The gene/protein map for NC_008390 is currently unavailable.
Definition Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence.
Accession NC_008390
Length 3,556,545

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The map label for this gene is hexR [C]

Identifier: 115351364

GI number: 115351364

Start: 1438365

End: 1439249

Strand: Direct

Name: hexR [C]

Synonym: Bamb_1311

Alternate gene names: 115351364

Gene position: 1438365-1439249 (Clockwise)

Preceding gene: 115351363

Following gene: 115351366

Centisome position: 40.44

GC content: 67.68

Gene sequence:

>885_bases
ATGAGTTCATCCGAGAAACCTCCCGCCACCGTCGAGCAGTTCCTGCAGCATCTGACGCAGGAGTACGACGGCCTCAGCAA
TCGCCTGAAGGTGATTGCGCGTCATGTGGAAACGCATCGCGACCAGCTTGGCCTGGAGGGCATCCAGTCGCTCGCGGAGG
CCTGCGGCGTCCAGCCGTCGGCCGTCGTGCGGTTCGCGAAGCATTTCGGCTTCTCCGGCTTCTCCGAGATGCAGCGGCTG
TTCCGCGAGGGCCTGGCCCAGCAGATCGCGCCGGGCCGCGCGTACAACCTGCGGTTGCGCGACGTGATCGAATCGGGCTC
GTCGAGCCTGCAGCCCGAGCAGATCGCCGACGAATTCATCAAGGGCAGCATCGCCGGGATGCAGCAGCTGCGGCAGACGC
TCGATCCGCAGGCGCTCGCGCAGGCCGTCGACCTGCTCGCCGACACGCAGGCAATCTGGATCGCCGGTTCGCGCCGCGCG
TTTCCGATCGCCGTGTATCTCGACTATGCGCTGCAGCACACCGACAAGCGCATCGGCCTGTTCAGCGCGCTCGGCAGCAT
GCATCTCGGCCAGATCCGCTCGGTGCGCGAGGGCGACGTGATGATCGTGATCTCGTTCATGCCGTATGCGGAAGAGACCG
TGCAGGTCGCGCAGCAGGCCGTGCAGCGCGGCGCGCGCCTGATCGCGATCACCGATAGCCGGATGAGCCCGCTCGCGCGG
GAGGCCGAGGTGACGCTGATGGTGCAGGACAGCGCGACGTTCGGGTTCCGCGCGCTGACCGCGACGATGGGCCTCGCGCA
GAGCCTGTTCGTCGCGCTCGCGTACCGCCTCGAACTGTCGTACCTGCCGACCGCCGACGGCGCGCACGGCACGAAGGCCG
GCTGA

Upstream 100 bases:

>100_bases
AAACGTGATTAAATTCGCCCTTCATGCATGTATTCAGGGGAGTCCCGGGCCGCGCCCACAGGCCGCGCGTGCGTCGGGGC
CGTCAACTTCGCGCTATCCG

Downstream 100 bases:

>100_bases
CCATGCGCTTGCCCGCCGCCCGCGGGATTGCCCGGCGGGCGGCGCACCCGTCCGCTTACTTCGCGGTCGGCATCGCGAAC
TCGGCGCCCTTGCCGATGCT

Product: RpiR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator RpiR Family; Transcriptional Regulator; SIS Domain-Containing Protein; SIS Domain Protein; Sugar Isomerase; Transcriptional Regulator Rpir Family; Transcriptional Regulator Protein; Transcriptional Regulator RpiR Family Protein; N-Acylmannosamine Kinase; RpiR-Family Transcriptional Regulator; Transcriptional Regulator Of Myo-Inositol Catabolism Operon; SIS Family Regulator; Bifunctional Protein Glk; Transcriptional Regulator IolR; Transcription Regulator Protein; RpiR Family Regulatory; Transcription Regulator; RpiR Family Transcription Regulator Protein; Sugar Isomerase Family Protein; Helix-Turn-Helix Domain RpiR Family

Number of amino acids: Translated: 294; Mature: 293

Protein sequence:

>294_residues
MSSSEKPPATVEQFLQHLTQEYDGLSNRLKVIARHVETHRDQLGLEGIQSLAEACGVQPSAVVRFAKHFGFSGFSEMQRL
FREGLAQQIAPGRAYNLRLRDVIESGSSSLQPEQIADEFIKGSIAGMQQLRQTLDPQALAQAVDLLADTQAIWIAGSRRA
FPIAVYLDYALQHTDKRIGLFSALGSMHLGQIRSVREGDVMIVISFMPYAEETVQVAQQAVQRGARLIAITDSRMSPLAR
EAEVTLMVQDSATFGFRALTATMGLAQSLFVALAYRLELSYLPTADGAHGTKAG

Sequences:

>Translated_294_residues
MSSSEKPPATVEQFLQHLTQEYDGLSNRLKVIARHVETHRDQLGLEGIQSLAEACGVQPSAVVRFAKHFGFSGFSEMQRL
FREGLAQQIAPGRAYNLRLRDVIESGSSSLQPEQIADEFIKGSIAGMQQLRQTLDPQALAQAVDLLADTQAIWIAGSRRA
FPIAVYLDYALQHTDKRIGLFSALGSMHLGQIRSVREGDVMIVISFMPYAEETVQVAQQAVQRGARLIAITDSRMSPLAR
EAEVTLMVQDSATFGFRALTATMGLAQSLFVALAYRLELSYLPTADGAHGTKAG
>Mature_293_residues
SSSEKPPATVEQFLQHLTQEYDGLSNRLKVIARHVETHRDQLGLEGIQSLAEACGVQPSAVVRFAKHFGFSGFSEMQRLF
REGLAQQIAPGRAYNLRLRDVIESGSSSLQPEQIADEFIKGSIAGMQQLRQTLDPQALAQAVDLLADTQAIWIAGSRRAF
PIAVYLDYALQHTDKRIGLFSALGSMHLGQIRSVREGDVMIVISFMPYAEETVQVAQQAVQRGARLIAITDSRMSPLARE
AEVTLMVQDSATFGFRALTATMGLAQSLFVALAYRLELSYLPTADGAHGTKAG

Specific function: Represses The Expression Of The Hex Regulon (Zwf, Eda, Glp And Gap) (By Similarity). [C]

COG id: COG1737

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32166; Mature: 32035

Theoretical pI: Translated: 6.64; Mature: 6.64

Prosite motif: PS51071 HTH_RPIR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSSEKPPATVEQFLQHLTQEYDGLSNRLKVIARHVETHRDQLGLEGIQSLAEACGVQPS
CCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCHH
AVVRFAKHFGFSGFSEMQRLFREGLAQQIAPGRAYNLRLRDVIESGSSSLQPEQIADEFI
HHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHCCCCCCCHHHHHHHHH
KGSIAGMQQLRQTLDPQALAQAVDLLADTQAIWIAGSRRAFPIAVYLDYALQHTDKRIGL
HHHHHHHHHHHHHCCHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHH
FSALGSMHLGQIRSVREGDVMIVISFMPYAEETVQVAQQAVQRGARLIAITDSRMSPLAR
HHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCHHH
EAEVTLMVQDSATFGFRALTATMGLAQSLFVALAYRLELSYLPTADGAHGTKAG
CCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCC
>Mature Secondary Structure 
SSSEKPPATVEQFLQHLTQEYDGLSNRLKVIARHVETHRDQLGLEGIQSLAEACGVQPS
CCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCHH
AVVRFAKHFGFSGFSEMQRLFREGLAQQIAPGRAYNLRLRDVIESGSSSLQPEQIADEFI
HHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHCCCCCCCHHHHHHHHH
KGSIAGMQQLRQTLDPQALAQAVDLLADTQAIWIAGSRRAFPIAVYLDYALQHTDKRIGL
HHHHHHHHHHHHHCCHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHH
FSALGSMHLGQIRSVREGDVMIVISFMPYAEETVQVAQQAVQRGARLIAITDSRMSPLAR
HHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCHHH
EAEVTLMVQDSATFGFRALTATMGLAQSLFVALAYRLELSYLPTADGAHGTKAG
CCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA