Definition Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence.
Accession NC_008390
Length 3,556,545

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The map label for this gene is tauD [H]

Identifier: 115351639

GI number: 115351639

Start: 1756263

End: 1757111

Strand: Direct

Name: tauD [H]

Synonym: Bamb_1586

Alternate gene names: 115351639

Gene position: 1756263-1757111 (Clockwise)

Preceding gene: 115351638

Following gene: 115351640

Centisome position: 49.38

GC content: 67.73

Gene sequence:

>849_bases
ATGCGAGTCGAACCCCTGACCTGTGCGATCGGCGCGGAACTGCTGGACGTGAGCCTCGCCGACGCCGTGCACGACGACGG
CCTGTTCGCCGAGATCCGCGCGCAGTTGCTGCGCCATCGCGTGCTGTTCCTGCGCGACCAGGACATCACGCGTGCCGAGC
ATGTCGCGTTCGCGCGCCGCTTCGGCGAGCTCGAGGATCATCCGGTCGCCGGCAGCGACCCTGAGCATCCGGGGCTCGTG
CGGATCTACAAGTCGCCCGACCAGCCGAACGACCGCTACGAGAATGCGTGGCACAGCGATGCGAGCTGGCGCGTGGCGCC
GCCGTTCGGCTGTGTGCTGCGCTGCATCGACGGTCCGCCGGTTGGCGGCGACACGATGTGGGCGAACATGGTGCTCGCGT
ACGAGAACCTGCCGGACCACGTGAAGCAGCAGATCGCGGACCTGCGCGCCCGCCACAGCATCGAGGCGAGCTTCGGCGCG
GCGATGCCGATCGACAAGCGCCTCGCGTTGAAGGCGCAGTATCCGGACGCCGAGCATCCGGTCGTGCGCACGCATCCCGA
AACGGGCGAGAAGGTGCTGTACGTAAATGCGTTCACCACGCATTTCACCAACTTCCACACCCCCGCGCGCGTGCGCGTCG
GGCAGGACGCGAATCCTGGCGCCGGCCAGCTGCTGCACTACCTGATCAGCCAGGCGGCGATCCCCGAATACCAGGTGCGC
TGGCGCTGGAAAAAGAACAGCGTCGCGATCTGGGACAACCGCGCCACCCAGCATTACGCGGTGATGGACTACCCGCCGTG
CGTGCGCCGGATGGAGCGCGCGGGCATCGTTGGCGACGTGCCGTTCTGA

Upstream 100 bases:

>100_bases
AACCAGCGCTATGCGCTGCAGGACGCGGCGCAGGCGCACCGCGACCTCGAGTCGCGCAAGACGACCGGCTCGTCGGTATT
CATCGTCTGAGGAGACGCGC

Downstream 100 bases:

>100_bases
GCACGCGCGCACCGTAACCGATCCACGACCGATACAACGCGCCGGGTTCGCCGCCCGGCGCGACGGGATACGCACGCCCG
TACGCCCGAACACAACGATT

Product: taurine dioxygenase

Products: NA

Alternate protein names: 2-aminoethanesulfonate dioxygenase; Sulfate starvation-induced protein 3; SSI3 [H]

Number of amino acids: Translated: 282; Mature: 282

Protein sequence:

>282_residues
MRVEPLTCAIGAELLDVSLADAVHDDGLFAEIRAQLLRHRVLFLRDQDITRAEHVAFARRFGELEDHPVAGSDPEHPGLV
RIYKSPDQPNDRYENAWHSDASWRVAPPFGCVLRCIDGPPVGGDTMWANMVLAYENLPDHVKQQIADLRARHSIEASFGA
AMPIDKRLALKAQYPDAEHPVVRTHPETGEKVLYVNAFTTHFTNFHTPARVRVGQDANPGAGQLLHYLISQAAIPEYQVR
WRWKKNSVAIWDNRATQHYAVMDYPPCVRRMERAGIVGDVPF

Sequences:

>Translated_282_residues
MRVEPLTCAIGAELLDVSLADAVHDDGLFAEIRAQLLRHRVLFLRDQDITRAEHVAFARRFGELEDHPVAGSDPEHPGLV
RIYKSPDQPNDRYENAWHSDASWRVAPPFGCVLRCIDGPPVGGDTMWANMVLAYENLPDHVKQQIADLRARHSIEASFGA
AMPIDKRLALKAQYPDAEHPVVRTHPETGEKVLYVNAFTTHFTNFHTPARVRVGQDANPGAGQLLHYLISQAAIPEYQVR
WRWKKNSVAIWDNRATQHYAVMDYPPCVRRMERAGIVGDVPF
>Mature_282_residues
MRVEPLTCAIGAELLDVSLADAVHDDGLFAEIRAQLLRHRVLFLRDQDITRAEHVAFARRFGELEDHPVAGSDPEHPGLV
RIYKSPDQPNDRYENAWHSDASWRVAPPFGCVLRCIDGPPVGGDTMWANMVLAYENLPDHVKQQIADLRARHSIEASFGA
AMPIDKRLALKAQYPDAEHPVVRTHPETGEKVLYVNAFTTHFTNFHTPARVRVGQDANPGAGQLLHYLISQAAIPEYQVR
WRWKKNSVAIWDNRATQHYAVMDYPPCVRRMERAGIVGDVPF

Specific function: Catalyzes the conversion of taurine and alpha ketoglutarate to sulfite, aminoacetaldehyde and succinate. Required for the utilization of taurine (2-aminoethanesulfonic acid) as an alternative sulfur source. Pentane-sulfonic acid, 3- (N-morpholino)propanes

COG id: COG2175

COG function: function code Q; Probable taurine catabolism dioxygenase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tfdA dioxygenase family [H]

Homologues:

Organism=Escherichia coli, GI1786565, Length=289, Percent_Identity=37.7162629757785, Blast_Score=181, Evalue=7e-47,
Organism=Saccharomyces cerevisiae, GI6322971, Length=282, Percent_Identity=26.9503546099291, Blast_Score=104, Evalue=1e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003819 [H]

Pfam domain/function: PF02668 TauD [H]

EC number: =1.14.11.17 [H]

Molecular weight: Translated: 31837; Mature: 31837

Theoretical pI: Translated: 6.75; Mature: 6.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVEPLTCAIGAELLDVSLADAVHDDGLFAEIRAQLLRHRVLFLRDQDITRAEHVAFARR
CCCCCEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHH
FGELEDHPVAGSDPEHPGLVRIYKSPDQPNDRYENAWHSDASWRVAPPFGCVLRCIDGPP
HCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHCCCCCCCCCCEECCCHHHHEEECCCCC
VGGDTMWANMVLAYENLPDHVKQQIADLRARHSIEASFGAAMPIDKRLALKAQYPDAEHP
CCCCHHHHHEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCC
VVRTHPETGEKVLYVNAFTTHFTNFHTPARVRVGQDANPGAGQLLHYLISQAAIPEYQVR
EEEECCCCCCEEEEEEEHHHHCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHCCCCEEEE
WRWKKNSVAIWDNRATQHYAVMDYPPCVRRMERAGIVGDVPF
EEEECCCEEEEECCCCCEEEEECCCHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MRVEPLTCAIGAELLDVSLADAVHDDGLFAEIRAQLLRHRVLFLRDQDITRAEHVAFARR
CCCCCEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHH
FGELEDHPVAGSDPEHPGLVRIYKSPDQPNDRYENAWHSDASWRVAPPFGCVLRCIDGPP
HCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHCCCCCCCCCCEECCCHHHHEEECCCCC
VGGDTMWANMVLAYENLPDHVKQQIADLRARHSIEASFGAAMPIDKRLALKAQYPDAEHP
CCCCHHHHHEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCC
VVRTHPETGEKVLYVNAFTTHFTNFHTPARVRVGQDANPGAGQLLHYLISQAAIPEYQVR
EEEECCCCCCEEEEEEEHHHHCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHCCCCEEEE
WRWKKNSVAIWDNRATQHYAVMDYPPCVRRMERAGIVGDVPF
EEEECCCEEEEECCCCCEEEEECCCHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8808933; 9278503; 2656410; 8774726; 7984428; 9287300; 11955067 [H]