHHHHHCCCEEEEEECCHHHCCCCCCCHHCCCCCCCCCC
>Mature Secondary Structure
MDDRTQQLDLTAPIPTGNIKAAAAAAGATSADLWMVPYEQLHYDPADNIRAVDTEWVAHL
CCCCCCEEEEECCCCCCCCCHHHHHCCCCCCCEEECCHHHHCCCCCCCCEECCHHHHHHH
AALMRENGYDKGSPLHCYARKVDGKDLLYVYKGQHRYLAAGHVIATGKDLGKIPVVVRDA
HHHHHHCCCCCCCCEEEEEEECCCCEEEEEEECCCEEEEECEEEECCCCCCCCCEEEECC
KNVNRAEMVIDGYLSNDSKRSSPLDLAGVVAELRDIHGMTLAAICKRLNVTDQTIRDVGL
CCCCHHHEEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHH
LERAPAELHQLVRDGQCTGTLAIEEIRRHGGEKALERIVVGISKAAEAGKSKVTKKYLEA
HHCCHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VPLLDPLQDTASLAEQTTSASATASPEPVATSTAADVTVETHAAAQAAPRHTSPAKFSEK
CCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEHHHHHHCCCCCCCCCHHHHH
QSKQLLLALQAVLRDEGFGKLAPDTIHAVHTALLPISDLLDAKPAGKVWPVTEPDESGGC
HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCH
QAVETLRGPERTGRIKGPLAHIRIAQPRPGAWIYAIEYNTGTSFASDPLKVSPQTRAVWT
HHHHHHCCCCCCCCCCCCEEEEEEECCCCCCEEEEEEECCCCCCCCCCCEECCCHHHHHH
RVQAIRSGAARLIETIKSPIHGQTKVEQAAFKKILAWAHEIIAMPDPDMTVEFSAATAKG
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCC
ERPDLTDVLTAIEHKRRIKSNTALLAAAFPAQKVTPGLDPASAWALPTGGAK
CCCCHHHHHHHHHHHHHHHCCCEEEEEECCHHHCCCCCCCHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA