Definition Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence.
Accession NC_008390
Length 3,556,545

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The map label for this gene is 115351671

Identifier: 115351671

GI number: 115351671

Start: 1791178

End: 1791453

Strand: Direct

Name: 115351671

Synonym: Bamb_1618

Alternate gene names: NA

Gene position: 1791178-1791453 (Clockwise)

Preceding gene: 115351667

Following gene: 115351673

Centisome position: 50.36

GC content: 68.84

Gene sequence:

>276_bases
ATGACTCAGGAGAAAAGAATGGCTACAGCTTCGAACGCACGACAGACGAACGACGCGGGATCGACGGACGAACGCCGCCG
CGACGGCCAGCGAACCGTGACGCCGACGCGCACGCGGTTACGGGGGCCCGCGGCGGTCTCGCAAGTGGGCTCGCGCCGAG
CCGAACGTGGCGGCAGCGACGGGAACGGGCCGGTGACGCCGACCAGCGCAGAAGAGGCCGGGAAACCGCTATGGGAGGAC
GACAGCGGCGAGATGCCGCCGGAAGAGTGGTCGTGA

Upstream 100 bases:

>100_bases
TCGTCTCCTCCGGAACGGTTAGCGGGCGAAGCGAGAGAGCAAGACGCTTGCCCGGCGCGCGGCATCGAAATTGCTGCGTT
CGGGCGACCGGTTTCCCTCG

Downstream 100 bases:

>100_bases
GGTCGTAGAGGGCGCCGCATCGATGCGTCATGGCCAATGCGAATGCCCGGATTGCCGCGCCCTCGTTGCCGTTATGACAC
ACGGCGCTCGCTTGCGCGCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 91; Mature: 90

Protein sequence:

>91_residues
MTQEKRMATASNARQTNDAGSTDERRRDGQRTVTPTRTRLRGPAAVSQVGSRRAERGGSDGNGPVTPTSAEEAGKPLWED
DSGEMPPEEWS

Sequences:

>Translated_91_residues
MTQEKRMATASNARQTNDAGSTDERRRDGQRTVTPTRTRLRGPAAVSQVGSRRAERGGSDGNGPVTPTSAEEAGKPLWED
DSGEMPPEEWS
>Mature_90_residues
TQEKRMATASNARQTNDAGSTDERRRDGQRTVTPTRTRLRGPAAVSQVGSRRAERGGSDGNGPVTPTSAEEAGKPLWEDD
SGEMPPEEWS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9843; Mature: 9711

Theoretical pI: Translated: 5.19; Mature: 5.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQEKRMATASNARQTNDAGSTDERRRDGQRTVTPTRTRLRGPAAVSQVGSRRAERGGSD
CCCCHHHHHHCCCCCCCCCCCCHHHHHCCCCCCCCCCHHHCCCHHHHHHHHHHHHCCCCC
GNGPVTPTSAEEAGKPLWEDDSGEMPPEEWS
CCCCCCCCCHHHCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TQEKRMATASNARQTNDAGSTDERRRDGQRTVTPTRTRLRGPAAVSQVGSRRAERGGSD
CCCHHHHHHCCCCCCCCCCCCHHHHHCCCCCCCCCCHHHCCCHHHHHHHHHHHHCCCCC
GNGPVTPTSAEEAGKPLWEDDSGEMPPEEWS
CCCCCCCCCHHHCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA