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The map label for this gene is yfiI [H]

Identifier: 115351363

GI number: 115351363

Start: 1436921

End: 1438093

Strand: Direct

Name: yfiI [H]

Synonym: Bamb_1310

Alternate gene names: 115351363

Gene position: 1436921-1438093 (Clockwise)

Preceding gene: 115351362

Following gene: 115351364

Centisome position: 40.4

GC content: 67.43

Gene sequence:

>1173_bases
ATGATCGACGGACAGATTCTGCTCGGACATTCGATTCCCTGGGGCATGGTCGGCGGCGGCCTCGGCAGCCAGATCGGCTA
CAGCCACCGGTCGGCCTCGTTGCGCGACGGCAGCTTCCGGCTGGTCGCCGGCGCGTTCGATATCGATGCCGAGCGCGGGC
GGCAGTTCGGCGTGAAGCTCGGCGTCGACGCCGGGCGCTGCTATCCCGACTACCGGACGATGTTCGATGCCGAGGCGCGC
CGCGCCGATGGCATCCGCGCGGTGTCGATCGCGACGCCGAACAACACGCACTTCGAGATCTGCCGCGCGGCGCTCAACGC
AGGGCTGCATGTGGTCTGCGAGAAGCCGCTGTGCTTCACGACCGCGGAGGCCGAGGCGCTCCAGCGGCTGTCGGTCGAGA
AGAACCGCATCGTCGGCGTCGCGTACGGCTATTCGGGCCACCAGATGATCGAGCAGGCGCGCGAGATGATCGCGCGCGGC
GATCTCGGCGAGATCCGCATCGTGCAGATGCAGTTTGCCCACGGCTTTCACAGCGAGGGTGTCGAGGCCGCCAGCGCGGC
CGCGCGCTGGCGCGTCGATCCGACGTTCGCGGGCCCGAGCTACGTGCTCGGCGACATCGGCACGCACCCGCTGTACATCT
CGGAGGTGATGGCGCCCGAGCTGAAGATCCGCCGGCTGATGTGCTCGCGGCAGAGCTTCGTGAAGAGCCGCGCGCCGCTC
GAGGACAACGCGTTCACGATCATGGAATACGACACGGGCGCGATCGGCTACGTCTGGTCGAGCGCGGTGAACGCGGGCTC
GATGCACGGGCAGAAGGTGCGCGTGATCGGCTCGAAGGCGAGCGTCGAATGGTGGGACGAGCATCCGAACCAGTTGCGCT
ACGAAATCCAGGGGCAGCCCGCGCAGGTGCTCGATCGCGGGATGGGCTATCTGCATCCGCACGCATTGCGCGAGGATCGC
ATCGGCGCCGGGCATCCGGAAGGGCTGTTCGAAGCGTGGTCGAACCTGTATGCGCGTTTCGCGCTCGCGATGGACGCGGC
CGATCGCGGCGACACGCAAGCATTGCAGAACATCTGCTTTCCGGACGTTCACGCAGGCGTCGAAGGCGTGCGCTGGGTGG
AGAACTGCGTGCGCTCCGCCGATGCGGGCGGCGTGTGGGTCGACTATCGTTGA

Upstream 100 bases:

>100_bases
GAGCCGCGCGTTTCTCGCGTCGGCCGGATTCGCATGAACGATCGACCGCCTGAACCTTTGAACATCTGAACACCTGAACA
CGGACAGGAACACGACAATC

Downstream 100 bases:

>100_bases
GCGATGGCAGCCGATGCGCGGCATCGGTAGCGGCCCTGATCTTTACGGCGCGGCGAGCGCATTGGAAAATGGGCTCCGGT
ACGGTTCCATTAGGGTTCCC

Product: oxidoreductase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 390; Mature: 390

Protein sequence:

>390_residues
MIDGQILLGHSIPWGMVGGGLGSQIGYSHRSASLRDGSFRLVAGAFDIDAERGRQFGVKLGVDAGRCYPDYRTMFDAEAR
RADGIRAVSIATPNNTHFEICRAALNAGLHVVCEKPLCFTTAEAEALQRLSVEKNRIVGVAYGYSGHQMIEQAREMIARG
DLGEIRIVQMQFAHGFHSEGVEAASAAARWRVDPTFAGPSYVLGDIGTHPLYISEVMAPELKIRRLMCSRQSFVKSRAPL
EDNAFTIMEYDTGAIGYVWSSAVNAGSMHGQKVRVIGSKASVEWWDEHPNQLRYEIQGQPAQVLDRGMGYLHPHALREDR
IGAGHPEGLFEAWSNLYARFALAMDAADRGDTQALQNICFPDVHAGVEGVRWVENCVRSADAGGVWVDYR

Sequences:

>Translated_390_residues
MIDGQILLGHSIPWGMVGGGLGSQIGYSHRSASLRDGSFRLVAGAFDIDAERGRQFGVKLGVDAGRCYPDYRTMFDAEAR
RADGIRAVSIATPNNTHFEICRAALNAGLHVVCEKPLCFTTAEAEALQRLSVEKNRIVGVAYGYSGHQMIEQAREMIARG
DLGEIRIVQMQFAHGFHSEGVEAASAAARWRVDPTFAGPSYVLGDIGTHPLYISEVMAPELKIRRLMCSRQSFVKSRAPL
EDNAFTIMEYDTGAIGYVWSSAVNAGSMHGQKVRVIGSKASVEWWDEHPNQLRYEIQGQPAQVLDRGMGYLHPHALREDR
IGAGHPEGLFEAWSNLYARFALAMDAADRGDTQALQNICFPDVHAGVEGVRWVENCVRSADAGGVWVDYR
>Mature_390_residues
MIDGQILLGHSIPWGMVGGGLGSQIGYSHRSASLRDGSFRLVAGAFDIDAERGRQFGVKLGVDAGRCYPDYRTMFDAEAR
RADGIRAVSIATPNNTHFEICRAALNAGLHVVCEKPLCFTTAEAEALQRLSVEKNRIVGVAYGYSGHQMIEQAREMIARG
DLGEIRIVQMQFAHGFHSEGVEAASAAARWRVDPTFAGPSYVLGDIGTHPLYISEVMAPELKIRRLMCSRQSFVKSRAPL
EDNAFTIMEYDTGAIGYVWSSAVNAGSMHGQKVRVIGSKASVEWWDEHPNQLRYEIQGQPAQVLDRGMGYLHPHALREDR
IGAGHPEGLFEAWSNLYARFALAMDAADRGDTQALQNICFPDVHAGVEGVRWVENCVRSADAGGVWVDYR

Specific function: Unknown

COG id: COG0673

COG function: function code R; Predicted dehydrogenases and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683
- InterPro:   IPR004104 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 42856; Mature: 42856

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDGQILLGHSIPWGMVGGGLGSQIGYSHRSASLRDGSFRLVAGAFDIDAERGRQFGVKL
CCCCCEEEECCCCCHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCHHCCCEECEEE
GVDAGRCYPDYRTMFDAEARRADGIRAVSIATPNNTHFEICRAALNAGLHVVCEKPLCFT
CCCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHCCEEEEECCCCEEE
TAEAEALQRLSVEKNRIVGVAYGYSGHQMIEQAREMIARGDLGEIRIVQMQFAHGFHSEG
CHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCC
VEAASAAARWRVDPTFAGPSYVLGDIGTHPLYISEVMAPELKIRRLMCSRQSFVKSRAPL
CHHHHHHHHCCCCCCCCCCCCEECCCCCCCEEHHHHHCHHHHHHHHHHHHHHHHHHCCCC
EDNAFTIMEYDTGAIGYVWSSAVNAGSMHGQKVRVIGSKASVEWWDEHPNQLRYEIQGQP
CCCCEEEEEECCCCHHHHHHHHCCCCCCCCCEEEEEECCCCEEHHHCCCCEEEEEECCCC
AQVLDRGMGYLHPHALREDRIGAGHPEGLFEAWSNLYARFALAMDAADRGDTQALQNICF
HHHHHCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCC
PDVHAGVEGVRWVENCVRSADAGGVWVDYR
CCHHCCHHHHHHHHHHHHCCCCCCEEEECC
>Mature Secondary Structure
MIDGQILLGHSIPWGMVGGGLGSQIGYSHRSASLRDGSFRLVAGAFDIDAERGRQFGVKL
CCCCCEEEECCCCCHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCHHCCCEECEEE
GVDAGRCYPDYRTMFDAEARRADGIRAVSIATPNNTHFEICRAALNAGLHVVCEKPLCFT
CCCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHCCEEEEECCCCEEE
TAEAEALQRLSVEKNRIVGVAYGYSGHQMIEQAREMIARGDLGEIRIVQMQFAHGFHSEG
CHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCC
VEAASAAARWRVDPTFAGPSYVLGDIGTHPLYISEVMAPELKIRRLMCSRQSFVKSRAPL
CHHHHHHHHCCCCCCCCCCCCEECCCCCCCEEHHHHHCHHHHHHHHHHHHHHHHHHCCCC
EDNAFTIMEYDTGAIGYVWSSAVNAGSMHGQKVRVIGSKASVEWWDEHPNQLRYEIQGQP
CCCCEEEEEECCCCHHHHHHHHCCCCCCCCCEEEEEECCCCEEHHHCCCCEEEEEECCCC
AQVLDRGMGYLHPHALREDRIGAGHPEGLFEAWSNLYARFALAMDAADRGDTQALQNICF
HHHHHCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCC
PDVHAGVEGVRWVENCVRSADAGGVWVDYR
CCHHCCHHHHHHHHHHHHCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8973323; 9384377 [H]