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The map label for this gene is rbsK [H]

Identifier: 115351396

GI number: 115351396

Start: 1476758

End: 1477687

Strand: Direct

Name: rbsK [H]

Synonym: Bamb_1343

Alternate gene names: 115351396

Gene position: 1476758-1477687 (Clockwise)

Preceding gene: 115351394

Following gene: 115351397

Centisome position: 41.52

GC content: 71.51

Gene sequence:

>930_bases
ATGATGAATTCTGTAAAGCCACCGCGGATCGCCGTCGTCGGCAGCGTCAACGTCGATCTCGTCACGCGCGCGCCGCGTCT
GCCCGTACCGGGCGAAACACTGCTCGGCACCTCGTTCCAGACCGTCCACGGCGGCAAGGGGGCGAACCAGGCGGTGGCCG
CCGCGCGGCTCGGTGCGTCGGTCGCGATGATCGGCTGCGTCGGCAACGACGCGTTCGGCGCACGCCTGCACGACGCGCTT
GCGGCGGAGCGTATCGACGTCACGCACCTGCGCCGGATCGACGGCGAGGCCACCGGCGTGGCCACGATCACGGTCGACGC
ACACGGGGCGAACAGCATCGTCGTCGTGCCCGGTGCGAACGCCTGCGTCGATGCCGCCTTGATCGACGCGTCGCGCGACG
TGATCGCCGGCGCGGCGCTGATGGTGTGCCAGCTCGAGGTGCCGATCGAGACCGTCGCGCGCGCCATCGGCAGCGCCATC
GCCCATCGGACGCCCGTGCTGCTCAATCCGGCGCCCGCGCGGCCGCTGTTCGACGCATTGCTGGCCCGCATCGACTACCT
CGTCGTCAACGAGACGGAGGCGGAGTCGCTGACCGGCATCGCTGTCGGCGACGACGCGTCGGCAGTGCGCGCCGCCGATG
CGCTGTGCGCGAAGGGCGTCGGCAACGTGCTGGTCACGCTCGGCGCGCGCGGTGTCTGCTGGCGAGGGATTGCGGGGCAG
GGCCGCCATCGGGCGAGGGCAGTGGTCGCCGTCGATACGACGGCGGCCGGCGACACCTTCGTCGGCGGCTTCGCGGCGGC
CCGTGCGAGCGGTGCGTCGATGGATGACGCCATTGCGTTCGGCCAGCACGCGGCCGCGATCAGCGTGACGCGCCACGGCG
CGCAGACCTCGATTCCGACACGCGAAGAAGTGGAGCGTGCGGCCGTATAG

Upstream 100 bases:

>100_bases
GTATTATGTCAGACATAGATTCCTGCTGCATTGCGAAGTTTTCGTCGACGTCGGCCTTTCCGGCCATTTTGTTTGCCTCA
AATGTAAGCGGTTACATTCG

Downstream 100 bases:

>100_bases
ATTCCGCGACGACGGAACGGGCAGCAGCCCGGCCAACCATTCAGGACAATGGAGACAGACGCAATGAACGAGAATCATGC
AGTTCCGACGGCGCCCCCAC

Product: ribokinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 309; Mature: 309

Protein sequence:

>309_residues
MMNSVKPPRIAVVGSVNVDLVTRAPRLPVPGETLLGTSFQTVHGGKGANQAVAAARLGASVAMIGCVGNDAFGARLHDAL
AAERIDVTHLRRIDGEATGVATITVDAHGANSIVVVPGANACVDAALIDASRDVIAGAALMVCQLEVPIETVARAIGSAI
AHRTPVLLNPAPARPLFDALLARIDYLVVNETEAESLTGIAVGDDASAVRAADALCAKGVGNVLVTLGARGVCWRGIAGQ
GRHRARAVVAVDTTAAGDTFVGGFAAARASGASMDDAIAFGQHAAAISVTRHGAQTSIPTREEVERAAV

Sequences:

>Translated_309_residues
MMNSVKPPRIAVVGSVNVDLVTRAPRLPVPGETLLGTSFQTVHGGKGANQAVAAARLGASVAMIGCVGNDAFGARLHDAL
AAERIDVTHLRRIDGEATGVATITVDAHGANSIVVVPGANACVDAALIDASRDVIAGAALMVCQLEVPIETVARAIGSAI
AHRTPVLLNPAPARPLFDALLARIDYLVVNETEAESLTGIAVGDDASAVRAADALCAKGVGNVLVTLGARGVCWRGIAGQ
GRHRARAVVAVDTTAAGDTFVGGFAAARASGASMDDAIAFGQHAAAISVTRHGAQTSIPTREEVERAAV
>Mature_309_residues
MMNSVKPPRIAVVGSVNVDLVTRAPRLPVPGETLLGTSFQTVHGGKGANQAVAAARLGASVAMIGCVGNDAFGARLHDAL
AAERIDVTHLRRIDGEATGVATITVDAHGANSIVVVPGANACVDAALIDASRDVIAGAALMVCQLEVPIETVARAIGSAI
AHRTPVLLNPAPARPLFDALLARIDYLVVNETEAESLTGIAVGDDASAVRAADALCAKGVGNVLVTLGARGVCWRGIAGQ
GRHRARAVVAVDTTAAGDTFVGGFAAARASGASMDDAIAFGQHAAAISVTRHGAQTSIPTREEVERAAV

Specific function: Ribose metabolism; first step. [C]

COG id: COG0524

COG function: function code G; Sugar kinases, ribokinase family

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the carbohydrate kinase pfkB family [H]

Homologues:

Organism=Homo sapiens, GI11545855, Length=296, Percent_Identity=39.8648648648649, Blast_Score=174, Evalue=9e-44,
Organism=Escherichia coli, GI1790193, Length=297, Percent_Identity=48.4848484848485, Blast_Score=239, Evalue=2e-64,
Organism=Escherichia coli, GI87082343, Length=300, Percent_Identity=29.6666666666667, Blast_Score=84, Evalue=8e-18,
Organism=Escherichia coli, GI87081971, Length=274, Percent_Identity=28.1021897810219, Blast_Score=74, Evalue=9e-15,
Organism=Escherichia coli, GI1788491, Length=290, Percent_Identity=22.4137931034483, Blast_Score=61, Evalue=8e-11,
Organism=Caenorhabditis elegans, GI17532905, Length=306, Percent_Identity=39.8692810457516, Blast_Score=188, Evalue=4e-48,
Organism=Saccharomyces cerevisiae, GI6319884, Length=331, Percent_Identity=33.5347432024169, Blast_Score=144, Evalue=2e-35,
Organism=Drosophila melanogaster, GI20128807, Length=304, Percent_Identity=35.5263157894737, Blast_Score=152, Evalue=2e-37,
Organism=Drosophila melanogaster, GI24583886, Length=306, Percent_Identity=31.3725490196078, Blast_Score=146, Evalue=2e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011611
- InterPro:   IPR002173
- InterPro:   IPR011877
- InterPro:   IPR002139 [H]

Pfam domain/function: PF00294 PfkB [H]

EC number: =2.7.1.15 [H]

Molecular weight: Translated: 31245; Mature: 31245

Theoretical pI: Translated: 6.71; Mature: 6.71

Prosite motif: PS00584 PFKB_KINASES_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMNSVKPPRIAVVGSVNVDLVTRAPRLPVPGETLLGTSFQTVHGGKGANQAVAAARLGAS
CCCCCCCCCEEEEECCCEEEEECCCCCCCCCCHHCCCCEEEECCCCCCCHHHHHHHHCCE
VAMIGCVGNDAFGARLHDALAAERIDVTHLRRIDGEATGVATITVDAHGANSIVVVPGAN
EEEEEEECCCCHHHHHHHHHHHHHCCHHHHHHCCCCCCEEEEEEEECCCCCEEEEECCCC
ACVDAALIDASRDVIAGAALMVCQLEVPIETVARAIGSAIAHRTPVLLNPAPARPLFDAL
HHHHHHHHHCCCHHHHHHEEEEEEECCCHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHH
LARIDYLVVNETEAESLTGIAVGDDASAVRAADALCAKGVGNVLVTLGARGVCWRGIAGQ
HHHHEEEEEECCCHHHEEEEEECCCCHHHHHHHHHHHCCCCCEEEEECCCCEEECCCCCC
GRHRARAVVAVDTTAAGDTFVGGFAAARASGASMDDAIAFGQHAAAISVTRHGAQTSIPT
CCCCEEEEEEEECCCCCCCHHHHHHHHHCCCCCCHHHHHHCCCCEEEEEEECCCCCCCCC
REEVERAAV
HHHHHHHCC
>Mature Secondary Structure
MMNSVKPPRIAVVGSVNVDLVTRAPRLPVPGETLLGTSFQTVHGGKGANQAVAAARLGAS
CCCCCCCCCEEEEECCCEEEEECCCCCCCCCCHHCCCCEEEECCCCCCCHHHHHHHHCCE
VAMIGCVGNDAFGARLHDALAAERIDVTHLRRIDGEATGVATITVDAHGANSIVVVPGAN
EEEEEEECCCCHHHHHHHHHHHHHCCHHHHHHCCCCCCEEEEEEEECCCCCEEEEECCCC
ACVDAALIDASRDVIAGAALMVCQLEVPIETVARAIGSAIAHRTPVLLNPAPARPLFDAL
HHHHHHHHHCCCHHHHHHEEEEEEECCCHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHH
LARIDYLVVNETEAESLTGIAVGDDASAVRAADALCAKGVGNVLVTLGARGVCWRGIAGQ
HHHHEEEEEECCCHHHEEEEEECCCCHHHHHHHHHHHCCCCCEEEEECCCCEEECCCCCC
GRHRARAVVAVDTTAAGDTFVGGFAAARASGASMDDAIAFGQHAAAISVTRHGAQTSIPT
CCCCEEEEEEEECCCCCCCHHHHHHHHHCCCCCCHHHHHHCCCCEEEEEEECCCCCCCCC
REEVERAAV
HHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]