The gene/protein map for NC_002758 is currently unavailable.
Definition Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence.
Accession NC_008390
Length 3,556,545

Click here to switch to the map view.

The map label for this gene is 115351531

Identifier: 115351531

GI number: 115351531

Start: 1623939

End: 1624412

Strand: Direct

Name: 115351531

Synonym: Bamb_1478

Alternate gene names: NA

Gene position: 1623939-1624412 (Clockwise)

Preceding gene: 115351530

Following gene: 115351533

Centisome position: 45.66

GC content: 66.88

Gene sequence:

>474_bases
ATGGCCACGTCCGTCAACCCGATCCCGGAAGGAATGCGCACGCTGACGCCGCATCTGATCTGCGCCCGCGCAGCCGCAGC
CATCGATTTCTACAAGCGTGCGTTCAACGCGACCGAGCGGTTTCGCCTGCCGACCCCGGACGGCCGGCTCGCGCACGCGT
GCCTCGCAATCGGCGATTCGACGCTGATGCTCGTGGATGAAATGCCGGAGCATGGCGCACTCGGACCGAAGGCGCTGAAA
GGCACGTCGGTCTGCTTGCACCTGTACGTGCCGGACACTGACGCTGCGATCGCGCAGGCCGTCGAGGCCGGCGCAACGGT
CAAGATGCCGGCCGCCGACATGTTCTGGGGCGATCGCTATGGGCAAGTGGAGGATCCGTTCGGCCATCGCTGGTCGATCG
CGACCCATCAGCGCGATCTGACGCCCGAGCAGATCGCGGAAGCGATGGCGAGCGCGCCGCCGTGTGGGAGCTGA

Upstream 100 bases:

>100_bases
GTCGATTTCCGTCGAGCCCGTCCGTCGTAGCGTTGGAGGCGTGCGCATCGTGCGTGCGTCCCGATTTCCGACACGACAAC
CGACTGAAGGAGCGACACCC

Downstream 100 bases:

>100_bases
GCGAAGCGGCGGCGGGCTGAGCGCGGCTCGCGGCTGCGGTTGCGGTTACGCCTGCGGTTGCGGTGGCGCGGGTCGTCGCG
TATCGGCGCGTATCGGCGCG

Product: glyoxalase/bleomycin resistance protein/dioxygenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 157; Mature: 156

Protein sequence:

>157_residues
MATSVNPIPEGMRTLTPHLICARAAAAIDFYKRAFNATERFRLPTPDGRLAHACLAIGDSTLMLVDEMPEHGALGPKALK
GTSVCLHLYVPDTDAAIAQAVEAGATVKMPAADMFWGDRYGQVEDPFGHRWSIATHQRDLTPEQIAEAMASAPPCGS

Sequences:

>Translated_157_residues
MATSVNPIPEGMRTLTPHLICARAAAAIDFYKRAFNATERFRLPTPDGRLAHACLAIGDSTLMLVDEMPEHGALGPKALK
GTSVCLHLYVPDTDAAIAQAVEAGATVKMPAADMFWGDRYGQVEDPFGHRWSIATHQRDLTPEQIAEAMASAPPCGS
>Mature_156_residues
ATSVNPIPEGMRTLTPHLICARAAAAIDFYKRAFNATERFRLPTPDGRLAHACLAIGDSTLMLVDEMPEHGALGPKALKG
TSVCLHLYVPDTDAAIAQAVEAGATVKMPAADMFWGDRYGQVEDPFGHRWSIATHQRDLTPEQIAEAMASAPPCGS

Specific function: Unknown

COG id: COG2764

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004360 [H]

Pfam domain/function: PF00903 Glyoxalase [H]

EC number: NA

Molecular weight: Translated: 16829; Mature: 16698

Theoretical pI: Translated: 5.90; Mature: 5.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
7.0 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATSVNPIPEGMRTLTPHLICARAAAAIDFYKRAFNATERFRLPTPDGRLAHACLAIGDS
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEECCCCCCHHHHHHHHHCCC
TLMLVDEMPEHGALGPKALKGTSVCLHLYVPDTDAAIAQAVEAGATVKMPAADMFWGDRY
EEEEEECCCCCCCCCCCCCCCCEEEEEEEECCCHHHHHHHHHCCCEEECCCHHHCCCCCC
GQVEDPFGHRWSIATHQRDLTPEQIAEAMASAPPCGS
CCCCCCCCCEEEEECCCCCCCHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
ATSVNPIPEGMRTLTPHLICARAAAAIDFYKRAFNATERFRLPTPDGRLAHACLAIGDS
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEECCCCCCHHHHHHHHHCCC
TLMLVDEMPEHGALGPKALKGTSVCLHLYVPDTDAAIAQAVEAGATVKMPAADMFWGDRY
EEEEEECCCCCCCCCCCCCCCCEEEEEEEECCCHHHHHHHHHCCCEEECCCHHHCCCCCC
GQVEDPFGHRWSIATHQRDLTPEQIAEAMASAPPCGS
CCCCCCCCCEEEEECCCCCCCHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]