| Definition | Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008390 |
| Length | 3,556,545 |
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The map label for this gene is 115351533
Identifier: 115351533
GI number: 115351533
Start: 1625017
End: 1625298
Strand: Direct
Name: 115351533
Synonym: Bamb_1480
Alternate gene names: NA
Gene position: 1625017-1625298 (Clockwise)
Preceding gene: 115351531
Following gene: 115351536
Centisome position: 45.69
GC content: 59.57
Gene sequence:
>282_bases ATGCCTCAAGCTGTCCGGTGCAATGCCGTAAATAGAGCGAGTCAATCGTTCATCTATCGCACCATGGTCCGAATTCTGTA CGCGGGTTATCTCGCGCTGGCGCTGTACCTGATTTATCCGATGGTGCAGAACACGCTGACCTTCAGCTCGGACTGCGTAC TGCGCGCGCTGCCGGGCGGCAATCGCGATCTGCCGAAGTTTTCGTCAAGCGACGCGCATGCACGGGCGAGCCGGTGTGTC GCGACCGCGCAAGTCGCGGAGCGATCGCCCAACATTCACTGA
Upstream 100 bases:
>100_bases TTGCGCGCGTCCTGGATCACCGTCTTGTCGTTCGCGAGCAGCGCATGCGCACAGAGCGATGCAGACGCTTCACGCATGCA CGAGATGAATTTGTGTTTGT
Downstream 100 bases:
>100_bases TTTCATCGATGCCGCTGCTAGCGGTGCGGTCACGCTGCGTGTGCTGGCCATTCGGCCAGGTTGATCGGCGCGTCGTGCGC AGCGATCATTGACGACATCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 93; Mature: 92
Protein sequence:
>93_residues MPQAVRCNAVNRASQSFIYRTMVRILYAGYLALALYLIYPMVQNTLTFSSDCVLRALPGGNRDLPKFSSSDAHARASRCV ATAQVAERSPNIH
Sequences:
>Translated_93_residues MPQAVRCNAVNRASQSFIYRTMVRILYAGYLALALYLIYPMVQNTLTFSSDCVLRALPGGNRDLPKFSSSDAHARASRCV ATAQVAERSPNIH >Mature_92_residues PQAVRCNAVNRASQSFIYRTMVRILYAGYLALALYLIYPMVQNTLTFSSDCVLRALPGGNRDLPKFSSSDAHARASRCVA TAQVAERSPNIH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10278; Mature: 10147
Theoretical pI: Translated: 9.93; Mature: 9.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 3.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPQAVRCNAVNRASQSFIYRTMVRILYAGYLALALYLIYPMVQNTLTFSSDCVLRALPGG CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCC NRDLPKFSSSDAHARASRCVATAQVAERSPNIH CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure PQAVRCNAVNRASQSFIYRTMVRILYAGYLALALYLIYPMVQNTLTFSSDCVLRALPGG CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCC NRDLPKFSSSDAHARASRCVATAQVAERSPNIH CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA