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The map label for this gene is cbiD

Identifier: 115351629

GI number: 115351629

Start: 1744280

End: 1745371

Strand: Direct

Name: cbiD

Synonym: Bamb_1576

Alternate gene names: 115351629

Gene position: 1744280-1745371 (Clockwise)

Preceding gene: 115351628

Following gene: 115351630

Centisome position: 49.04

GC content: 71.34

Gene sequence:

>1092_bases
GTGATGCGCGACGAAACCCCCGAACGACCGGCGCCGCTGCGGTTCGGCTATACGACCGGCAGCTGCGCGACCGCGACGTC
GCTCGCCGCCGCGCGACTGCTGCTCGCGGGCCACGCGGACGATGCGGTCGAAATCGTGTTGCCGAAGGGGCAGCGCGTGA
TGATGCGACTCGAGTTCTGCCGGACCACCGCCGACGGCGCCGAGGCCGGCACCGTCAAGGACGCCGGCGACGATCCGGAC
GTCACGCACGGTGCGCTGGTGTTCGCGCGCGTCGCGCTGTCCGCCGCGCCCGGCGTGCGTTTTCATGCGGGGCCGGGCGT
CGGCACGGTCACGCGCGCGGGGCTCACGCTGCCGGTCGGCGAACCGGCAATCAATCCGGTGCCGCGCCAGATGATGACCA
CGCACCTCGACGCGCTCGCGGCCGAATACGGTTACACAGGCGGCTTCGACGTGACGATCGGCGTGGAGGGCGGCGAGGCG
CTCGCACTGAAGACGATGAACCCGCGACTGGGCATCGTCGGCGGATTGTCGATCCTCGGCACGACCGGCATCGTGCGGCC
GTTCTCGTGCTCGGCGTACATTGCGTCGATCCACCAGGGCATCGACGTCGCGCGCGCGAACGGCATCGCGCACATCGCCG
CGTGCACCGGCAACACGAGCGAGGATGCGATGCGCGCGCACTACGGCCTGCCCGACATGGCGCTGATCGAAATGGGCGAT
TTCGCGGGCGCGGTGCTCAAGCATCTGCGCCGCGCGCCGGTCTCCCGCCTGTCGATGTGCGGCGGCTTCGGCAAGCTCAG
CAAGCTCGCGGCCGGCCATCTCGACCTGCACAGCCGCCATTCGAGCATCGACCTGCCGCTGCTCGCGCAGTGGGCGGCCG
AGGCCGGTGCGAGCGACGCGCTGCAGGCCGCGATGCGCGCGGCGAACACCAGCCAGGAAGCGCTGAAGCTCGCGCTCGCG
GACGGCGTGCCGCTCGGCGACCTCGTCTGTGCGCACGCGCTGCGGGTCGCGCGCGACATCGTGCCGGCCTCGGTGGCCGT
CGAGATGTTCGCGATCGACCGGCAGGGCCGTTTCGTCGGAACTGCGCGATGA

Upstream 100 bases:

>100_bases
AGCCGCTCGGCCGTTTCGACACGTGGCGGCAGCCGTTGCCGGTCACGCTGTACGACGGGCGCAAGCCCGATCCCGCGGCA
ACGGAATTCACGGGCCCCGC

Downstream 100 bases:

>100_bases
GCGTACGCATCCTGCTCCTCGGCGGCACCGGCGATGCGCTGACGATCGCGCGCACGCTCGGGCCCGGGCACGTCTATAGC
CTCGCAGGCCTCGGCAAGGT

Product: cobalt-precorrin-6A synthase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 363; Mature: 363

Protein sequence:

>363_residues
MMRDETPERPAPLRFGYTTGSCATATSLAAARLLLAGHADDAVEIVLPKGQRVMMRLEFCRTTADGAEAGTVKDAGDDPD
VTHGALVFARVALSAAPGVRFHAGPGVGTVTRAGLTLPVGEPAINPVPRQMMTTHLDALAAEYGYTGGFDVTIGVEGGEA
LALKTMNPRLGIVGGLSILGTTGIVRPFSCSAYIASIHQGIDVARANGIAHIAACTGNTSEDAMRAHYGLPDMALIEMGD
FAGAVLKHLRRAPVSRLSMCGGFGKLSKLAAGHLDLHSRHSSIDLPLLAQWAAEAGASDALQAAMRAANTSQEALKLALA
DGVPLGDLVCAHALRVARDIVPASVAVEMFAIDRQGRFVGTAR

Sequences:

>Translated_363_residues
MMRDETPERPAPLRFGYTTGSCATATSLAAARLLLAGHADDAVEIVLPKGQRVMMRLEFCRTTADGAEAGTVKDAGDDPD
VTHGALVFARVALSAAPGVRFHAGPGVGTVTRAGLTLPVGEPAINPVPRQMMTTHLDALAAEYGYTGGFDVTIGVEGGEA
LALKTMNPRLGIVGGLSILGTTGIVRPFSCSAYIASIHQGIDVARANGIAHIAACTGNTSEDAMRAHYGLPDMALIEMGD
FAGAVLKHLRRAPVSRLSMCGGFGKLSKLAAGHLDLHSRHSSIDLPLLAQWAAEAGASDALQAAMRAANTSQEALKLALA
DGVPLGDLVCAHALRVARDIVPASVAVEMFAIDRQGRFVGTAR
>Mature_363_residues
MMRDETPERPAPLRFGYTTGSCATATSLAAARLLLAGHADDAVEIVLPKGQRVMMRLEFCRTTADGAEAGTVKDAGDDPD
VTHGALVFARVALSAAPGVRFHAGPGVGTVTRAGLTLPVGEPAINPVPRQMMTTHLDALAAEYGYTGGFDVTIGVEGGEA
LALKTMNPRLGIVGGLSILGTTGIVRPFSCSAYIASIHQGIDVARANGIAHIAACTGNTSEDAMRAHYGLPDMALIEMGD
FAGAVLKHLRRAPVSRLSMCGGFGKLSKLAAGHLDLHSRHSSIDLPLLAQWAAEAGASDALQAAMRAANTSQEALKLALA
DGVPLGDLVCAHALRVARDIVPASVAVEMFAIDRQGRFVGTAR

Specific function: May catalyze the methylation of C-1 in cobalt-precorrin- 5 and the subsequent extrusion of acetic acid from the resulting intermediate to form cobalt-precorrin-6A [H]

COG id: COG1903

COG function: function code H; Cobalamin biosynthesis protein CbiD

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CbiD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002748 [H]

Pfam domain/function: PF01888 CbiD [H]

EC number: NA

Molecular weight: Translated: 37590; Mature: 37590

Theoretical pI: Translated: 6.95; Mature: 6.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMRDETPERPAPLRFGYTTGSCATATSLAAARLLLAGHADDAVEIVLPKGQRVMMRLEFC
CCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHH
RTTADGAEAGTVKDAGDDPDVTHGALVFARVALSAAPGVRFHAGPGVGTVTRAGLTLPVG
HCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEECCCCCCCHHHCCEEEECC
EPAINPVPRQMMTTHLDALAAEYGYTGGFDVTIGVEGGEALALKTMNPRLGIVGGLSILG
CCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCEEEEEECCCCEEEEECHHHHC
TTGIVRPFSCSAYIASIHQGIDVARANGIAHIAACTGNTSEDAMRAHYGLPDMALIEMGD
CCCCCCCCCHHHHHHHHHHCCHHHHCCCEEEEEEECCCCCHHHHHHHCCCCCHHEEEHHH
FAGAVLKHLRRAPVSRLSMCGGFGKLSKLAAGHLDLHSRHSSIDLPLLAQWAAEAGASDA
HHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHCCCHHHCCCCCCCCHHHHHHHHHCCCHHH
LQAAMRAANTSQEALKLALADGVPLGDLVCAHALRVARDIVPASVAVEMFAIDRQGRFVG
HHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHEEEEEEECCCCCEEE
TAR
CCC
>Mature Secondary Structure
MMRDETPERPAPLRFGYTTGSCATATSLAAARLLLAGHADDAVEIVLPKGQRVMMRLEFC
CCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHH
RTTADGAEAGTVKDAGDDPDVTHGALVFARVALSAAPGVRFHAGPGVGTVTRAGLTLPVG
HCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEECCCCCCCHHHCCEEEECC
EPAINPVPRQMMTTHLDALAAEYGYTGGFDVTIGVEGGEALALKTMNPRLGIVGGLSILG
CCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCEEEEEECCCCEEEEECHHHHC
TTGIVRPFSCSAYIASIHQGIDVARANGIAHIAACTGNTSEDAMRAHYGLPDMALIEMGD
CCCCCCCCCHHHHHHHHHHCCHHHHCCCEEEEEEECCCCCHHHHHHHCCCCCHHEEEHHH
FAGAVLKHLRRAPVSRLSMCGGFGKLSKLAAGHLDLHSRHSSIDLPLLAQWAAEAGASDA
HHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHCCCHHHCCCCCCCCHHHHHHHHHCCCHHH
LQAAMRAANTSQEALKLALADGVPLGDLVCAHALRVARDIVPASVAVEMFAIDRQGRFVG
HHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHEEEEEEECCCCCEEE
TAR
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA