Definition Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence.
Accession NC_008390
Length 3,556,545

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The map label for this gene is 115351892

Identifier: 115351892

GI number: 115351892

Start: 2027012

End: 2028304

Strand: Direct

Name: 115351892

Synonym: Bamb_1841

Alternate gene names: NA

Gene position: 2027012-2028304 (Clockwise)

Preceding gene: 115351891

Following gene: 115351893

Centisome position: 56.99

GC content: 50.43

Gene sequence:

>1293_bases
ATGAGCAAAACAAAAAACAAGGGGAAAGTCGGGGCCAATAAAAGCGTAGGTGGGAATAAGGCCTTGGGGAGCGGTGGAGG
CCCCGTCAATAAAGGGCAGGAATGGAGTGAATCCATTTGCGCTGCGGCCGATGGCAAAGGCACTTTGCTTGGATTACAGC
AACTTGGCCCAGCCAGCAATCCTCAGAATTTGCTCATCACGGCCGCTTTAAGCAACAACCCACAGTGTTTGCTTGCCGCG
GAACAGATCATTCATCTTGTAGATGGATGGAGATATGCAGCCGCTGCGACATCAGCGTTCTTGGCTCATTCGAACGCGGC
CGCCACGCATTTTGCGTATTACGCCGAACTTCGGGCGGCAATGTCGCTCTTCGCATGGAGTGGAATTCGAGCGAAATGGA
ACGGATATTTTTATCTCGATAAGGATGGCAACAAAAAGATAACTACCAAAAACCCACCAACCCATACAGGGATTTGGGAT
ATTTGGAATCAATGGACAAAGAGACCAGACGTAGAATTGCTTCTGGCGAATAGCATCCATTTACATCCAGTCGCGACGTT
GAAGAATGTAGTCAAGGCCATCAACTTCACCATTCCTCAACAAGCGCTGAGTCAATGGGGATCGGATCTTGTAAAAGTGT
CCGAAGACCATACGGCAAGAAATACCGCGAGCTATGAGGCTATCTGGGCTAGCGCTGAACTGACACGAATGGAAACAAAA
GAAGCAGAGTTGGTTCGCGATCTTTGGAAATTGTTCCTTCCGGACGGCGGATCGCTTGGCTTTGACGCAGCTCTGTGTAA
CCACTTTATCTCAAAGCGAGCACCGGAGGACGATGAGGCAGGAAGAAAGGCCTTTGTCGAAAAAGTAGCAAAGCACATCG
CAGATAATTGCGGCGCCCCTACGGAAGAAATTTCACGGCGGATTACCGTAGATTCTTACGTTTCGAAGCCGTTTGTATTG
GCATCCGAAGAAAAGACAAACACCGACAATGTACTCTGTCGTGCGTTTCTACTTCTCCGGATCGCTATGCTCGCTCTCAA
AAGATCACTTAGCGTGCCGGGCGTCTCACCAGTTGCACGCAAGTGGCTCGAAAGCTGGCTCGAGCACGCCGGCTTGTGGT
CGCGCTCTTTTGACATCGATCCGATAGATATCGAGGTCGATTATCGCGACGCAGTGACAGATTTTTCATTCCCACCTCCC
CTGCCAAACTCGCTGTGGGATGGTGAAAACTCATCGCGGTTAGCGAAACTTTCACGCCCCGATGCGTGCATTGCCTGGAG
TCTTGTTGCATGA

Upstream 100 bases:

>100_bases
GCTATGTACTGTTGCAGCAACGATGCTTTGATGCGTTGAAAAACTCCCCCGACGAACTCGTGGCGAGTTCCGCAAATACT
GCTGCGGGGCTTATGAAGCG

Downstream 100 bases:

>100_bases
AGTACATGGGGCACAAAGGAAAACTACTGCCGCTACTTGGAGAAATCTTGAAAGCGGAAGCAGTGAACGCCTCAAAAATC
GCAGATCCTTTTTGCGGATC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 430; Mature: 429

Protein sequence:

>430_residues
MSKTKNKGKVGANKSVGGNKALGSGGGPVNKGQEWSESICAAADGKGTLLGLQQLGPASNPQNLLITAALSNNPQCLLAA
EQIIHLVDGWRYAAAATSAFLAHSNAAATHFAYYAELRAAMSLFAWSGIRAKWNGYFYLDKDGNKKITTKNPPTHTGIWD
IWNQWTKRPDVELLLANSIHLHPVATLKNVVKAINFTIPQQALSQWGSDLVKVSEDHTARNTASYEAIWASAELTRMETK
EAELVRDLWKLFLPDGGSLGFDAALCNHFISKRAPEDDEAGRKAFVEKVAKHIADNCGAPTEEISRRITVDSYVSKPFVL
ASEEKTNTDNVLCRAFLLLRIAMLALKRSLSVPGVSPVARKWLESWLEHAGLWSRSFDIDPIDIEVDYRDAVTDFSFPPP
LPNSLWDGENSSRLAKLSRPDACIAWSLVA

Sequences:

>Translated_430_residues
MSKTKNKGKVGANKSVGGNKALGSGGGPVNKGQEWSESICAAADGKGTLLGLQQLGPASNPQNLLITAALSNNPQCLLAA
EQIIHLVDGWRYAAAATSAFLAHSNAAATHFAYYAELRAAMSLFAWSGIRAKWNGYFYLDKDGNKKITTKNPPTHTGIWD
IWNQWTKRPDVELLLANSIHLHPVATLKNVVKAINFTIPQQALSQWGSDLVKVSEDHTARNTASYEAIWASAELTRMETK
EAELVRDLWKLFLPDGGSLGFDAALCNHFISKRAPEDDEAGRKAFVEKVAKHIADNCGAPTEEISRRITVDSYVSKPFVL
ASEEKTNTDNVLCRAFLLLRIAMLALKRSLSVPGVSPVARKWLESWLEHAGLWSRSFDIDPIDIEVDYRDAVTDFSFPPP
LPNSLWDGENSSRLAKLSRPDACIAWSLVA
>Mature_429_residues
SKTKNKGKVGANKSVGGNKALGSGGGPVNKGQEWSESICAAADGKGTLLGLQQLGPASNPQNLLITAALSNNPQCLLAAE
QIIHLVDGWRYAAAATSAFLAHSNAAATHFAYYAELRAAMSLFAWSGIRAKWNGYFYLDKDGNKKITTKNPPTHTGIWDI
WNQWTKRPDVELLLANSIHLHPVATLKNVVKAINFTIPQQALSQWGSDLVKVSEDHTARNTASYEAIWASAELTRMETKE
AELVRDLWKLFLPDGGSLGFDAALCNHFISKRAPEDDEAGRKAFVEKVAKHIADNCGAPTEEISRRITVDSYVSKPFVLA
SEEKTNTDNVLCRAFLLLRIAMLALKRSLSVPGVSPVARKWLESWLEHAGLWSRSFDIDPIDIEVDYRDAVTDFSFPPPL
PNSLWDGENSSRLAKLSRPDACIAWSLVA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47095; Mature: 46964

Theoretical pI: Translated: 7.88; Mature: 7.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKTKNKGKVGANKSVGGNKALGSGGGPVNKGQEWSESICAAADGKGTLLGLQQLGPASN
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEHHHCCCCCC
PQNLLITAALSNNPQCLLAAEQIIHLVDGWRYAAAATSAFLAHSNAAATHFAYYAELRAA
CCCEEEEEEECCCCCEEHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
MSLFAWSGIRAKWNGYFYLDKDGNKKITTKNPPTHTGIWDIWNQWTKRPDVELLLANSIH
HHHHHHCCCCEEECEEEEEECCCCEEECCCCCCCCCCHHHHHHHHCCCCCEEEEEECCCC
LHPVATLKNVVKAINFTIPQQALSQWGSDLVKVSEDHTARNTASYEAIWASAELTRMETK
CCHHHHHHHHHHHHCCCCCHHHHHHHCHHHEEECCCCCCCCCCCHHHEECCHHHHHHHHH
EAELVRDLWKLFLPDGGSLGFDAALCNHFISKRAPEDDEAGRKAFVEKVAKHIADNCGAP
HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCC
TEEISRRITVDSYVSKPFVLASEEKTNTDNVLCRAFLLLRIAMLALKRSLSVPGVSPVAR
HHHHHHCCCHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH
KWLESWLEHAGLWSRSFDIDPIDIEVDYRDAVTDFSFPPPLPNSLWDGENSSRLAKLSRP
HHHHHHHHHCCCCCCCCCCCCEEEEECCHHHHCCCCCCCCCCCCCCCCCCCCHHHHCCCC
DACIAWSLVA
CCEEEEEECC
>Mature Secondary Structure 
SKTKNKGKVGANKSVGGNKALGSGGGPVNKGQEWSESICAAADGKGTLLGLQQLGPASN
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEHHHCCCCCC
PQNLLITAALSNNPQCLLAAEQIIHLVDGWRYAAAATSAFLAHSNAAATHFAYYAELRAA
CCCEEEEEEECCCCCEEHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
MSLFAWSGIRAKWNGYFYLDKDGNKKITTKNPPTHTGIWDIWNQWTKRPDVELLLANSIH
HHHHHHCCCCEEECEEEEEECCCCEEECCCCCCCCCCHHHHHHHHCCCCCEEEEEECCCC
LHPVATLKNVVKAINFTIPQQALSQWGSDLVKVSEDHTARNTASYEAIWASAELTRMETK
CCHHHHHHHHHHHHCCCCCHHHHHHHCHHHEEECCCCCCCCCCCHHHEECCHHHHHHHHH
EAELVRDLWKLFLPDGGSLGFDAALCNHFISKRAPEDDEAGRKAFVEKVAKHIADNCGAP
HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCC
TEEISRRITVDSYVSKPFVLASEEKTNTDNVLCRAFLLLRIAMLALKRSLSVPGVSPVAR
HHHHHHCCCHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH
KWLESWLEHAGLWSRSFDIDPIDIEVDYRDAVTDFSFPPPLPNSLWDGENSSRLAKLSRP
HHHHHHHHHCCCCCCCCCCCCEEEEECCHHHHCCCCCCCCCCCCCCCCCCCCHHHHCCCC
DACIAWSLVA
CCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA