Definition Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence.
Accession NC_008390
Length 3,556,545

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The map label for this gene is 115351615

Identifier: 115351615

GI number: 115351615

Start: 1730043

End: 1730369

Strand: Direct

Name: 115351615

Synonym: Bamb_1562

Alternate gene names: NA

Gene position: 1730043-1730369 (Clockwise)

Preceding gene: 115351614

Following gene: 115351618

Centisome position: 48.64

GC content: 66.67

Gene sequence:

>327_bases
ATGACGCGGGCGCTCTTCAACTGCAGCCGCAACCGGCTGCACAGCCCGACCGCCGAAGCCGTGTTCGCGGCATGGCCGGG
TGTCGAAACCGACTCCGCGGGGCTCGCGCCCGACGCCGACACGCAAGTGTGCGTCGAGCAGCTCGAATGGGCCGAGATCG
TGTTCGTAATGGAGCGCGCGCACAAGGCGAAGCTCACCGCCCGGTTCGGCGCCCGACTGAAGCACAAGAAGATCGTCTGC
CTCGACATTCCCGACCGCTACACGTACATGCAGCCCGAGCTGATCGCGCTGCTCGAACGCAAGGTCGGGCCGTTGCTGCG
CGCATGA

Upstream 100 bases:

>100_bases
CAAGGCCGACTACGTGCCGCACATGCTGGCGTACGTGCGCCCCGACACGATTCCGCAGGGTTGAACGGATGACCGGACGA
GCCGGTCGCGGCGCGCCGGC

Downstream 100 bases:

>100_bases
CCGGGGCGTGACCGGCGCGGGGCCGGTTCAGCGCAGACGAAGCGGGCCGTCAGCAAGCGGGGAAAAGCGGTCGAGGTGCA
GCAGCTCGATGATCTTGCGG

Product: low molecular weight phosphotyrosine protein phosphatase

Products: NA

Alternate protein names: Protein-Tyrosine Phosphatase Low Molecular Weight; Protein-Tyrosine-Phosphatase; Phosphatase; Phosphotyrosine Protein Phosphatase; Protein Tyrosine Phosphatase; Protein Tyrosine Phosphatase-Like Protein

Number of amino acids: Translated: 108; Mature: 107

Protein sequence:

>108_residues
MTRALFNCSRNRLHSPTAEAVFAAWPGVETDSAGLAPDADTQVCVEQLEWAEIVFVMERAHKAKLTARFGARLKHKKIVC
LDIPDRYTYMQPELIALLERKVGPLLRA

Sequences:

>Translated_108_residues
MTRALFNCSRNRLHSPTAEAVFAAWPGVETDSAGLAPDADTQVCVEQLEWAEIVFVMERAHKAKLTARFGARLKHKKIVC
LDIPDRYTYMQPELIALLERKVGPLLRA
>Mature_107_residues
TRALFNCSRNRLHSPTAEAVFAAWPGVETDSAGLAPDADTQVCVEQLEWAEIVFVMERAHKAKLTARFGARLKHKKIVCL
DIPDRYTYMQPELIALLERKVGPLLRA

Specific function: Unknown

COG id: COG4551

COG function: function code R; Predicted protein tyrosine phosphatase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12164; Mature: 12033

Theoretical pI: Translated: 8.50; Mature: 8.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRALFNCSRNRLHSPTAEAVFAAWPGVETDSAGLAPDADTQVCVEQLEWAEIVFVMERA
CCCCHHCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
HKAKLTARFGARLKHKKIVCLDIPDRYTYMQPELIALLERKVGPLLRA
HHHHHHHHHCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TRALFNCSRNRLHSPTAEAVFAAWPGVETDSAGLAPDADTQVCVEQLEWAEIVFVMERA
CCCHHCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
HKAKLTARFGARLKHKKIVCLDIPDRYTYMQPELIALLERKVGPLLRA
HHHHHHHHHCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA