Definition Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence.
Accession NC_008390
Length 3,556,545

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The map label for this gene is 115351529

Identifier: 115351529

GI number: 115351529

Start: 1622964

End: 1623218

Strand: Direct

Name: 115351529

Synonym: Bamb_1476

Alternate gene names: NA

Gene position: 1622964-1623218 (Clockwise)

Preceding gene: 115351528

Following gene: 115351530

Centisome position: 45.63

GC content: 65.49

Gene sequence:

>255_bases
ATGAATCACGCTACCGCGCACGAAGCCATGTCCACATACGCCATTGCCCCGTTGGGAGCCGCATTCTGTCTGATGCTCGC
GGCCTGTCAGACCGAATCCATGCAGCCGTCGCCCGAGACCGCATCGGCCCCGGTTCCGGCGTCGTCGCCGGCGGCGCCGA
TTCGCGGAATCGGTGTTGCGCCGCACCTCGCCGCGCAGAGTCACTGGGCGGTCGGTCAATGCACGTCGAACGGCACGGTC
AACGTGTGCAATTGA

Upstream 100 bases:

>100_bases
ATCGAGCTCGACATCGATGCGACGAACGAGTCGCGTACGTTGCGTGATCTTCCGCAGATCTGAAAGGCGATCGGCCCGTG
TTTCCGCGAGCCGCCCACAC

Downstream 100 bases:

>100_bases
CGGGAGCGGCCGAAACGGTGAGCGACGCAAGCGAAACGAACGATTCCGGCTGGCATGTCGATCCGGTTGCCGGAACGGTG
ATCGGCGCGTTGCCGGTGGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 84; Mature: 84

Protein sequence:

>84_residues
MNHATAHEAMSTYAIAPLGAAFCLMLAACQTESMQPSPETASAPVPASSPAAPIRGIGVAPHLAAQSHWAVGQCTSNGTV
NVCN

Sequences:

>Translated_84_residues
MNHATAHEAMSTYAIAPLGAAFCLMLAACQTESMQPSPETASAPVPASSPAAPIRGIGVAPHLAAQSHWAVGQCTSNGTV
NVCN
>Mature_84_residues
MNHATAHEAMSTYAIAPLGAAFCLMLAACQTESMQPSPETASAPVPASSPAAPIRGIGVAPHLAAQSHWAVGQCTSNGTV
NVCN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8446; Mature: 8446

Theoretical pI: Translated: 6.48; Mature: 6.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.8 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
9.5 %Cys+Met (Translated Protein)
4.8 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
9.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNHATAHEAMSTYAIAPLGAAFCLMLAACQTESMQPSPETASAPVPASSPAAPIRGIGVA
CCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PHLAAQSHWAVGQCTSNGTVNVCN
CCCCCCCCCCEEEECCCCEEEECC
>Mature Secondary Structure
MNHATAHEAMSTYAIAPLGAAFCLMLAACQTESMQPSPETASAPVPASSPAAPIRGIGVA
CCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PHLAAQSHWAVGQCTSNGTVNVCN
CCCCCCCCCCEEEECCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA