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The map label for this gene is yulF [H]

Identifier: 115351505

GI number: 115351505

Start: 1602211

End: 1603197

Strand: Direct

Name: yulF [H]

Synonym: Bamb_1452

Alternate gene names: 115351505

Gene position: 1602211-1603197 (Clockwise)

Preceding gene: 115351504

Following gene: 115351512

Centisome position: 45.05

GC content: 69.3

Gene sequence:

>987_bases
ATGAACGACCTCGACAACCGCCCGGTGCGCTTCGGCATCGTCGGCGCAGGCAGCATCGCACGCCGTTTCGCGCAAAGCCT
CGCTCACGTGCCGGGCGCCGCGCTCGCCGGCGTGTGGGCACGCCGCGCCGACGCGGCAGCCGCCTTCTGCGACAGCTGCG
GCGGCACGCCCGCGGCCAGCCTCGACGCGCTCCTCGCGAGCGACATCGACGCGATCTACATCGCGACCCTTCACGACAGC
CATGCGCAGTACGCGCAGGCGGCGCTCGCCGCCGGCAAGGCCGTGCTGTGCGAAAAGCCGGCGACGCTGAACGCAGCGCA
ACTCGACGCGGTGCTGGACGCGGCGCGCGCTGCCGGACGGCTCTTCATGGAAGCGATGAAGCCGCCGTTCTTTCCGCTGT
ACCGGCAGTTACGTGCGCATCTGCGCGACGATCCGATCGGCGAGATCCGGCTCGTGCGCGCGGGCTGCGCGTCGTCGTCG
GTGCCGGACGATCATTCCGTCTATCGACTCGACCGCGCCGGCGGCGCGCTGCTCGACATCGGGATCTACGAAGCGTTTCT
CGCGGTCGACTGGCTCGGCGCCGCACTTGATGTGCAGACGCTCGGCCGTATCGGCGCGACGGGCGTCGACGTCTTCGCGA
GCCTGAACAGCCGCCACGCGAATGGCGGCATCGCGCAGCTCTTTTGCGGGCTCGACGTGATGGGACGCGGCGACGCGCTG
ATCGCCGCGGCGGGCGGCCACGTGACGATTCACGAGAAGTGGTGGAACCCCACGCGGGCGACGATTCGCTATGCCGACGG
ACGTACCGTCGAACTCGATGCACCGTTCGACGGCGGCGGCCTGAACTACGAGACCGCGCATTTCTGTGACCTTCTGCGCG
CGGGTGAACTGGAGAGCCCGATCATGACGCACGACCATTCACGACAGATGATCGCGATGACCGACGCGGCGCGCGCGGCG
CTCGGCGTGCGCTATTCGGGCGAGTAG

Upstream 100 bases:

>100_bases
TCCACCCGCGTCGCTTAGCCGTGAGCCGGTGAGCCGTTTATCATGACGGCCGGCCGGCAGCGTGTCGGCCACCGTCATAC
GAACGACACGGAAGATCCGG

Downstream 100 bases:

>100_bases
GCGGGAAGGAAGGGGCCGGGCGCGCATCCGCGGCCCGGCGGGTGATGCAGCGTGCTCAGTGCCGCGCGGGCAGCGACAGG
CGCTTTTCGTACCAGCGCTG

Product: oxidoreductase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 328; Mature: 328

Protein sequence:

>328_residues
MNDLDNRPVRFGIVGAGSIARRFAQSLAHVPGAALAGVWARRADAAAAFCDSCGGTPAASLDALLASDIDAIYIATLHDS
HAQYAQAALAAGKAVLCEKPATLNAAQLDAVLDAARAAGRLFMEAMKPPFFPLYRQLRAHLRDDPIGEIRLVRAGCASSS
VPDDHSVYRLDRAGGALLDIGIYEAFLAVDWLGAALDVQTLGRIGATGVDVFASLNSRHANGGIAQLFCGLDVMGRGDAL
IAAAGGHVTIHEKWWNPTRATIRYADGRTVELDAPFDGGGLNYETAHFCDLLRAGELESPIMTHDHSRQMIAMTDAARAA
LGVRYSGE

Sequences:

>Translated_328_residues
MNDLDNRPVRFGIVGAGSIARRFAQSLAHVPGAALAGVWARRADAAAAFCDSCGGTPAASLDALLASDIDAIYIATLHDS
HAQYAQAALAAGKAVLCEKPATLNAAQLDAVLDAARAAGRLFMEAMKPPFFPLYRQLRAHLRDDPIGEIRLVRAGCASSS
VPDDHSVYRLDRAGGALLDIGIYEAFLAVDWLGAALDVQTLGRIGATGVDVFASLNSRHANGGIAQLFCGLDVMGRGDAL
IAAAGGHVTIHEKWWNPTRATIRYADGRTVELDAPFDGGGLNYETAHFCDLLRAGELESPIMTHDHSRQMIAMTDAARAA
LGVRYSGE
>Mature_328_residues
MNDLDNRPVRFGIVGAGSIARRFAQSLAHVPGAALAGVWARRADAAAAFCDSCGGTPAASLDALLASDIDAIYIATLHDS
HAQYAQAALAAGKAVLCEKPATLNAAQLDAVLDAARAAGRLFMEAMKPPFFPLYRQLRAHLRDDPIGEIRLVRAGCASSS
VPDDHSVYRLDRAGGALLDIGIYEAFLAVDWLGAALDVQTLGRIGATGVDVFASLNSRHANGGIAQLFCGLDVMGRGDAL
IAAAGGHVTIHEKWWNPTRATIRYADGRTVELDAPFDGGGLNYETAHFCDLLRAGELESPIMTHDHSRQMIAMTDAARAA
LGVRYSGE

Specific function: Unknown

COG id: COG0673

COG function: function code R; Predicted dehydrogenases and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

Organism=Homo sapiens, GI7657212, Length=328, Percent_Identity=31.0975609756098, Blast_Score=130, Evalue=2e-30,
Organism=Escherichia coli, GI145693182, Length=212, Percent_Identity=31.6037735849057, Blast_Score=82, Evalue=7e-17,
Organism=Drosophila melanogaster, GI24581117, Length=334, Percent_Identity=28.4431137724551, Blast_Score=121, Evalue=6e-28,
Organism=Drosophila melanogaster, GI24584727, Length=333, Percent_Identity=26.1261261261261, Blast_Score=98, Evalue=8e-21,
Organism=Drosophila melanogaster, GI24581115, Length=276, Percent_Identity=30.0724637681159, Blast_Score=93, Evalue=2e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 34634; Mature: 34634

Theoretical pI: Translated: 6.12; Mature: 6.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDLDNRPVRFGIVGAGSIARRFAQSLAHVPGAALAGVWARRADAAAAFCDSCGGTPAAS
CCCCCCCCEEEEEEECCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHH
LDALLASDIDAIYIATLHDSHAQYAQAALAAGKAVLCEKPATLNAAQLDAVLDAARAAGR
HHHHHHCCCCEEEEEEECCCHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHHHH
LFMEAMKPPFFPLYRQLRAHLRDDPIGEIRLVRAGCASSSVPDDHSVYRLDRAGGALLDI
HHHHHHCCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCEEEEECCCCCEEEH
GIYEAFLAVDWLGAALDVQTLGRIGATGVDVFASLNSRHANGGIAQLFCGLDVMGRGDAL
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCHHHHHHCCEECCCCCEE
IAAAGGHVTIHEKWWNPTRATIRYADGRTVELDAPFDGGGLNYETAHFCDLLRAGELESP
EEECCCEEEEEECCCCCCEEEEEECCCCEEEEECCCCCCCCCCCHHHHHHHHHCCCCCCC
IMTHDHSRQMIAMTDAARAALGVRYSGE
CCCCCCCCEEEEEHHHHHHHHCCEECCC
>Mature Secondary Structure
MNDLDNRPVRFGIVGAGSIARRFAQSLAHVPGAALAGVWARRADAAAAFCDSCGGTPAAS
CCCCCCCCEEEEEEECCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHH
LDALLASDIDAIYIATLHDSHAQYAQAALAAGKAVLCEKPATLNAAQLDAVLDAARAAGR
HHHHHHCCCCEEEEEEECCCHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHHHH
LFMEAMKPPFFPLYRQLRAHLRDDPIGEIRLVRAGCASSSVPDDHSVYRLDRAGGALLDI
HHHHHHCCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCEEEEECCCCCEEEH
GIYEAFLAVDWLGAALDVQTLGRIGATGVDVFASLNSRHANGGIAQLFCGLDVMGRGDAL
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCHHHHHHCCEECCCCCEE
IAAAGGHVTIHEKWWNPTRATIRYADGRTVELDAPFDGGGLNYETAHFCDLLRAGELESP
EEECCCEEEEEECCCCCCEEEEEECCCCEEEEECCCCCCCCCCCHHHHHHHHHCCCCCCC
IMTHDHSRQMIAMTDAARAALGVRYSGE
CCCCCCCCEEEEEHHHHHHHHCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9274030; 9384377 [H]