The gene/protein map for NC_008390 is currently unavailable.
Definition Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence.
Accession NC_008390
Length 3,556,545

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The map label for this gene is 115351834

Identifier: 115351834

GI number: 115351834

Start: 1970895

End: 1971506

Strand: Direct

Name: 115351834

Synonym: Bamb_1783

Alternate gene names: NA

Gene position: 1970895-1971506 (Clockwise)

Preceding gene: 115351831

Following gene: 115351835

Centisome position: 55.42

GC content: 70.1

Gene sequence:

>612_bases
ATGCTGAAAAAGCTGCTGATGCTGTTCGTCGCGCTGTCGCTGTCGCTTGCCGCCGGCCTCGCCGCGGCCGTCGAAGTCAA
CACGGCCGATCAGGCCGCGCTCGAAGCGGTGAAGGGGCTCGGGCCCGTGAAGTCGAAGGCGATCATCGACGAACGCACCA
AGAACGGCCCGTTCAAGGACGCGGACGATCTCGCGAACCGCGTGAAGGGTCTCGGCACGAAGTCGGTCGGGCATCTCGAG
GAAAACGGCCTGACGATCGGCGGCTCGTCGACGCCGCCGAAGGGCGTGAAGCTGTCGAAGCCGGCCGCGACGACGTCGGC
AACCACGTCGGCCACGACGTCGGCAGGCACCGCATCGACGCCGACGACCACGACGACCGGCACGACGGCAACCGCACCGG
CCGCCAGCGCGCCGGAAGCGGCGGCCAAGCCGGCCAAGAGCAAGCGCGCATCGAAGAAGGAGAAGGCGGCCGCAGCCGCG
GCGGCATCCGCCGATGCAGGCGCGGGCGCGAGCGCGCCGGCCGCGGCGTCGTCCACGAAGGCGACCAAGGGTTCGAAGAA
GAAGAGCAAGAAGGACAAGGCAGCCTCCGCCGCCGCGGCGTCGGGCGCCTGA

Upstream 100 bases:

>100_bases
GCACGCATTTGTCCTATGCTTAACGGCGACGCCCGGCCGGGCCTCGTCCAGTCGTCCGTTGCAACGCCCATTCATCCGTC
AGAACCAGGGAGCCCTTGCC

Downstream 100 bases:

>100_bases
TGTGCGTCGCGCGCGCGACGGCGTGCGCGCGGCTTTCGATCAACGGGCGCCGTTGCTGCGGCGCCCTTTTCAGTGAAGGT
GAAGAACCATGGGTCTCCTC

Product: hypothetical protein

Products: NA

Alternate protein names: DNA Uptake Protein; ComEA-Related Signal Peptide Protein; Competence Protein ComEA Helix-Hairpin-Helix Region; DNA Uptake Protein ComEA-Like; Helix-Turn-Helix Protein; Helix-Hairpin-Helix Motif; ComE Protein; Helix-Hairpin-Helix Motif Protein

Number of amino acids: Translated: 203; Mature: 203

Protein sequence:

>203_residues
MLKKLLMLFVALSLSLAAGLAAAVEVNTADQAALEAVKGLGPVKSKAIIDERTKNGPFKDADDLANRVKGLGTKSVGHLE
ENGLTIGGSSTPPKGVKLSKPAATTSATTSATTSAGTASTPTTTTTGTTATAPAASAPEAAAKPAKSKRASKKEKAAAAA
AASADAGAGASAPAAASSTKATKGSKKKSKKDKAASAAAASGA

Sequences:

>Translated_203_residues
MLKKLLMLFVALSLSLAAGLAAAVEVNTADQAALEAVKGLGPVKSKAIIDERTKNGPFKDADDLANRVKGLGTKSVGHLE
ENGLTIGGSSTPPKGVKLSKPAATTSATTSATTSAGTASTPTTTTTGTTATAPAASAPEAAAKPAKSKRASKKEKAAAAA
AASADAGAGASAPAAASSTKATKGSKKKSKKDKAASAAAASGA
>Mature_203_residues
MLKKLLMLFVALSLSLAAGLAAAVEVNTADQAALEAVKGLGPVKSKAIIDERTKNGPFKDADDLANRVKGLGTKSVGHLE
ENGLTIGGSSTPPKGVKLSKPAATTSATTSATTSAGTASTPTTTTTGTTATAPAASAPEAAAKPAKSKRASKKEKAAAAA
AASADAGAGASAPAAASSTKATKGSKKKSKKDKAASAAAASGA

Specific function: Unknown

COG id: COG1555

COG function: function code L; DNA uptake protein and related DNA-binding proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19515; Mature: 19515

Theoretical pI: Translated: 10.86; Mature: 10.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKKLLMLFVALSLSLAAGLAAAVEVNTADQAALEAVKGLGPVKSKAIIDERTKNGPFKD
CHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCC
ADDLANRVKGLGTKSVGHLEENGLTIGGSSTPPKGVKLSKPAATTSATTSATTSAGTAST
HHHHHHHHHCCCCCCCCCHHCCCEEECCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCC
PTTTTTGTTATAPAASAPEAAAKPAKSKRASKKEKAAAAAAASADAGAGASAPAAASSTK
CCCCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCH
ATKGSKKKSKKDKAASAAAASGA
HHCCCHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MLKKLLMLFVALSLSLAAGLAAAVEVNTADQAALEAVKGLGPVKSKAIIDERTKNGPFKD
CHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCC
ADDLANRVKGLGTKSVGHLEENGLTIGGSSTPPKGVKLSKPAATTSATTSATTSAGTAST
HHHHHHHHHCCCCCCCCCHHCCCEEECCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCC
PTTTTTGTTATAPAASAPEAAAKPAKSKRASKKEKAAAAAAASADAGAGASAPAAASSTK
CCCCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCH
ATKGSKKKSKKDKAASAAAASGA
HHCCCHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA