Definition Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence.
Accession NC_008390
Length 3,556,545

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The map label for this gene is 115351935

Identifier: 115351935

GI number: 115351935

Start: 2064803

End: 2065165

Strand: Direct

Name: 115351935

Synonym: Bamb_1884

Alternate gene names: NA

Gene position: 2064803-2065165 (Clockwise)

Preceding gene: 115351934

Following gene: 115351936

Centisome position: 58.06

GC content: 62.53

Gene sequence:

>363_bases
ATGCCGCGAATCAAAGCCCGAACCCTTCCCCTCGTCGACGTCGAACGTCGAGACACCCTCTCGCTTCGTACCATTGCGCG
TTACGACCGCAACGCGAAGCGCCCGACAACACCAATCCTCGTCGGCAAATACGTCGTCGGTCGCCGACCGCTGGCCGATA
GCCTTCACACGCTTTACATGATCCTCGACGGGACAGAGATCGCGGGCACGCAAATCTCCATGCCGAGCGAAGGCGACTGC
GCGAGCGCGGTCAAGCGCCTGCGTGACGCGAAGCGCGCAGCGGGCATCGAAGCATCAAACGCGATCCACAAAGCGAAGAA
GCCTCGCAAGGCTCGCATTGCGGCGACGCGGGAGGTTGCGTAA

Upstream 100 bases:

>100_bases
CAAGACGATCCGGTTGTCGCACCGACGACCGCTTACCACGTCGCCGTCTAATCCGCCCCGACCGTGCCGGGGCATGCGCC
CCGGCGTCATGGAGACCACC

Downstream 100 bases:

>100_bases
TGGACGACCGCACGCAACAGCTCGACCTGACCGCTCCGATCCCAACCGGAAACATCAAGGCCGCAGCCGCGGCGGCCGGC
GCAACGTCGGCGGACCTGTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 120; Mature: 119

Protein sequence:

>120_residues
MPRIKARTLPLVDVERRDTLSLRTIARYDRNAKRPTTPILVGKYVVGRRPLADSLHTLYMILDGTEIAGTQISMPSEGDC
ASAVKRLRDAKRAAGIEASNAIHKAKKPRKARIAATREVA

Sequences:

>Translated_120_residues
MPRIKARTLPLVDVERRDTLSLRTIARYDRNAKRPTTPILVGKYVVGRRPLADSLHTLYMILDGTEIAGTQISMPSEGDC
ASAVKRLRDAKRAAGIEASNAIHKAKKPRKARIAATREVA
>Mature_119_residues
PRIKARTLPLVDVERRDTLSLRTIARYDRNAKRPTTPILVGKYVVGRRPLADSLHTLYMILDGTEIAGTQISMPSEGDCA
SAVKRLRDAKRAAGIEASNAIHKAKKPRKARIAATREVA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13246; Mature: 13114

Theoretical pI: Translated: 11.36; Mature: 11.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRIKARTLPLVDVERRDTLSLRTIARYDRNAKRPTTPILVGKYVVGRRPLADSLHTLYM
CCCCCCCCCCEEECCCCCCHHHHHHHHHCCCCCCCCCCEEECHHHHCCCCCHHHHHEEEH
ILDGTEIAGTQISMPSEGDCASAVKRLRDAKRAAGIEASNAIHKAKKPRKARIAATREVA
EECCCEECCCEECCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHCCCCCCC
>Mature Secondary Structure 
PRIKARTLPLVDVERRDTLSLRTIARYDRNAKRPTTPILVGKYVVGRRPLADSLHTLYM
CCCCCCCCCEEECCCCCCHHHHHHHHHCCCCCCCCCCEEECHHHHCCCCCHHHHHEEEH
ILDGTEIAGTQISMPSEGDCASAVKRLRDAKRAAGIEASNAIHKAKKPRKARIAATREVA
EECCCEECCCEECCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA