Definition Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence.
Accession NC_008390
Length 3,556,545

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The map label for this gene is 115351872

Identifier: 115351872

GI number: 115351872

Start: 2009303

End: 2009761

Strand: Direct

Name: 115351872

Synonym: Bamb_1821

Alternate gene names: NA

Gene position: 2009303-2009761 (Clockwise)

Preceding gene: 115351871

Following gene: 115351873

Centisome position: 56.5

GC content: 70.59

Gene sequence:

>459_bases
ATGGCATGGAGACAACACCGCTGGTTCCGCCGCTGGCTGATCGTGATCGTGTTCTGGGCCGTGCCCGTCGCGATCGTCGC
CGTGCGCGAGATCCGCGAGGAAATGGCGTACAACAAGGCCGACCTGGAACTCGCGCTGACCACCTGGCAGCTCACCGACG
CGCAGCAAGCCGCCGGCGCGGCCGCGAAGTGCCACGGGGATCCTGATGCGGCGCGGGCGGCCGGCTGCCCGGCTGACGTG
CTGAGCGCCAACGCGGCGCGCCAGCAAGCGGCCCGCGACGAATACGTGGTGCGCCGCAATACGCTCGCCGGTTATCTGTG
GCATGCGTTCGTCGGCTATTGGGTCGTACCGGCCGCGTTCCTGTTCGCCTGCGGGGTCGTGATCGCGCTGATCCGCCGTG
CGCTGCGCCGCCCGCCGATCAAGCCGCCCGCTCCGCCGGCGCCGCCCGTCACGCATTGA

Upstream 100 bases:

>100_bases
TTTCTTCTATGATGGCTGCAACGCGGCCCACCCAAGTACAAGAAGCGCCATCGGGCCGCCCTCGAGACGGACGCGCACGC
CGCGTCAAACGGAGGCATGG

Downstream 100 bases:

>100_bases
CGCGCAGCTTATCCTTTCCTTTTTCCGCTAACCGCCTGCCACCCTTCGGGCGTGCGATGCGTCGCCCCACGCGCGCCGCG
CCGTCCGTTGGCGCGCCGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 152; Mature: 151

Protein sequence:

>152_residues
MAWRQHRWFRRWLIVIVFWAVPVAIVAVREIREEMAYNKADLELALTTWQLTDAQQAAGAAAKCHGDPDAARAAGCPADV
LSANAARQQAARDEYVVRRNTLAGYLWHAFVGYWVVPAAFLFACGVVIALIRRALRRPPIKPPAPPAPPVTH

Sequences:

>Translated_152_residues
MAWRQHRWFRRWLIVIVFWAVPVAIVAVREIREEMAYNKADLELALTTWQLTDAQQAAGAAAKCHGDPDAARAAGCPADV
LSANAARQQAARDEYVVRRNTLAGYLWHAFVGYWVVPAAFLFACGVVIALIRRALRRPPIKPPAPPAPPVTH
>Mature_151_residues
AWRQHRWFRRWLIVIVFWAVPVAIVAVREIREEMAYNKADLELALTTWQLTDAQQAAGAAAKCHGDPDAARAAGCPADVL
SANAARQQAARDEYVVRRNTLAGYLWHAFVGYWVVPAAFLFACGVVIALIRRALRRPPIKPPAPPAPPVTH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16904; Mature: 16773

Theoretical pI: Translated: 10.25; Mature: 10.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAWRQHRWFRRWLIVIVFWAVPVAIVAVREIREEMAYNKADLELALTTWQLTDAQQAAGA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHCHHHHHHCC
AAKCHGDPDAARAAGCPADVLSANAARQQAARDEYVVRRNTLAGYLWHAFVGYWVVPAAF
HHHCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LFACGVVIALIRRALRRPPIKPPAPPAPPVTH
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AWRQHRWFRRWLIVIVFWAVPVAIVAVREIREEMAYNKADLELALTTWQLTDAQQAAGA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHCHHHHHHCC
AAKCHGDPDAARAAGCPADVLSANAARQQAARDEYVVRRNTLAGYLWHAFVGYWVVPAAF
HHHCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LFACGVVIALIRRALRRPPIKPPAPPAPPVTH
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA