The gene/protein map for NC_008390 is currently unavailable.
Definition Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence.
Accession NC_008390
Length 3,556,545

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The map label for this gene is 115351918

Identifier: 115351918

GI number: 115351918

Start: 2047843

End: 2048709

Strand: Direct

Name: 115351918

Synonym: Bamb_1867

Alternate gene names: NA

Gene position: 2047843-2048709 (Clockwise)

Preceding gene: 115351902

Following gene: 115351934

Centisome position: 57.58

GC content: 53.29

Gene sequence:

>867_bases
TTGCCATGCACATCCGCACGGAGCCACAGCATGAGTACGCAGCGACGAACGACAATTAAGCGGCATACGATGAAGCCTTC
ACCAAGCAACTCAATTTCTCGTAGATTTGGTGCAGTGCTCTCGGCGATTTGGCCGTATATCAACGCATTCCTAAAGCATC
AATTTGTGCTCGTCGCAGTAGGATTCGTCCTTACCGGTCTACTCGCGACGCACCTGACCGAGAAGATTAATGACGACCGC
CGACAGCGAGAAGCGACAATCCACGACTACGATCAACTCCGGTCCTCTATCGATGACCTGCTCTCATCGTTCGAACTATA
TGCAGCAGCGTCCAAACATGCGATGCTCGCACTCCAATCTGACCCGGCCGAGCCGATTCGGCTTCAAGCGTACAAGGACT
ATCTGGCTGCCTATGCCACTTGGGTTCAGCGCCACTCGTTTGACTACGTCTCTATTAACCAACGCTTCATACACGGCGAC
ACCGCGAGCACGATCAACAAAATTGGCAGCCTGATGAAGCTTGGGACGGAGCAGTTGGACAACTGCTTCCAGTCGTACTT
CAACAAGGCGGTAACACCTCGGGATAATGAGCGCATCGACCTTTCCTGCGGGGTTGAACCGCCTCAGTTGCCGTTTACCA
TCGGATCGAGATTGATATCGCTGCGCCAATGCATGGATTCGTTCGCGAGAGACATCAGGCTCCATCCTCTCTTCGATCTG
AAAGGCGACGATGCGCGAAATGCCGTAACAGCAATTCGACTCGACGGAATCGATGCTGTATGTTCGCCAGAACGATTGGT
AGGTCTCAAAATGCCGCTGCGCGACCTACCGCGCAAGGTTCAACCAAGTCCTAAACGGGAGGGCTAA

Upstream 100 bases:

>100_bases
CAGTTGCCGTCGCCTGTACTTGCTGTGCGTCTTTCGCCATAAACGCCCCCACAAATGAAAAACCCCGCACAAGGCGGGGC
AAAGTTACTTTTGTTTAGAA

Downstream 100 bases:

>100_bases
CCAGCTCGCCGTCGCCCTGCTCGCGGTGTTTGTGCTTGCTGACCGACTTACCGGCCGCGACAACGTCGTCGGTAAACTCA
GCGCCGCCCGCGACCCTCAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 288; Mature: 287

Protein sequence:

>288_residues
MPCTSARSHSMSTQRRTTIKRHTMKPSPSNSISRRFGAVLSAIWPYINAFLKHQFVLVAVGFVLTGLLATHLTEKINDDR
RQREATIHDYDQLRSSIDDLLSSFELYAAASKHAMLALQSDPAEPIRLQAYKDYLAAYATWVQRHSFDYVSINQRFIHGD
TASTINKIGSLMKLGTEQLDNCFQSYFNKAVTPRDNERIDLSCGVEPPQLPFTIGSRLISLRQCMDSFARDIRLHPLFDL
KGDDARNAVTAIRLDGIDAVCSPERLVGLKMPLRDLPRKVQPSPKREG

Sequences:

>Translated_288_residues
MPCTSARSHSMSTQRRTTIKRHTMKPSPSNSISRRFGAVLSAIWPYINAFLKHQFVLVAVGFVLTGLLATHLTEKINDDR
RQREATIHDYDQLRSSIDDLLSSFELYAAASKHAMLALQSDPAEPIRLQAYKDYLAAYATWVQRHSFDYVSINQRFIHGD
TASTINKIGSLMKLGTEQLDNCFQSYFNKAVTPRDNERIDLSCGVEPPQLPFTIGSRLISLRQCMDSFARDIRLHPLFDL
KGDDARNAVTAIRLDGIDAVCSPERLVGLKMPLRDLPRKVQPSPKREG
>Mature_287_residues
PCTSARSHSMSTQRRTTIKRHTMKPSPSNSISRRFGAVLSAIWPYINAFLKHQFVLVAVGFVLTGLLATHLTEKINDDRR
QREATIHDYDQLRSSIDDLLSSFELYAAASKHAMLALQSDPAEPIRLQAYKDYLAAYATWVQRHSFDYVSINQRFIHGDT
ASTINKIGSLMKLGTEQLDNCFQSYFNKAVTPRDNERIDLSCGVEPPQLPFTIGSRLISLRQCMDSFARDIRLHPLFDLK
GDDARNAVTAIRLDGIDAVCSPERLVGLKMPLRDLPRKVQPSPKREG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32520; Mature: 32388

Theoretical pI: Translated: 9.56; Mature: 9.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPCTSARSHSMSTQRRTTIKRHTMKPSPSNSISRRFGAVLSAIWPYINAFLKHQFVLVAV
CCCCCCCHHCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GFVLTGLLATHLTEKINDDRRQREATIHDYDQLRSSIDDLLSSFELYAAASKHAMLALQS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECC
DPAEPIRLQAYKDYLAAYATWVQRHSFDYVSINQRFIHGDTASTINKIGSLMKLGTEQLD
CCCCCHHHHHHHHHHHHHHHHHHHHCCCEEECCCEEECCCHHHHHHHHHHHHHHHHHHHH
NCFQSYFNKAVTPRDNERIDLSCGVEPPQLPFTIGSRLISLRQCMDSFARDIRLHPLFDL
HHHHHHHHCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEECC
KGDDARNAVTAIRLDGIDAVCSPERLVGLKMPLRDLPRKVQPSPKREG
CCCCCHHHEEEEEECCCCCCCCCHHHHCCCCCHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
PCTSARSHSMSTQRRTTIKRHTMKPSPSNSISRRFGAVLSAIWPYINAFLKHQFVLVAV
CCCCCCHHCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GFVLTGLLATHLTEKINDDRRQREATIHDYDQLRSSIDDLLSSFELYAAASKHAMLALQS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECC
DPAEPIRLQAYKDYLAAYATWVQRHSFDYVSINQRFIHGDTASTINKIGSLMKLGTEQLD
CCCCCHHHHHHHHHHHHHHHHHHHHCCCEEECCCEEECCCHHHHHHHHHHHHHHHHHHHH
NCFQSYFNKAVTPRDNERIDLSCGVEPPQLPFTIGSRLISLRQCMDSFARDIRLHPLFDL
HHHHHHHHCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEECC
KGDDARNAVTAIRLDGIDAVCSPERLVGLKMPLRDLPRKVQPSPKREG
CCCCCHHHEEEEEECCCCCCCCCHHHHCCCCCHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA