| Definition | Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008390 |
| Length | 3,556,545 |
Click here to switch to the map view.
The map label for this gene is 115351655
Identifier: 115351655
GI number: 115351655
Start: 1777520
End: 1778326
Strand: Direct
Name: 115351655
Synonym: Bamb_1602
Alternate gene names: NA
Gene position: 1777520-1778326 (Clockwise)
Preceding gene: 115351654
Following gene: 115351656
Centisome position: 49.98
GC content: 70.38
Gene sequence:
>807_bases ATGGACCGCGCGGCGCTCGACGCTGCCTACCTCAACACGAGAGCCATTGCCGATTTCCCGGCCGTGCTCGCATCGTGCCA GGCACGCAGCAGGGCGCTTTACGACGCGACGCCCGGGCAGCGCGACGTCCATTACGGCGCGCGCCCCGCGCAGCGCTTCG ACTGGCTGCGCTGCGGCCGGCCCGACGCGCCGCTGTTCGTGTTCATTCACGGCGGCTACTGGCAGCACTGCGCGAAAGAG GATTTCGCGTACGCGGCAGCCGGGCCGCTCGCGCGCGGCTTCGACGTCGTGCTCGCGGAATACACGCTTGCCCCGGCCGC ATCGATGACCGACATCGTCGGCGAGATCGGCGCGTTGCTCGACTACCTGTCGATCGATCCCGACGGCATCGGCACCGCAG GACGGCCGATCCACCTGAGCGGTCACTCGGCGGGCGGCCACCTGACGGCCGTGCATCGCGCGCATCCGGCCGTCGTGTCG GCGCTTGCGATCAGCCCGCTCGTCGATCTCGAACCGATCTCGCTGTGCGTGCTTAACGACAGACTGCAGCTCACCGCGCA CGAAATCGCCGCGTACAGCCCGCTGCGTCATATCGGGCCCGGCGCGCCGACCGTCGTCGCGGTCGGCGCGGCCGAGTTGC CGGAACTCGTACGCCACGCCCACGAATATGCGCACGCATGCGAGGCGGCCGGCGAGCGGATCGCGCGCGCGTGGCTGCCC GGCATGCAGCATTTCACGGTGCTCGACGATCTCGCGACGCCCGACAGCGCGATGCTCGCCGCGTTGCAGGCGATCGCGCC GCGCTGA
Upstream 100 bases:
>100_bases GCGCCTTCGCCGCGGGCACCGCGAATCCCGCGTAATCCGCCTATCCGCGTATTCGCCTATCCGACCGGACGCTTTCCGAA TGACGATCCTCTATCGTGGC
Downstream 100 bases:
>100_bases GCGCGACGTATTGCGCCGATTCGTACTAATCCGCACGAATCCGCACGGCTTCGCCCCGAGTCACACCGGTTCGCGCCGCG CGCGGCCGGGCGTATGATCG
Product: esterase/lipase-like protein
Products: NA
Alternate protein names: Esterase/Lipase/Thioesterase; Esterase/Lipase-Like Protein; Arylformamidase; Esterase/Lipase; N-Acetylanthranilate Amidase; Lipase/Esterase; Esterase/Lipase/Thiestherase Protein; Aylformamidase; Lipase; Kynurenine Formamidase; Alpha/Beta Hydrolase; Alpha/Beta Hydrolase Domain-Containing Protein; Hydrolase; Alpha/Beta Hydrolase Fold-3 Domain-Containing Protein
Number of amino acids: Translated: 268; Mature: 268
Protein sequence:
>268_residues MDRAALDAAYLNTRAIADFPAVLASCQARSRALYDATPGQRDVHYGARPAQRFDWLRCGRPDAPLFVFIHGGYWQHCAKE DFAYAAAGPLARGFDVVLAEYTLAPAASMTDIVGEIGALLDYLSIDPDGIGTAGRPIHLSGHSAGGHLTAVHRAHPAVVS ALAISPLVDLEPISLCVLNDRLQLTAHEIAAYSPLRHIGPGAPTVVAVGAAELPELVRHAHEYAHACEAAGERIARAWLP GMQHFTVLDDLATPDSAMLAALQAIAPR
Sequences:
>Translated_268_residues MDRAALDAAYLNTRAIADFPAVLASCQARSRALYDATPGQRDVHYGARPAQRFDWLRCGRPDAPLFVFIHGGYWQHCAKE DFAYAAAGPLARGFDVVLAEYTLAPAASMTDIVGEIGALLDYLSIDPDGIGTAGRPIHLSGHSAGGHLTAVHRAHPAVVS ALAISPLVDLEPISLCVLNDRLQLTAHEIAAYSPLRHIGPGAPTVVAVGAAELPELVRHAHEYAHACEAAGERIARAWLP GMQHFTVLDDLATPDSAMLAALQAIAPR >Mature_268_residues MDRAALDAAYLNTRAIADFPAVLASCQARSRALYDATPGQRDVHYGARPAQRFDWLRCGRPDAPLFVFIHGGYWQHCAKE DFAYAAAGPLARGFDVVLAEYTLAPAASMTDIVGEIGALLDYLSIDPDGIGTAGRPIHLSGHSAGGHLTAVHRAHPAVVS ALAISPLVDLEPISLCVLNDRLQLTAHEIAAYSPLRHIGPGAPTVVAVGAAELPELVRHAHEYAHACEAAGERIARAWLP GMQHFTVLDDLATPDSAMLAALQAIAPR
Specific function: Unknown
COG id: COG0657
COG function: function code I; Esterase/lipase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI192807282, Length=210, Percent_Identity=28.0952380952381, Blast_Score=88, Evalue=7e-18, Organism=Homo sapiens, GI224465228, Length=217, Percent_Identity=28.5714285714286, Blast_Score=84, Evalue=1e-16, Organism=Drosophila melanogaster, GI19920830, Length=228, Percent_Identity=26.3157894736842, Blast_Score=76, Evalue=3e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28454; Mature: 28454
Theoretical pI: Translated: 6.26; Mature: 6.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDRAALDAAYLNTRAIADFPAVLASCQARSRALYDATPGQRDVHYGARPAQRFDWLRCGR CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEECCCCCCCCCCCCCCHHHHHHHHHCCC PDAPLFVFIHGGYWQHCAKEDFAYAAAGPLARGFDVVLAEYTLAPAASMTDIVGEIGALL CCCCEEEEEECCHHHHHHHHHCHHHHCCCHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHH DYLSIDPDGIGTAGRPIHLSGHSAGGHLTAVHRAHPAVVSALAISPLVDLEPISLCVLND HHHCCCCCCCCCCCCEEEECCCCCCCCEEEEHHHHHHHHHHHHHCCCCCCCCEEEEEECC RLQLTAHEIAAYSPLRHIGPGAPTVVAVGAAELPELVRHAHEYAHACEAAGERIARAWLP CHHHHHHHHHHHCCHHHCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC GMQHFTVLDDLATPDSAMLAALQAIAPR CCHHHHHHHHHCCCHHHHHHHHHHHCCC >Mature Secondary Structure MDRAALDAAYLNTRAIADFPAVLASCQARSRALYDATPGQRDVHYGARPAQRFDWLRCGR CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEECCCCCCCCCCCCCCHHHHHHHHHCCC PDAPLFVFIHGGYWQHCAKEDFAYAAAGPLARGFDVVLAEYTLAPAASMTDIVGEIGALL CCCCEEEEEECCHHHHHHHHHCHHHHCCCHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHH DYLSIDPDGIGTAGRPIHLSGHSAGGHLTAVHRAHPAVVSALAISPLVDLEPISLCVLND HHHCCCCCCCCCCCCEEEECCCCCCCCEEEEHHHHHHHHHHHHHCCCCCCCCEEEEEECC RLQLTAHEIAAYSPLRHIGPGAPTVVAVGAAELPELVRHAHEYAHACEAAGERIARAWLP CHHHHHHHHHHHCCHHHCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC GMQHFTVLDDLATPDSAMLAALQAIAPR CCHHHHHHHHHCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA