| Definition | Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008390 |
| Length | 3,556,545 |
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The map label for this gene is 115351528
Identifier: 115351528
GI number: 115351528
Start: 1622618
End: 1622926
Strand: Direct
Name: 115351528
Synonym: Bamb_1475
Alternate gene names: NA
Gene position: 1622618-1622926 (Clockwise)
Preceding gene: 115351525
Following gene: 115351529
Centisome position: 45.62
GC content: 64.4
Gene sequence:
>309_bases ATGTCGATGTTCGCTGTGAATGGTGTCCGAATCGACGTGCTCAGTGCGCGCGTGACGCATGTGCGCTGGGCGGCCGTCAA TCCGACGGATCGGTCGTGGGCGGCGACGCCGAGCGAGGCGTCGGTGGAGGAAGTGGCACGCGCGCTTGCCGCGGGCAACG ACGTTCATGCCGTGTTTGACGAAGTGGACGGAACGGCGGTGGGGCCGAAACTGAAGCGCGTGCTGTATCGCGACGCGTCG GCAGGGATCGAGCTCGACATCGATGCGACGAACGAGTCGCGTACGTTGCGTGATCTTCCGCAGATCTGA
Upstream 100 bases:
>100_bases CGGCGGGTCCGGTGGCATTCGCATTCGCCTGCTATCGTGTAATCGTCGGCTTCCGTCGTCAGGCGTGCGCCCAGCCGCAA TCGTTTCGAAGGAGATTCCG
Downstream 100 bases:
>100_bases AAGGCGATCGGCCCGTGTTTCCGCGAGCCGCCCACACATGAATCACGCTACCGCGCACGAAGCCATGTCCACATACGCCA TTGCCCCGTTGGGAGCCGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 102; Mature: 101
Protein sequence:
>102_residues MSMFAVNGVRIDVLSARVTHVRWAAVNPTDRSWAATPSEASVEEVARALAAGNDVHAVFDEVDGTAVGPKLKRVLYRDAS AGIELDIDATNESRTLRDLPQI
Sequences:
>Translated_102_residues MSMFAVNGVRIDVLSARVTHVRWAAVNPTDRSWAATPSEASVEEVARALAAGNDVHAVFDEVDGTAVGPKLKRVLYRDAS AGIELDIDATNESRTLRDLPQI >Mature_101_residues SMFAVNGVRIDVLSARVTHVRWAAVNPTDRSWAATPSEASVEEVARALAAGNDVHAVFDEVDGTAVGPKLKRVLYRDASA GIELDIDATNESRTLRDLPQI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11002; Mature: 10871
Theoretical pI: Translated: 4.81; Mature: 4.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSMFAVNGVRIDVLSARVTHVRWAAVNPTDRSWAATPSEASVEEVARALAAGNDVHAVFD CCEEECCCEEEEEEECEECEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHH EVDGTAVGPKLKRVLYRDASAGIELDIDATNESRTLRDLPQI CCCCCCCCHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCC >Mature Secondary Structure SMFAVNGVRIDVLSARVTHVRWAAVNPTDRSWAATPSEASVEEVARALAAGNDVHAVFD CEEECCCEEEEEEECEECEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHH EVDGTAVGPKLKRVLYRDASAGIELDIDATNESRTLRDLPQI CCCCCCCCHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA