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The map label for this gene is dgoT [H]

Identifier: 115351641

GI number: 115351641

Start: 1758446

End: 1759774

Strand: Direct

Name: dgoT [H]

Synonym: Bamb_1588

Alternate gene names: 115351641

Gene position: 1758446-1759774 (Clockwise)

Preceding gene: 115351640

Following gene: 115351642

Centisome position: 49.44

GC content: 71.48

Gene sequence:

>1329_bases
ATGCTGATTCATCACGTCGAGCCGTCGCTGCAGGAGGCGGCCACCACCGGCCGGCGCGCGCCGGCCTATGCCTGGCTCGT
GTTCGGGCTGACCGTCGGCCTGCTGCTGTCGGACTATATGTCGCGGCAGGTGCTCAACGCCGTGTTTCCGCTGCTCAAGC
ACGCGTGGGGACTGTCGGACACGCAGCTCGGCTCGCTGTCCGGCGTCGTCGCGCTGCTGGTCGGGCTGCTGACGTTTCCG
TTGTCGGTGCTCGCCGACCGCTTCGGGCGCGTGCGCAGCATCGTGCTGATGGCCGCGCTGTGGAGCGTCGCGACGCTCGG
CTGCGCGCTGTCCACCAATTACGCCGAGATGCTCGTCGCGCGCGGGCTCGTCGGGCTCGGTGAAGCCGCGTACGGCAGCG
TCGGCGTTGCACTGATCCTCAGCATCTTTCCGGCCCGCCTGCGCGCGACGCTGACTGGCGCGTTCATGGCCGGCGGCGCA
TTCGGCTCGGTGTTCGGGATGGCGCTAGGCGGGCTGGTCGGCGCGCATCTCGGCTGGCGCTGGTCGTTCGGGGTGATGGC
CGCGCTCGGCATCGTGCTGCTGATCGCGTATCGCTGCGTGGTGACCGAACGGCGGCTCGCGGCGTGCCGCGTCGAACCGT
GCCGGCCCCATCCCGATGCGCCGCGCGACCTGCGCGGCAGCGTGCGCGTGCTGATGTCGGGGCTGTTCGCGTCGCGTTCG
GTGATCTGCGCGTATGTCGGCAGCGGGCTGCACCTGTTCGTGCCCGGCGCGCTGTTCGCGTGGCTGCCGAGCTACCTGAA
CCGCTACTACGCGATGGCGCCCGACCGTGCCGCCGTGCTCGCGGCCGGCTTCGTGCTGCTGTCGGGCGTCGGGATGGTCG
GCTGCGGGATCATCACCGACCGCGTCGGGCGTGCCGACGGCGCACACAAATGGCTGACCGCGATCGCGTATTGCGTGCTG
ACGGGCGTGTGCCTCGCGATCGCGTTCCGGCTGCCGCCCGGTCCGCTGCAGCTCGCGCTGATCTGCGCGGGCATGCTGGT
CGGCGCGGGGGCGTCCGGCGCGTCGGGCGCGATGGTCGCGAACCTGACGCCAGCCGCGATCCATGCGTCGGCGTTCGCGA
CGCTCACGCTCGCCAACAACCTGCTCGGCATGGCGCCGGGCCCGCTGCTGACGGGGTGGGTCGCCGATCGCGCCGGTCTC
GTCGGCGCACTGCAATGGATTCCCGCCGTGCCGCTCGCGGCCGCCGTGCTGTTCGCGATCGGACGCGCGAGCTACTCGGC
CGATATCGCGCGCGTCGAACGCGAACGGCGCGCATCCCGTCTTTCCTGA

Upstream 100 bases:

>100_bases
CCCACCCCTGCGCACGGCGCGGGGGCTGACTCCGGTCAACGGAGCGGGGCCACGCAAGCCGCGCCGGAGCACGACAGCTC
CGGTGCCGGAGGAGACACGC

Downstream 100 bases:

>100_bases
ACCTTCCTGAACCGAACCCTCCCGGAGGCTGCATGACCCTCACGACCGCACCCACCATCCTGATCGTGCCCGGCTTGCGC
GATCACGTCGAAGACCACTG

Product: major facilitator transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 442; Mature: 442

Protein sequence:

>442_residues
MLIHHVEPSLQEAATTGRRAPAYAWLVFGLTVGLLLSDYMSRQVLNAVFPLLKHAWGLSDTQLGSLSGVVALLVGLLTFP
LSVLADRFGRVRSIVLMAALWSVATLGCALSTNYAEMLVARGLVGLGEAAYGSVGVALILSIFPARLRATLTGAFMAGGA
FGSVFGMALGGLVGAHLGWRWSFGVMAALGIVLLIAYRCVVTERRLAACRVEPCRPHPDAPRDLRGSVRVLMSGLFASRS
VICAYVGSGLHLFVPGALFAWLPSYLNRYYAMAPDRAAVLAAGFVLLSGVGMVGCGIITDRVGRADGAHKWLTAIAYCVL
TGVCLAIAFRLPPGPLQLALICAGMLVGAGASGASGAMVANLTPAAIHASAFATLTLANNLLGMAPGPLLTGWVADRAGL
VGALQWIPAVPLAAAVLFAIGRASYSADIARVERERRASRLS

Sequences:

>Translated_442_residues
MLIHHVEPSLQEAATTGRRAPAYAWLVFGLTVGLLLSDYMSRQVLNAVFPLLKHAWGLSDTQLGSLSGVVALLVGLLTFP
LSVLADRFGRVRSIVLMAALWSVATLGCALSTNYAEMLVARGLVGLGEAAYGSVGVALILSIFPARLRATLTGAFMAGGA
FGSVFGMALGGLVGAHLGWRWSFGVMAALGIVLLIAYRCVVTERRLAACRVEPCRPHPDAPRDLRGSVRVLMSGLFASRS
VICAYVGSGLHLFVPGALFAWLPSYLNRYYAMAPDRAAVLAAGFVLLSGVGMVGCGIITDRVGRADGAHKWLTAIAYCVL
TGVCLAIAFRLPPGPLQLALICAGMLVGAGASGASGAMVANLTPAAIHASAFATLTLANNLLGMAPGPLLTGWVADRAGL
VGALQWIPAVPLAAAVLFAIGRASYSADIARVERERRASRLS
>Mature_442_residues
MLIHHVEPSLQEAATTGRRAPAYAWLVFGLTVGLLLSDYMSRQVLNAVFPLLKHAWGLSDTQLGSLSGVVALLVGLLTFP
LSVLADRFGRVRSIVLMAALWSVATLGCALSTNYAEMLVARGLVGLGEAAYGSVGVALILSIFPARLRATLTGAFMAGGA
FGSVFGMALGGLVGAHLGWRWSFGVMAALGIVLLIAYRCVVTERRLAACRVEPCRPHPDAPRDLRGSVRVLMSGLFASRS
VICAYVGSGLHLFVPGALFAWLPSYLNRYYAMAPDRAAVLAAGFVLLSGVGMVGCGIITDRVGRADGAHKWLTAIAYCVL
TGVCLAIAFRLPPGPLQLALICAGMLVGAGASGASGAMVANLTPAAIHASAFATLTLANNLLGMAPGPLLTGWVADRAGL
VGALQWIPAVPLAAAVLFAIGRASYSADIARVERERRASRLS

Specific function: Intake of galactonate into the cell [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily. Phthalate permease family [H]

Homologues:

Organism=Homo sapiens, GI185136021, Length=236, Percent_Identity=26.271186440678, Blast_Score=66, Evalue=5e-11,
Organism=Homo sapiens, GI215490096, Length=472, Percent_Identity=24.1525423728814, Blast_Score=65, Evalue=9e-11,
Organism=Homo sapiens, GI14042968, Length=472, Percent_Identity=24.1525423728814, Blast_Score=65, Evalue=9e-11,
Organism=Escherichia coli, GI87082320, Length=415, Percent_Identity=24.3373493975904, Blast_Score=75, Evalue=1e-14,
Organism=Escherichia coli, GI2367379, Length=297, Percent_Identity=25.2525252525253, Blast_Score=72, Evalue=7e-14,
Organism=Caenorhabditis elegans, GI17539092, Length=398, Percent_Identity=24.6231155778894, Blast_Score=67, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17557872, Length=388, Percent_Identity=23.7113402061856, Blast_Score=66, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI193209775, Length=445, Percent_Identity=22.6966292134831, Blast_Score=65, Evalue=5e-11,
Organism=Drosophila melanogaster, GI24654039, Length=269, Percent_Identity=24.5353159851301, Blast_Score=74, Evalue=2e-13,
Organism=Drosophila melanogaster, GI17864456, Length=269, Percent_Identity=24.5353159851301, Blast_Score=74, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24654041, Length=259, Percent_Identity=24.7104247104247, Blast_Score=74, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24654037, Length=259, Percent_Identity=24.7104247104247, Blast_Score=74, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24654044, Length=259, Percent_Identity=24.7104247104247, Blast_Score=74, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004744
- InterPro:   IPR000849
- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 45992; Mature: 45992

Theoretical pI: Translated: 10.01; Mature: 10.01

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure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HHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]