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The map label for this gene is psiF [H]

Identifier: 115351871

GI number: 115351871

Start: 2008615

End: 2008983

Strand: Direct

Name: psiF [H]

Synonym: Bamb_1820

Alternate gene names: 115351871

Gene position: 2008615-2008983 (Clockwise)

Preceding gene: 115351869

Following gene: 115351872

Centisome position: 56.48

GC content: 61.25

Gene sequence:

>369_bases
ATGCGACCCTGTTCCCGTTGCGCCGGGCTTCGTGACGGCGTCGATATAAAGCGCAATTCACCCCATGGGAGTGTCGAAAT
GAAAATTCAATCGCTCGTAGCCGCAGTGCTTCTCGGCGGCATGCTGGCTTCCCCCGCTTTCGCGGCGAACAGCCAGCAGG
ACAAGATGAAGGCCTGCAACACCCAGGCCACCGGCAAGACGGGCGACGAACGCAAGGCGTTCATGAAGGAATGCCTGTCG
GCCAAGCCCGCGAAGGCAATGACGCAGCAGGAAAAGATGAAGGCCTGCAACACGCAGGCCACCGGCAAGAAAGGCGACGA
CCGCAAGGCGTTCATGAAGAGCTGCCTGAGCAGCCAGCCGGCCGCCTGA

Upstream 100 bases:

>100_bases
TGCGCGCACGCACCGTCAACGGCTATGCGGCCGGCCGCGTTATACGAATGCCGTTTTGGTGTTTTCACATTGATTTGCCA
TAATCGGAGCGCGCGGCGCG

Downstream 100 bases:

>100_bases
GTTCCGGCGCTCCCGCACGAATGCCGCGCACCGCTTCGGCGGGCGCGGCTTTTTTGTTTTCGTTGCACGCGCATCGACGC
GCGCGACGCCGCCCGATGCG

Product: PsiF repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 122; Mature: 122

Protein sequence:

>122_residues
MRPCSRCAGLRDGVDIKRNSPHGSVEMKIQSLVAAVLLGGMLASPAFAANSQQDKMKACNTQATGKTGDERKAFMKECLS
AKPAKAMTQQEKMKACNTQATGKKGDDRKAFMKSCLSSQPAA

Sequences:

>Translated_122_residues
MRPCSRCAGLRDGVDIKRNSPHGSVEMKIQSLVAAVLLGGMLASPAFAANSQQDKMKACNTQATGKTGDERKAFMKECLS
AKPAKAMTQQEKMKACNTQATGKKGDDRKAFMKSCLSSQPAA
>Mature_122_residues
MRPCSRCAGLRDGVDIKRNSPHGSVEMKIQSLVAAVLLGGMLASPAFAANSQQDKMKACNTQATGKTGDERKAFMKECLS
AKPAKAMTQQEKMKACNTQATGKKGDDRKAFMKSCLSSQPAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081731, Length=103, Percent_Identity=43.6893203883495, Blast_Score=66, Evalue=5e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011690 [H]

Pfam domain/function: PF07769 PsiF_repeat [H]

EC number: NA

Molecular weight: Translated: 12984; Mature: 12984

Theoretical pI: Translated: 10.37; Mature: 10.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.9 %Cys     (Translated Protein)
6.6 %Met     (Translated Protein)
11.5 %Cys+Met (Translated Protein)
4.9 %Cys     (Mature Protein)
6.6 %Met     (Mature Protein)
11.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRPCSRCAGLRDGVDIKRNSPHGSVEMKIQSLVAAVLLGGMLASPAFAANSQQDKMKACN
CCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHC
TQATGKTGDERKAFMKECLSAKPAKAMTQQEKMKACNTQATGKKGDDRKAFMKSCLSSQP
CCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCC
AA
CC
>Mature Secondary Structure
MRPCSRCAGLRDGVDIKRNSPHGSVEMKIQSLVAAVLLGGMLASPAFAANSQQDKMKACN
CCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHC
TQATGKTGDERKAFMKECLSAKPAKAMTQQEKMKACNTQATGKKGDDRKAFMKSCLSSQP
CCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCC
AA
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]