Definition Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence.
Accession NC_008390
Length 3,556,545

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The map label for this gene is 115351533

Identifier: 115351533

GI number: 115351533

Start: 1625017

End: 1625298

Strand: Direct

Name: 115351533

Synonym: Bamb_1480

Alternate gene names: NA

Gene position: 1625017-1625298 (Clockwise)

Preceding gene: 115351531

Following gene: 115351536

Centisome position: 45.69

GC content: 59.57

Gene sequence:

>282_bases
ATGCCTCAAGCTGTCCGGTGCAATGCCGTAAATAGAGCGAGTCAATCGTTCATCTATCGCACCATGGTCCGAATTCTGTA
CGCGGGTTATCTCGCGCTGGCGCTGTACCTGATTTATCCGATGGTGCAGAACACGCTGACCTTCAGCTCGGACTGCGTAC
TGCGCGCGCTGCCGGGCGGCAATCGCGATCTGCCGAAGTTTTCGTCAAGCGACGCGCATGCACGGGCGAGCCGGTGTGTC
GCGACCGCGCAAGTCGCGGAGCGATCGCCCAACATTCACTGA

Upstream 100 bases:

>100_bases
TTGCGCGCGTCCTGGATCACCGTCTTGTCGTTCGCGAGCAGCGCATGCGCACAGAGCGATGCAGACGCTTCACGCATGCA
CGAGATGAATTTGTGTTTGT

Downstream 100 bases:

>100_bases
TTTCATCGATGCCGCTGCTAGCGGTGCGGTCACGCTGCGTGTGCTGGCCATTCGGCCAGGTTGATCGGCGCGTCGTGCGC
AGCGATCATTGACGACATCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 93; Mature: 92

Protein sequence:

>93_residues
MPQAVRCNAVNRASQSFIYRTMVRILYAGYLALALYLIYPMVQNTLTFSSDCVLRALPGGNRDLPKFSSSDAHARASRCV
ATAQVAERSPNIH

Sequences:

>Translated_93_residues
MPQAVRCNAVNRASQSFIYRTMVRILYAGYLALALYLIYPMVQNTLTFSSDCVLRALPGGNRDLPKFSSSDAHARASRCV
ATAQVAERSPNIH
>Mature_92_residues
PQAVRCNAVNRASQSFIYRTMVRILYAGYLALALYLIYPMVQNTLTFSSDCVLRALPGGNRDLPKFSSSDAHARASRCVA
TAQVAERSPNIH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10278; Mature: 10147

Theoretical pI: Translated: 9.93; Mature: 9.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPQAVRCNAVNRASQSFIYRTMVRILYAGYLALALYLIYPMVQNTLTFSSDCVLRALPGG
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCC
NRDLPKFSSSDAHARASRCVATAQVAERSPNIH
CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
PQAVRCNAVNRASQSFIYRTMVRILYAGYLALALYLIYPMVQNTLTFSSDCVLRALPGG
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCC
NRDLPKFSSSDAHARASRCVATAQVAERSPNIH
CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA