| Definition | Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008390 |
| Length | 3,556,545 |
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The map label for this gene is fhuF [H]
Identifier: 115351587
GI number: 115351587
Start: 1685959
End: 1686759
Strand: Direct
Name: fhuF [H]
Synonym: Bamb_1534
Alternate gene names: 115351587
Gene position: 1685959-1686759 (Clockwise)
Preceding gene: 115351586
Following gene: 115351588
Centisome position: 47.4
GC content: 71.04
Gene sequence:
>801_bases ATGACGCCCGCGCTCGACGGTGCATGCGCCACGCGCTTTTCCGCGTTCGCGCCGGAACCGTTCGCCGAGCATCTCGATGT CGTATGGCTCGGGATGCCCGACGACACGCACGCGCCGGGCCGGATCGTCGTGCCCGTGAGCGCGCTGCCCGAGCATCGCG ACGCGGTGCTCGACGCGATGGTGCGCCATTACGGCGGCGATCCGGCGCAGCATGCGCGCGCGCTGATGTCGCAATGGAGC AAGTACTACTTCGGCCGCGCGGCGCCCGCCGGCGTGGTGGCCGCGCTGACACTCGGCCGGCCGCTCGACATGGCGCCGGA ACGCACGTTCGTCGCGCTCGACGACGGGATGCCGGCCGCGCTGTATTTCGCGCCGGACGCGCTCGGCGCGCCGTGCAGCG AGCCCGCGTCGCGCTATGCGGGGCTCGTCGCGCATCTCGGCGCGGTGATCGACCTGCTCGCGGCAATGGGCCGCGTCACG CCGCGCGTGCTGTGGAGCAACGCGGGCAACCTGCTCGACTATCTGCTCGACACGTACCGGTCGCTGCCGTGCGCGGCCGA TCCCGTTCGCGATGCGGACTGGCTGTTCGGCGCGTCCTGCGTGCGCGGCGAGCCGAATCCGCTGCGCCTGCCGGTACGCG ATGCAGTACCGCGCTCGGCACTGCTGCCGACGCCATTTCGCGCGCGCCGCGTGTGCTGCCTGCGCTATGAAATTCCTGGA GAAACGCAACTGTGTGGAAGCTGCCCCCTGCTATTGACGATGGACGATGCGGCGCTGGCCGGGCAGGACGCGATCCGGTG A
Upstream 100 bases:
>100_bases CGCGCGAAGTGCCGGCCGGCGTGCTGACCGCGCTGATCGGCGCGCCGTATCTGCTCGGGCTGCTGATCGTCGAGGGGCGC CGCGCCCGGCGCACGGGGCG
Downstream 100 bases:
>100_bases CGCGGGCCGGCCGCCGCCATGCGTTGGGCGCACTGGCCGCGCTCGGCGCCGCGTGCTGCGGCGCGCTGGTTGCACCGGCC GTCGTATTCGCTGACGACGC
Product: ferric iron reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 266; Mature: 265
Protein sequence:
>266_residues MTPALDGACATRFSAFAPEPFAEHLDVVWLGMPDDTHAPGRIVVPVSALPEHRDAVLDAMVRHYGGDPAQHARALMSQWS KYYFGRAAPAGVVAALTLGRPLDMAPERTFVALDDGMPAALYFAPDALGAPCSEPASRYAGLVAHLGAVIDLLAAMGRVT PRVLWSNAGNLLDYLLDTYRSLPCAADPVRDADWLFGASCVRGEPNPLRLPVRDAVPRSALLPTPFRARRVCCLRYEIPG ETQLCGSCPLLLTMDDAALAGQDAIR
Sequences:
>Translated_266_residues MTPALDGACATRFSAFAPEPFAEHLDVVWLGMPDDTHAPGRIVVPVSALPEHRDAVLDAMVRHYGGDPAQHARALMSQWS KYYFGRAAPAGVVAALTLGRPLDMAPERTFVALDDGMPAALYFAPDALGAPCSEPASRYAGLVAHLGAVIDLLAAMGRVT PRVLWSNAGNLLDYLLDTYRSLPCAADPVRDADWLFGASCVRGEPNPLRLPVRDAVPRSALLPTPFRARRVCCLRYEIPG ETQLCGSCPLLLTMDDAALAGQDAIR >Mature_265_residues TPALDGACATRFSAFAPEPFAEHLDVVWLGMPDDTHAPGRIVVPVSALPEHRDAVLDAMVRHYGGDPAQHARALMSQWSK YYFGRAAPAGVVAALTLGRPLDMAPERTFVALDDGMPAALYFAPDALGAPCSEPASRYAGLVAHLGAVIDLLAAMGRVTP RVLWSNAGNLLDYLLDTYRSLPCAADPVRDADWLFGASCVRGEPNPLRLPVRDAVPRSALLPTPFRARRVCCLRYEIPGE TQLCGSCPLLLTMDDAALAGQDAIR
Specific function: Involved in the reduction of ferric iron in cytoplasmic ferrioxamine B [H]
COG id: COG4114
COG function: function code R; Uncharacterized Fe-S protein
Gene ontology:
Cell location: Cytoplasm. Cell membrane; Peripheral membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1790829, Length=184, Percent_Identity=30.9782608695652, Blast_Score=81, Evalue=7e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008090 - InterPro: IPR022770 [H]
Pfam domain/function: PF06276 FhuF [H]
EC number: NA
Molecular weight: Translated: 28517; Mature: 28386
Theoretical pI: Translated: 5.59; Mature: 5.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPALDGACATRFSAFAPEPFAEHLDVVWLGMPDDTHAPGRIVVPVSALPEHRDAVLDAM CCCCCCCHHHHHHHHCCCCHHHHCCCEEEEECCCCCCCCCEEEEECCCCCCHHHHHHHHH VRHYGGDPAQHARALMSQWSKYYFGRAAPAGVVAALTLGRPLDMAPERTFVALDDGMPAA HHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCEEEEECCCCCEE LYFAPDALGAPCSEPASRYAGLVAHLGAVIDLLAAMGRVTPRVLWSNAGNLLDYLLDTYR EEECCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHH SLPCAADPVRDADWLFGASCVRGEPNPLRLPVRDAVPRSALLPTPFRARRVCCLRYEIPG CCCCCCCCCCCCHHHHCCHHHCCCCCCEEECHHHCCCCCCCCCCCHHHHEEEEEEEECCC ETQLCGSCPLLLTMDDAALAGQDAIR CCCCCCCCCEEEEECCHHHCCCCCCC >Mature Secondary Structure TPALDGACATRFSAFAPEPFAEHLDVVWLGMPDDTHAPGRIVVPVSALPEHRDAVLDAM CCCCCCHHHHHHHHCCCCHHHHCCCEEEEECCCCCCCCCEEEEECCCCCCHHHHHHHHH VRHYGGDPAQHARALMSQWSKYYFGRAAPAGVVAALTLGRPLDMAPERTFVALDDGMPAA HHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCEEEEECCCCCEE LYFAPDALGAPCSEPASRYAGLVAHLGAVIDLLAAMGRVTPRVLWSNAGNLLDYLLDTYR EEECCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHH SLPCAADPVRDADWLFGASCVRGEPNPLRLPVRDAVPRSALLPTPFRARRVCCLRYEIPG CCCCCCCCCCCCHHHHCCHHHCCCCCCEEECHHHCCCCCCCCCCCHHHHEEEEEEEECCC ETQLCGSCPLLLTMDDAALAGQDAIR CCCCCCCCCEEEEECCHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7610040; 9278503; 9990318 [H]