| Definition | Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008390 |
| Length | 3,556,545 |
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The map label for this gene is fhuB [H]
Identifier: 115351586
GI number: 115351586
Start: 1683869
End: 1685962
Strand: Direct
Name: fhuB [H]
Synonym: Bamb_1533
Alternate gene names: 115351586
Gene position: 1683869-1685962 (Clockwise)
Preceding gene: 115351585
Following gene: 115351587
Centisome position: 47.35
GC content: 75.12
Gene sequence:
>2094_bases ATGACGACGGTCGCGGGGCGCCAGCGGCTCGCGGCGAGCGGGCAGCGCACGGTATCCGGCCGCCGCGCCGGTGCGATCGC GCTCGGCCTCGTCGTGCTGATCGCCGTGCTGGCGGTGCTGCGCGTCGCGCCGGACCTGCGCGTGTGGTGGAGCGCCGTGC CGGGCAGCGACGCCGCCGCGCTCGCGGGCGTGTTCCTGTTCGATCTCAACCTGCCGCGCGTCGCGGCCGCGCTCGTCGCG GGCGGCTGTCTCGGCATCGCGGGCGCGCTGTTCCAGTCGCTCACGCGCAATCCGCTCGCGTCGCCCGATCTGCTCGGCGT GACGGGCGGCGCGCAGCTCGGCCTGCTCGCGGCGATGCTGGTGCCGGCGCTCGCTGGTGTCGCATCGGTGCCGCTGCTGT TCGTCTGCGGGCTGATCGCGGCCGCGTGCGCGATCGTCGCGGCCGGCGGCTGGCGCGCGACGCCGTTGCGGCTCGTGCTC GCGGGCAGCGTGTGCATGCTGCTGTTCGCGGCGCTGTCGACGCTCGTGCTCGCGTTCTTCGAGCAGAACATCGCGGGCGC CGCGCTGTGGACCAACGGCAGTCTCTATCAACCGGGCGCGACCGGGCTCGCGCTCGCCGCGCGCTGGCTCGTCGTGCCGC TGCTTGCGCTGCCGTTCGTGATCCGGCCGCTGAATCCGCTCGCGCTCGGCGACGAGGCGGCGGCCACGGCCGGCGTGCGT GTCGATGCGACGCGACTCGCCGCGACGATCGTCGCGGTCGCGTTCACGAGCGTCGCGGTCAGCATCGCGGGCCCGCTGTC GTATGTCGGGCTCGTCGCGCCGAACCTGCTGCGCCAGGTGCGCGGGGCCCGCGCGGCGCGGCTCGGCGTGCTGGTGCCGC TGTCGGCGCTCGCGGGCGGTGCGCTCGTGCTGGTGACCGACAGCGCGGTGCTCGGGTCGGGCCTCGACGCGACGCTGTCG ACGGGTGTCGCGATCGCACTCGTCGGCACGCCGCTGATGCTCGCGATGATCCGGCGCGGCGCCGCGTGGTCGGGCGTGCT GCATGCGCAAGCCGAACGCGCGGCCGGCAGCGGCTCGACGCGCGTGGTCGGCTGGCTCGAAGGGCTCGGCTGGCCGTTGC GCACCGTGCTGTTCGTCGCGGCCGGCGTGCTCGCGGTGTTCGTCGGCGTATCGGCCGGCCCCGAATGGTTGTCGCCCGCG CGCTGGTTGGCCGCGCTGTCGGGCCACGATGCGCTCGCGCGGATGCTGATCGACCTGCGCATGCCGCGGCTGCTGTGCGC GCTCCTCGCGGGCGCGCTGCTGGCCGTGAGCGGCGTCGCGATGCAGAGCGTCGTGCGCAACCCGCTCGCCGGCCCCGAAG TGCTCGGCGTCACGCAGGGCGCGGGGCTCGTCACGCTGTTCGCATTGTCGACGTGGCCGCTGATGGGCCACGTGACGCTT GCCGCGGCCGCGTTGACCGGCGGTGCGCTGTCGCTCGCGATCACGCTCGCGCTGAATCATCGGCATCGTTACGCACCGCT CGCGGTCGCGCTGACCGGCATCGCGATCGGCGCGCTATGGACCACGCTCGCGCAATGGCTGATCACGCAGGAAAGCGTGC AGCCCGCGCGCTTCGTCGTCTGGCTCGTCGGCGGCACGTACGGCCGCAGCTGGGGCGAGGTGACGATGCTGCTGCCGTGG TGCGTGCTCGCGGTCCCCGTATTCGCGTGGCTCGCGCGGCCGCTCGACATGCTCGCGCTCGGCGACGACCAGGCCGCCGC GCTCGGGCTGCCGGTCGCCGCGTTGCGGCCGCTCGCGCTGACGATCGCGACGCTCGCGGCCTGCGCGGCCGTCGCGGCCG TCGGGCCGGTCGGCTTCATCGGGCTGATGGCGCCGCACGTCGCGTCGATGCTCGGCGCACGCCGGCATCGCACACGGCTG TGGCTCGCGGCCGCGTGCGGCGCGCTGATCCTCGGCCTCGCCGATCTGGCGGCACGCACGGTCGTCGCGCCGCGCGAAGT GCCGGCCGGCGTGCTGACCGCGCTGATCGGCGCGCCGTATCTGCTCGGGCTGCTGATCGTCGAGGGGCGCCGCGCCCGGC GCACGGGGCGATGA
Upstream 100 bases:
>100_bases ATCCGCAGACGGGCGCGCCGATGTGCGTGCCGGCCTACGGGCCGCCGGCATCCGGCACGCCGCACGCGTTCGAGCACGCG GTCGACCGGGATATCGCCGT
Downstream 100 bases:
>100_bases CGCCCGCGCTCGACGGTGCATGCGCCACGCGCTTTTCCGCGTTCGCGCCGGAACCGTTCGCCGAGCATCTCGATGTCGTA TGGCTCGGGATGCCCGACGA
Product: iron-hydroxamate transporter permease subunit
Products: ADP; phosphate; iron (III) hydroxamate [Cytoplasm] [C]
Alternate protein names: Ferric hydroxamate uptake protein B; Ferrichrome transport system permease protein fhuB; Ferrichrome uptake protein fhuB; Iron(III)-hydroxamate import system permease protein fhuB [H]
Number of amino acids: Translated: 697; Mature: 696
Protein sequence:
>697_residues MTTVAGRQRLAASGQRTVSGRRAGAIALGLVVLIAVLAVLRVAPDLRVWWSAVPGSDAAALAGVFLFDLNLPRVAAALVA GGCLGIAGALFQSLTRNPLASPDLLGVTGGAQLGLLAAMLVPALAGVASVPLLFVCGLIAAACAIVAAGGWRATPLRLVL AGSVCMLLFAALSTLVLAFFEQNIAGAALWTNGSLYQPGATGLALAARWLVVPLLALPFVIRPLNPLALGDEAAATAGVR VDATRLAATIVAVAFTSVAVSIAGPLSYVGLVAPNLLRQVRGARAARLGVLVPLSALAGGALVLVTDSAVLGSGLDATLS TGVAIALVGTPLMLAMIRRGAAWSGVLHAQAERAAGSGSTRVVGWLEGLGWPLRTVLFVAAGVLAVFVGVSAGPEWLSPA RWLAALSGHDALARMLIDLRMPRLLCALLAGALLAVSGVAMQSVVRNPLAGPEVLGVTQGAGLVTLFALSTWPLMGHVTL AAAALTGGALSLAITLALNHRHRYAPLAVALTGIAIGALWTTLAQWLITQESVQPARFVVWLVGGTYGRSWGEVTMLLPW CVLAVPVFAWLARPLDMLALGDDQAAALGLPVAALRPLALTIATLAACAAVAAVGPVGFIGLMAPHVASMLGARRHRTRL WLAAACGALILGLADLAARTVVAPREVPAGVLTALIGAPYLLGLLIVEGRRARRTGR
Sequences:
>Translated_697_residues MTTVAGRQRLAASGQRTVSGRRAGAIALGLVVLIAVLAVLRVAPDLRVWWSAVPGSDAAALAGVFLFDLNLPRVAAALVA GGCLGIAGALFQSLTRNPLASPDLLGVTGGAQLGLLAAMLVPALAGVASVPLLFVCGLIAAACAIVAAGGWRATPLRLVL AGSVCMLLFAALSTLVLAFFEQNIAGAALWTNGSLYQPGATGLALAARWLVVPLLALPFVIRPLNPLALGDEAAATAGVR VDATRLAATIVAVAFTSVAVSIAGPLSYVGLVAPNLLRQVRGARAARLGVLVPLSALAGGALVLVTDSAVLGSGLDATLS TGVAIALVGTPLMLAMIRRGAAWSGVLHAQAERAAGSGSTRVVGWLEGLGWPLRTVLFVAAGVLAVFVGVSAGPEWLSPA RWLAALSGHDALARMLIDLRMPRLLCALLAGALLAVSGVAMQSVVRNPLAGPEVLGVTQGAGLVTLFALSTWPLMGHVTL AAAALTGGALSLAITLALNHRHRYAPLAVALTGIAIGALWTTLAQWLITQESVQPARFVVWLVGGTYGRSWGEVTMLLPW CVLAVPVFAWLARPLDMLALGDDQAAALGLPVAALRPLALTIATLAACAAVAAVGPVGFIGLMAPHVASMLGARRHRTRL WLAAACGALILGLADLAARTVVAPREVPAGVLTALIGAPYLLGLLIVEGRRARRTGR >Mature_696_residues TTVAGRQRLAASGQRTVSGRRAGAIALGLVVLIAVLAVLRVAPDLRVWWSAVPGSDAAALAGVFLFDLNLPRVAAALVAG GCLGIAGALFQSLTRNPLASPDLLGVTGGAQLGLLAAMLVPALAGVASVPLLFVCGLIAAACAIVAAGGWRATPLRLVLA GSVCMLLFAALSTLVLAFFEQNIAGAALWTNGSLYQPGATGLALAARWLVVPLLALPFVIRPLNPLALGDEAAATAGVRV DATRLAATIVAVAFTSVAVSIAGPLSYVGLVAPNLLRQVRGARAARLGVLVPLSALAGGALVLVTDSAVLGSGLDATLST GVAIALVGTPLMLAMIRRGAAWSGVLHAQAERAAGSGSTRVVGWLEGLGWPLRTVLFVAAGVLAVFVGVSAGPEWLSPAR WLAALSGHDALARMLIDLRMPRLLCALLAGALLAVSGVAMQSVVRNPLAGPEVLGVTQGAGLVTLFALSTWPLMGHVTLA AAALTGGALSLAITLALNHRHRYAPLAVALTGIAIGALWTTLAQWLITQESVQPARFVVWLVGGTYGRSWGEVTMLLPWC VLAVPVFAWLARPLDMLALGDDQAAALGLPVAALRPLALTIATLAACAAVAAVGPVGFIGLMAPHVASMLGARRHRTRLW LAAACGALILGLADLAARTVVAPREVPAGVLTALIGAPYLLGLLIVEGRRARRTGR
Specific function: Part of the ABC transporter complex fhuCDB involved in iron(3+)-hydroxamate import. Responsible for the translocation of the substrate across the membrane [H]
COG id: COG0609
COG function: function code P; ABC-type Fe3+-siderophore transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily [H]
Homologues:
Organism=Escherichia coli, GI1786347, Length=632, Percent_Identity=32.2784810126582, Blast_Score=191, Evalue=9e-50, Organism=Escherichia coli, GI1790740, Length=292, Percent_Identity=40.7534246575342, Blast_Score=171, Evalue=1e-43, Organism=Escherichia coli, GI1788004, Length=309, Percent_Identity=36.2459546925566, Blast_Score=125, Evalue=9e-30, Organism=Escherichia coli, GI1786804, Length=322, Percent_Identity=34.7826086956522, Blast_Score=114, Evalue=2e-26, Organism=Escherichia coli, GI1790741, Length=266, Percent_Identity=36.8421052631579, Blast_Score=105, Evalue=1e-23, Organism=Escherichia coli, GI1786805, Length=311, Percent_Identity=32.7974276527331, Blast_Score=94, Evalue=2e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000522 - InterPro: IPR006311 [H]
Pfam domain/function: PF01032 FecCD [H]
EC number: NA
Molecular weight: Translated: 70742; Mature: 70611
Theoretical pI: Translated: 11.83; Mature: 11.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTVAGRQRLAASGQRTVSGRRAGAIALGLVVLIAVLAVLRVAPDLRVWWSAVPGSDAAA CCCCCCHHHHHHCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHEECCCCCCHHH LAGVFLFDLNLPRVAAALVAGGCLGIAGALFQSLTRNPLASPDLLGVTGGAQLGLLAAML HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCHHHHHHHHHH VPALAGVASVPLLFVCGLIAAACAIVAAGGWRATPLRLVLAGSVCMLLFAALSTLVLAFF HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH EQNIAGAALWTNGSLYQPGATGLALAARWLVVPLLALPFVIRPLNPLALGDEAAATAGVR HHCCCCEEEECCCCEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCE VDATRLAATIVAVAFTSVAVSIAGPLSYVGLVAPNLLRQVRGARAARLGVLVPLSALAGG EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCC ALVLVTDSAVLGSGLDATLSTGVAIALVGTPLMLAMIRRGAAWSGVLHAQAERAAGSGST EEEEEECCHHHCCCCCHHHHCCEEEEHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCC RVVGWLEGLGWPLRTVLFVAAGVLAVFVGVSAGPEWLSPARWLAALSGHDALARMLIDLR EEEEHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHCCHHHHHHHHCCHHHHHHHHHHHH MPRLLCALLAGALLAVSGVAMQSVVRNPLAGPEVLGVTQGAGLVTLFALSTWPLMGHVTL HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHCCHHHHHHH AAAALTGGALSLAITLALNHRHRYAPLAVALTGIAIGALWTTLAQWLITQESVQPARFVV HHHHHCCCHHHHEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEE WLVGGTYGRSWGEVTMLLPWCVLAVPVFAWLARPLDMLALGDDQAAALGLPVAALRPLAL EEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHEEECCCCHHHHCCCHHHHHHHHH TIATLAACAAVAAVGPVGFIGLMAPHVASMLGARRHRTRLWLAAACGALILGLADLAART HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VVAPREVPAGVLTALIGAPYLLGLLIVEGRRARRTGR HCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHCCCCC >Mature Secondary Structure TTVAGRQRLAASGQRTVSGRRAGAIALGLVVLIAVLAVLRVAPDLRVWWSAVPGSDAAA CCCCCHHHHHHCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHEECCCCCCHHH LAGVFLFDLNLPRVAAALVAGGCLGIAGALFQSLTRNPLASPDLLGVTGGAQLGLLAAML HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCHHHHHHHHHH VPALAGVASVPLLFVCGLIAAACAIVAAGGWRATPLRLVLAGSVCMLLFAALSTLVLAFF HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH EQNIAGAALWTNGSLYQPGATGLALAARWLVVPLLALPFVIRPLNPLALGDEAAATAGVR HHCCCCEEEECCCCEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCE VDATRLAATIVAVAFTSVAVSIAGPLSYVGLVAPNLLRQVRGARAARLGVLVPLSALAGG EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCC ALVLVTDSAVLGSGLDATLSTGVAIALVGTPLMLAMIRRGAAWSGVLHAQAERAAGSGST EEEEEECCHHHCCCCCHHHHCCEEEEHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCC RVVGWLEGLGWPLRTVLFVAAGVLAVFVGVSAGPEWLSPARWLAALSGHDALARMLIDLR EEEEHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHCCHHHHHHHHCCHHHHHHHHHHHH MPRLLCALLAGALLAVSGVAMQSVVRNPLAGPEVLGVTQGAGLVTLFALSTWPLMGHVTL HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHCCHHHHHHH AAAALTGGALSLAITLALNHRHRYAPLAVALTGIAIGALWTTLAQWLITQESVQPARFVV HHHHHCCCHHHHEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEE WLVGGTYGRSWGEVTMLLPWCVLAVPVFAWLARPLDMLALGDDQAAALGLPVAALRPLAL EEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHEEECCCCHHHHCCCHHHHHHHHH TIATLAACAAVAAVGPVGFIGLMAPHVASMLGARRHRTRLWLAAACGALILGLADLAART HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VVAPREVPAGVLTALIGAPYLLGLLIVEGRRARRTGR HCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; iron (III) hydroxamate [Periplasm]; H2O [C]
Specific reaction: ATP + iron (III) hydroxamate [Periplasm] + H2O = ADP + phosphate + iron (III) hydroxamate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11677609; 10103258 [H]