| Definition | Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008390 |
| Length | 3,556,545 |
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The map label for this gene is 115351654
Identifier: 115351654
GI number: 115351654
Start: 1776742
End: 1777125
Strand: Direct
Name: 115351654
Synonym: Bamb_1601
Alternate gene names: NA
Gene position: 1776742-1777125 (Clockwise)
Preceding gene: 115351653
Following gene: 115351655
Centisome position: 49.96
GC content: 62.76
Gene sequence:
>384_bases ATGGCGCTGATCGACCACCTCGACCATCTCGTCCTGACTTGCGTCGATCCGGAGCGGACGAAGCATTTCTATACCGAAGT GCTGCAGATGCAGCTCGAAACCTTCGGCGCGGGCCGGCTCGCGTTCCGCTTCGGCAACCAGAAGATCAACCTGCACGTGC GCGGCGCGGAGTTCGAGCCGAAGGCGCACGTGCCGGTGCCGGGCGCGCTCGACCTGTGCTTCATCGCGTCGGTGCCACTC GACGACGTGATCGCGCATCTGGGACGCGTCGAATGGCCGATCGTCGAAGGGCCCGTCGAACGCACCGGGGCGACGCAGAA GATCCGGTCGGTGTACGTGCGTGACCCGGATTTGAACTTGATCGAGATCTCTGAATTGATTTGA
Upstream 100 bases:
>100_bases GGGCGCCGCTCGGACCTGCATCCGGCACCGCGCGCCGAAGCCGGCGACATGCCGGCGCAGCGGGCTTTCTCGTGAACAGT CGTCAACAGGAGCGAATCAC
Downstream 100 bases:
>100_bases GGGGCTCGTCGGGGCGCTTGGTCGTGTTGCTTTGTCGTGTTGCTTCGTCGTTTGCTTTGTCGCGTTGCTTCGTCGTGCCG GTTTGCCCGCTTGCTCGTTT
Product: glyoxalase/bleomycin resistance protein/dioxygenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 127; Mature: 126
Protein sequence:
>127_residues MALIDHLDHLVLTCVDPERTKHFYTEVLQMQLETFGAGRLAFRFGNQKINLHVRGAEFEPKAHVPVPGALDLCFIASVPL DDVIAHLGRVEWPIVEGPVERTGATQKIRSVYVRDPDLNLIEISELI
Sequences:
>Translated_127_residues MALIDHLDHLVLTCVDPERTKHFYTEVLQMQLETFGAGRLAFRFGNQKINLHVRGAEFEPKAHVPVPGALDLCFIASVPL DDVIAHLGRVEWPIVEGPVERTGATQKIRSVYVRDPDLNLIEISELI >Mature_126_residues ALIDHLDHLVLTCVDPERTKHFYTEVLQMQLETFGAGRLAFRFGNQKINLHVRGAEFEPKAHVPVPGALDLCFIASVPLD DVIAHLGRVEWPIVEGPVERTGATQKIRSVYVRDPDLNLIEISELI
Specific function: Is critically involved in promoting the replication of S.typhimurium cells inside host macrophages, suggesting a role in the establishment of bacterial colonization within macrophages. May be involved in the biosynthesis and modification of the peptidogly
COG id: COG0346
COG function: function code E; Lactoylglutathione lyase and related lyases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI254039722, Length=126, Percent_Identity=53.1746031746032, Blast_Score=134, Evalue=2e-32,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004360 [H]
Pfam domain/function: PF00903 Glyoxalase [H]
EC number: NA
Molecular weight: Translated: 14280; Mature: 14149
Theoretical pI: Translated: 5.52; Mature: 5.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALIDHLDHLVLTCVDPERTKHFYTEVLQMQLETFGAGRLAFRFGNQKINLHVRGAEFEP CCHHHHHCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCEEEEEEEECCCCCC KAHVPVPGALDLCFIASVPLDDVIAHLGRVEWPIVEGPVERTGATQKIRSVYVRDPDLNL CCCCCCCCCHHEEEEECCCHHHHHHHHCCCCCCEECCCCCCCCHHHHHHEEEEECCCCCE IEISELI EEHHHCC >Mature Secondary Structure ALIDHLDHLVLTCVDPERTKHFYTEVLQMQLETFGAGRLAFRFGNQKINLHVRGAEFEP CHHHHHCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCEEEEEEEECCCCCC KAHVPVPGALDLCFIASVPLDDVIAHLGRVEWPIVEGPVERTGATQKIRSVYVRDPDLNL CCCCCCCCCHHEEEEECCCHHHHHHHHCCCCCCEECCCCCCCCHHHHHHEEEEECCCCCE IEISELI EEHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11677609 [H]