Definition Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence.
Accession NC_008390
Length 3,556,545

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The map label for this gene is 115351488

Identifier: 115351488

GI number: 115351488

Start: 1586743

End: 1587273

Strand: Direct

Name: 115351488

Synonym: Bamb_1435

Alternate gene names: NA

Gene position: 1586743-1587273 (Clockwise)

Preceding gene: 115351487

Following gene: 115351489

Centisome position: 44.61

GC content: 67.04

Gene sequence:

>531_bases
ATGAAGCGTCTTGACGAACTGGATTTCGCGGCGCCGCGCGTGCGCGCCACGCCGTGGGCGGCCGTCGCGCTGTGTTGCGC
ATTGCTGACCGGCGCGTTCGCCGCGAGCGAGTGGTCGCGCGTCGATCAGTTGCGCGACGAGGTCGACGGCATCGAAAGCC
GGATCGACGAGCGCCAACGCGCGATCGAGCGCGAGCGGCGCCGGCAGAAGACGATGACGCCGGAGCAGCGCCGCATCGAA
CGCGTGCTCGCCGAGCAGCGGATGAGCGAGAAAGGCTCGGGGCTGTCGGTGGTCGACTGGATCGAGCAGGCGTGGACGCC
GCAGATCGCGCTGAAGTCGCTGACGGTCGACAAGGCCGGCCGTGAGGCGCGCATCGAAGGCGGCGCGGCGGAGCTGTCGC
ACATCTACATCTTCGTCGACCGACTGAACGATCGTCACCCGGACCGCAAGATCGGCCTGCTGCAGCACCGCACGAAAGCG
GAGGACGGCAAGGACATCTTTCATTTCAGCCTGAGCATCGAACACCCATGA

Upstream 100 bases:

>100_bases
TCGCGAGTGCGCTCGACGGGGCGCTGCCGGTCGAGGACGGCGTGACGCTGCTCGATGGCGGCCCGGATCACGTGCCCGTG
CGCGAGCCGGGAGCGCCGGC

Downstream 100 bases:

>100_bases
CGAACCTGAAAGCAATCGACATGACGGCGCTTGCCGCGCGGCTGCGCTGGGGCGCCTATGCGGCGGCCCGCAAGCTCGGC
GCAGCGGGGCTGCTGGCGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 176; Mature: 176

Protein sequence:

>176_residues
MKRLDELDFAAPRVRATPWAAVALCCALLTGAFAASEWSRVDQLRDEVDGIESRIDERQRAIERERRRQKTMTPEQRRIE
RVLAEQRMSEKGSGLSVVDWIEQAWTPQIALKSLTVDKAGREARIEGGAAELSHIYIFVDRLNDRHPDRKIGLLQHRTKA
EDGKDIFHFSLSIEHP

Sequences:

>Translated_176_residues
MKRLDELDFAAPRVRATPWAAVALCCALLTGAFAASEWSRVDQLRDEVDGIESRIDERQRAIERERRRQKTMTPEQRRIE
RVLAEQRMSEKGSGLSVVDWIEQAWTPQIALKSLTVDKAGREARIEGGAAELSHIYIFVDRLNDRHPDRKIGLLQHRTKA
EDGKDIFHFSLSIEHP
>Mature_176_residues
MKRLDELDFAAPRVRATPWAAVALCCALLTGAFAASEWSRVDQLRDEVDGIESRIDERQRAIERERRRQKTMTPEQRRIE
RVLAEQRMSEKGSGLSVVDWIEQAWTPQIALKSLTVDKAGREARIEGGAAELSHIYIFVDRLNDRHPDRKIGLLQHRTKA
EDGKDIFHFSLSIEHP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20212; Mature: 20212

Theoretical pI: Translated: 7.64; Mature: 7.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRLDELDFAAPRVRATPWAAVALCCALLTGAFAASEWSRVDQLRDEVDGIESRIDERQR
CCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AIERERRRQKTMTPEQRRIERVLAEQRMSEKGSGLSVVDWIEQAWTPQIALKSLTVDKAG
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHCCC
REARIEGGAAELSHIYIFVDRLNDRHPDRKIGLLQHRTKAEDGKDIFHFSLSIEHP
CCCCCCCCHHHHHHHHEEEECCCCCCCCHHHHHHHHHHCCCCCCEEEEEEEEECCC
>Mature Secondary Structure
MKRLDELDFAAPRVRATPWAAVALCCALLTGAFAASEWSRVDQLRDEVDGIESRIDERQR
CCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AIERERRRQKTMTPEQRRIERVLAEQRMSEKGSGLSVVDWIEQAWTPQIALKSLTVDKAG
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHCCC
REARIEGGAAELSHIYIFVDRLNDRHPDRKIGLLQHRTKAEDGKDIFHFSLSIEHP
CCCCCCCCHHHHHHHHEEEECCCCCCCCHHHHHHHHHHCCCCCCEEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA