| Definition | Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008390 |
| Length | 3,556,545 |
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The map label for this gene is 115351530
Identifier: 115351530
GI number: 115351530
Start: 1623215
End: 1623775
Strand: Direct
Name: 115351530
Synonym: Bamb_1477
Alternate gene names: NA
Gene position: 1623215-1623775 (Clockwise)
Preceding gene: 115351529
Following gene: 115351531
Centisome position: 45.64
GC content: 67.74
Gene sequence:
>561_bases TTGACGGGAGCGGCCGAAACGGTGAGCGACGCAAGCGAAACGAACGATTCCGGCTGGCATGTCGATCCGGTTGCCGGAAC GGTGATCGGCGCGTTGCCGGTGGTCCTGCCGGTCGACGGCCGCAGTTTCAGGCGCAAGGCGATCGTCAGCGCGGTGCTGG CCGGGTTGGCCGTATCCGGGTACGCGTCCGACCGGACGCTCTGGCCGGTTGGGGCACTGGCCGTGGTGCTGGCCCTCGCG AGCGGCGCCTTCTTCTTCGTGTCGCGCCGCAAGATGGCGCTGCATATCGACGAAACCGGCTTCAGGCTGGTCGGTTCCGT GCGTGAAAAGCCGGTGACGCGGTGGCGCGACGTGACCGAGTTCGGGATGATCAGCGTCGCAGGCAACCGGTACATCGGCT ACCAGTTCTCGGCGCACTCGCCGCGCACCAGGGTGCCCGGCGGCGTGATGCTGCCGATTAACCGGTTCGCCGACCTTCCG CTCGACGCCGTTGCCGCGTTGCTCGAAGCGTGCCGCCGGCAGTTCGGCATGCCGGATGATCCTGTCGGCCGAACGGACTG A
Upstream 100 bases:
>100_bases CGGCGCCGATTCGCGGAATCGGTGTTGCGCCGCACCTCGCCGCGCAGAGTCACTGGGCGGTCGGTCAATGCACGTCGAAC GGCACGGTCAACGTGTGCAA
Downstream 100 bases:
>100_bases TTCCGTGCGTCGTGCGTGATCTGGCCGGCCAGTCGCGAGCGCTAAAAAAATTCCGGCATGCGTGTCGATTTCCGTCGAGC CCGTCCGTCGTAGCGTTGGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 186; Mature: 185
Protein sequence:
>186_residues MTGAAETVSDASETNDSGWHVDPVAGTVIGALPVVLPVDGRSFRRKAIVSAVLAGLAVSGYASDRTLWPVGALAVVLALA SGAFFFVSRRKMALHIDETGFRLVGSVREKPVTRWRDVTEFGMISVAGNRYIGYQFSAHSPRTRVPGGVMLPINRFADLP LDAVAALLEACRRQFGMPDDPVGRTD
Sequences:
>Translated_186_residues MTGAAETVSDASETNDSGWHVDPVAGTVIGALPVVLPVDGRSFRRKAIVSAVLAGLAVSGYASDRTLWPVGALAVVLALA SGAFFFVSRRKMALHIDETGFRLVGSVREKPVTRWRDVTEFGMISVAGNRYIGYQFSAHSPRTRVPGGVMLPINRFADLP LDAVAALLEACRRQFGMPDDPVGRTD >Mature_185_residues TGAAETVSDASETNDSGWHVDPVAGTVIGALPVVLPVDGRSFRRKAIVSAVLAGLAVSGYASDRTLWPVGALAVVLALAS GAFFFVSRRKMALHIDETGFRLVGSVREKPVTRWRDVTEFGMISVAGNRYIGYQFSAHSPRTRVPGGVMLPINRFADLPL DAVAALLEACRRQFGMPDDPVGRTD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19885; Mature: 19754
Theoretical pI: Translated: 9.17; Mature: 9.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGAAETVSDASETNDSGWHVDPVAGTVIGALPVVLPVDGRSFRRKAIVSAVLAGLAVSG CCCCHHHHHHHHCCCCCCCEECHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHHHCC YASDRTLWPVGALAVVLALASGAFFFVSRRKMALHIDETGFRLVGSVREKPVTRWRDVTE CCCCCCCCHHHHHHHHHHHHCCCEEEEECCEEEEEECCCCHHHHHHHHHCHHHHHHHHHH FGMISVAGNRYIGYQFSAHSPRTRVPGGVMLPINRFADLPLDAVAALLEACRRQFGMPDD HCEEEECCCEEEEEEECCCCCCCCCCCCEEEEHHHHCCCCHHHHHHHHHHHHHHCCCCCC PVGRTD CCCCCC >Mature Secondary Structure TGAAETVSDASETNDSGWHVDPVAGTVIGALPVVLPVDGRSFRRKAIVSAVLAGLAVSG CCCHHHHHHHHCCCCCCCEECHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHHHCC YASDRTLWPVGALAVVLALASGAFFFVSRRKMALHIDETGFRLVGSVREKPVTRWRDVTE CCCCCCCCHHHHHHHHHHHHCCCEEEEECCEEEEEECCCCHHHHHHHHHCHHHHHHHHHH FGMISVAGNRYIGYQFSAHSPRTRVPGGVMLPINRFADLPLDAVAALLEACRRQFGMPDD HCEEEECCCEEEEEEECCCCCCCCCCCCEEEEHHHHCCCCHHHHHHHHHHHHHHCCCCCC PVGRTD CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA