Definition Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence.
Accession NC_008390
Length 3,556,545

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The map label for this gene is 115351898

Identifier: 115351898

GI number: 115351898

Start: 2031967

End: 2032446

Strand: Direct

Name: 115351898

Synonym: Bamb_1847

Alternate gene names: NA

Gene position: 2031967-2032446 (Clockwise)

Preceding gene: 115351897

Following gene: 115351899

Centisome position: 57.13

GC content: 63.54

Gene sequence:

>480_bases
ATGCTTGAGCTGACAAGCGAACAGGTCGCCGGCCTTGCCGAGATCGACGCACGCGGATACGTCGAACGCACACGGCAGGA
TCTCGTCAAAGCGGATCCGAAGCTGGCCGACGACGGCACGCTACCCACGCGCCTCTGGAACGCGTACATCGCTGCTCGAC
GGCTTGGCATCCACTCCGATGAGAATGTCGCGGCGTTCCTCCGGATCGAGGCATACGCCCCGAGCTTCTACGAGAAGCCG
GCGACGCGCGCATGGATAATGCGCCCCGGACGCTCTGCCGACGAACGCTTTCACGATTACCTACGCGTCATCAAATGGCG
CATCGAACATCAAAATGTCCAGGGAGGGGCTGAGCATGGCGGGATTGGTGGTGCCGGCAATAGAAGCGGCGATAGTGGAA
CTCGGCCCAGTCTTGGCGCGCGCTGGCGTCGCCTTATTGGGCGGGGCGGCAGTCGCGGGAACGGGGAGCCTGTCGGGTGA

Upstream 100 bases:

>100_bases
GTGACATCGCTGATGGAATTCACGCAGCGCATGCAGTTCTTCGTCCCGACATTTAACTGGCTCGTTGAAGTGAATGGAAA
ACTGAAGGGAGTGCACCCGC

Downstream 100 bases:

>100_bases
CACCCAAAAGGACGAAAGCAAGGCAAAGCCGGACGTCCGGGCGATTCCGCGCACCGGTGAGAGCTGCAAGAAGTGCCCGC
CTGAGACGGGGAGTATGCAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 159; Mature: 159

Protein sequence:

>159_residues
MLELTSEQVAGLAEIDARGYVERTRQDLVKADPKLADDGTLPTRLWNAYIAARRLGIHSDENVAAFLRIEAYAPSFYEKP
ATRAWIMRPGRSADERFHDYLRVIKWRIEHQNVQGGAEHGGIGGAGNRSGDSGTRPSLGARWRRLIGRGGSRGNGEPVG

Sequences:

>Translated_159_residues
MLELTSEQVAGLAEIDARGYVERTRQDLVKADPKLADDGTLPTRLWNAYIAARRLGIHSDENVAAFLRIEAYAPSFYEKP
ATRAWIMRPGRSADERFHDYLRVIKWRIEHQNVQGGAEHGGIGGAGNRSGDSGTRPSLGARWRRLIGRGGSRGNGEPVG
>Mature_159_residues
MLELTSEQVAGLAEIDARGYVERTRQDLVKADPKLADDGTLPTRLWNAYIAARRLGIHSDENVAAFLRIEAYAPSFYEKP
ATRAWIMRPGRSADERFHDYLRVIKWRIEHQNVQGGAEHGGIGGAGNRSGDSGTRPSLGARWRRLIGRGGSRGNGEPVG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17538; Mature: 17538

Theoretical pI: Translated: 10.05; Mature: 10.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLELTSEQVAGLAEIDARGYVERTRQDLVKADPKLADDGTLPTRLWNAYIAARRLGIHSD
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCC
ENVAAFLRIEAYAPSFYEKPATRAWIMRPGRSADERFHDYLRVIKWRIEHQNVQGGAEHG
CCEEEEEEEECCCCHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCC
GIGGAGNRSGDSGTRPSLGARWRRLIGRGGSRGNGEPVG
CCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MLELTSEQVAGLAEIDARGYVERTRQDLVKADPKLADDGTLPTRLWNAYIAARRLGIHSD
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCC
ENVAAFLRIEAYAPSFYEKPATRAWIMRPGRSADERFHDYLRVIKWRIEHQNVQGGAEHG
CCEEEEEEEECCCCHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCC
GIGGAGNRSGDSGTRPSLGARWRRLIGRGGSRGNGEPVG
CCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA