The gene/protein map for NC_008390 is currently unavailable.
Definition Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence.
Accession NC_008390
Length 3,556,545

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The map label for this gene is bcsZ [H]

Identifier: 115351312

GI number: 115351312

Start: 1375059

End: 1376279

Strand: Direct

Name: bcsZ [H]

Synonym: Bamb_1259

Alternate gene names: 115351312

Gene position: 1375059-1376279 (Clockwise)

Preceding gene: 115351311

Following gene: 115351313

Centisome position: 38.66

GC content: 74.61

Gene sequence:

>1221_bases
ATGGCGTGGGCATTCGCAAGGCGACGGGCAACGCGGCCGGCGCGGCGCGTCGGCACGACACTCGTGCTGGCGGTCGCGGC
GGCGTGCGCGGCGACCGGCGCCGCCGGGCGCGCGCAGGCGGCGCAAAGCGGCGCGGCCGACGTGCAGTGCGGCGCGGCGT
GGCCGCGCTGGGACGCGTTCAAGCGCGATTTCGTGTCGGCTGACGGCCGGGTGATCGACGTCGGCTCGGCCGATTCGCGC
ACGGTATCGGAGGGGCAGGCGTATGGGCTGTTCTTCGCGCTGGTCGCGAACGACCGGCGCACGTTCGACACGATCCTCGC
ATGGACCGAGAACAACCTCGCGCAGGGCGACCTGAGCGCCCGTCTGCCGGCGTGGCTGTGGGGCCGCGCGCCGGACGGCG
CATGGCGCGTGCTCGACGCGAACGCGGCGTCGGACGCCGACCTGTGGATCGCATACACGCTCGTCGAAGCCGGCCGGCTG
TGGCGCGAGCGCAGCTACACGGCGCGCGGCGCGCTGCTCGCGAAGCGCGTGCTCGACGACGAGACGGCCAGCGTGCCGGG
CCTCGGCCTCACGCTGCTGCCCGGGCCGACCGGCTTCAAGCTGGCCAACGGTCAATGGCGCGTGAACCCGAGCTATTCGC
CGCCGCAGGTGATCCGCGGGCTCGCCACGCGCCTGCCCGACGATCGGCGCTGGGCCGCGCTCGCGGCCAGCACTGGCCGC
GTGCTGCTCGACACCGCGCCGAAGGGCTTCTCGCCGGACTGGGCGCTGTATCGCGCGGGCGCCGGCTTCGGACCCGATCC
GCAAACCCGCGCGGAAAGCGCGTACAACGCGATCCGCGTGTATCTGTGGGCCGGCATGCTCGATCGCGCCGATCCGCTCG
CCGCGCCGCTGCTCGCGCGGTTTGCACCGTTTGCCGACTACATCGCCGCGCATGGCGCGCCGCCGGAGAAGGTCGACACG
ACGACCGGCGTCGCGGGCCCGAACGACGGCAACGGCGGCTTCTCCGCGGCGGCCGTGCCGTTCCTCGACGCGCGCGGCCA
GCGTGCGCTCGCCGATGCGCAGGCCGCGCGGGTCGATACGCTCGCGCGCCAGTCGGCGCCCGGCTACTACACGAGCGTGC
TGACGCTGTTCGGCCTCGGCTGGCGCGAGGGCCGCTACCGGTTCGGCGCGGACGGCTCGCTCGACGCGCGCTGGGAGGGG
CATCCATGCGCGGCCCGATGA

Upstream 100 bases:

>100_bases
CGTGCTCGGCGTGGTCGGCGTCGCCGCGGGGCTGCTGCTCGCGCTCGGCGTGTTCAGCGTGCTGCAGAGAATCGCCGCGC
GTCGACGGGGGATGTAACGG

Downstream 100 bases:

>100_bases
AGCGCACCGCACCGCGCGTCGCGGGGTTCGCGTGGCTCGCGTCGTCGGTCTGCGCGGCGGCGCCGGCCGCGGCTGCTGCC
ACCACCGCCGCCGCGGTTGC

Product: endo-1,4-D-glucanase

Products: NA

Alternate protein names: Carboxymethylcellulase; CMCase; Cellulase; Endo-1,4-beta-glucanase [H]

Number of amino acids: Translated: 406; Mature: 405

Protein sequence:

>406_residues
MAWAFARRRATRPARRVGTTLVLAVAAACAATGAAGRAQAAQSGAADVQCGAAWPRWDAFKRDFVSADGRVIDVGSADSR
TVSEGQAYGLFFALVANDRRTFDTILAWTENNLAQGDLSARLPAWLWGRAPDGAWRVLDANAASDADLWIAYTLVEAGRL
WRERSYTARGALLAKRVLDDETASVPGLGLTLLPGPTGFKLANGQWRVNPSYSPPQVIRGLATRLPDDRRWAALAASTGR
VLLDTAPKGFSPDWALYRAGAGFGPDPQTRAESAYNAIRVYLWAGMLDRADPLAAPLLARFAPFADYIAAHGAPPEKVDT
TTGVAGPNDGNGGFSAAAVPFLDARGQRALADAQAARVDTLARQSAPGYYTSVLTLFGLGWREGRYRFGADGSLDARWEG
HPCAAR

Sequences:

>Translated_406_residues
MAWAFARRRATRPARRVGTTLVLAVAAACAATGAAGRAQAAQSGAADVQCGAAWPRWDAFKRDFVSADGRVIDVGSADSR
TVSEGQAYGLFFALVANDRRTFDTILAWTENNLAQGDLSARLPAWLWGRAPDGAWRVLDANAASDADLWIAYTLVEAGRL
WRERSYTARGALLAKRVLDDETASVPGLGLTLLPGPTGFKLANGQWRVNPSYSPPQVIRGLATRLPDDRRWAALAASTGR
VLLDTAPKGFSPDWALYRAGAGFGPDPQTRAESAYNAIRVYLWAGMLDRADPLAAPLLARFAPFADYIAAHGAPPEKVDT
TTGVAGPNDGNGGFSAAAVPFLDARGQRALADAQAARVDTLARQSAPGYYTSVLTLFGLGWREGRYRFGADGSLDARWEG
HPCAAR
>Mature_405_residues
AWAFARRRATRPARRVGTTLVLAVAAACAATGAAGRAQAAQSGAADVQCGAAWPRWDAFKRDFVSADGRVIDVGSADSRT
VSEGQAYGLFFALVANDRRTFDTILAWTENNLAQGDLSARLPAWLWGRAPDGAWRVLDANAASDADLWIAYTLVEAGRLW
RERSYTARGALLAKRVLDDETASVPGLGLTLLPGPTGFKLANGQWRVNPSYSPPQVIRGLATRLPDDRRWAALAASTGRV
LLDTAPKGFSPDWALYRAGAGFGPDPQTRAESAYNAIRVYLWAGMLDRADPLAAPLLARFAPFADYIAAHGAPPEKVDTT
TGVAGPNDGNGGFSAAAVPFLDARGQRALADAQAARVDTLARQSAPGYYTSVLTLFGLGWREGRYRFGADGSLDARWEGH
PCAAR

Specific function: Hydrolyzes carboxymethylcellulose [H]

COG id: COG3405

COG function: function code G; Endoglucanase Y

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 8 (cellulase D) family [H]

Homologues:

Organism=Escherichia coli, GI1789951, Length=363, Percent_Identity=49.5867768595041, Blast_Score=334, Evalue=5e-93,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008928
- InterPro:   IPR012341
- InterPro:   IPR002037
- InterPro:   IPR019834 [H]

Pfam domain/function: PF01270 Glyco_hydro_8 [H]

EC number: =3.2.1.4 [H]

Molecular weight: Translated: 43292; Mature: 43161

Theoretical pI: Translated: 9.65; Mature: 9.65

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.2 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAWAFARRRATRPARRVGTTLVLAVAAACAATGAAGRAQAAQSGAADVQCGAAWPRWDAF
CCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCEEECCCCCCHHHH
KRDFVSADGRVIDVGSADSRTVSEGQAYGLFFALVANDRRTFDTILAWTENNLAQGDLSA
HHHHHCCCCCEEECCCCCCCCCCCCCCEEEEEEEEECCCCCEEHHEEECCCCCCCCCHHH
RLPAWLWGRAPDGAWRVLDANAASDADLWIAYTLVEAGRLWRERSYTARGALLAKRVLDD
CCCHHEECCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCC
ETASVPGLGLTLLPGPTGFKLANGQWRVNPSYSPPQVIRGLATRLPDDRRWAALAASTGR
CCCCCCCCCEEECCCCCCCEECCCEEEECCCCCCHHHHHHHHHHCCCCCCEEEEECCCCC
VLLDTAPKGFSPDWALYRAGAGFGPDPQTRAESAYNAIRVYLWAGMLDRADPLAAPLLAR
EEEECCCCCCCCCHHEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
FAPFADYIAAHGAPPEKVDTTTGVAGPNDGNGGFSAAAVPFLDARGQRALADAQAARVDT
HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCHHHCCCCHHHHHHHHHHHHH
LARQSAPGYYTSVLTLFGLGWREGRYRFGADGSLDARWEGHPCAAR
HHHHCCCCHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AWAFARRRATRPARRVGTTLVLAVAAACAATGAAGRAQAAQSGAADVQCGAAWPRWDAF
CCHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCEEECCCCCCHHHH
KRDFVSADGRVIDVGSADSRTVSEGQAYGLFFALVANDRRTFDTILAWTENNLAQGDLSA
HHHHHCCCCCEEECCCCCCCCCCCCCCEEEEEEEEECCCCCEEHHEEECCCCCCCCCHHH
RLPAWLWGRAPDGAWRVLDANAASDADLWIAYTLVEAGRLWRERSYTARGALLAKRVLDD
CCCHHEECCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCC
ETASVPGLGLTLLPGPTGFKLANGQWRVNPSYSPPQVIRGLATRLPDDRRWAALAASTGR
CCCCCCCCCEEECCCCCCCEECCCEEEECCCCCCHHHHHHHHHHCCCCCCEEEEECCCCC
VLLDTAPKGFSPDWALYRAGAGFGPDPQTRAESAYNAIRVYLWAGMLDRADPLAAPLLAR
EEEECCCCCCCCCHHEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
FAPFADYIAAHGAPPEKVDTTTGVAGPNDGNGGFSAAAVPFLDARGQRALADAQAARVDT
HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCHHHCCCCHHHHHHHHHHHHH
LARQSAPGYYTSVLTLFGLGWREGRYRFGADGSLDARWEGHPCAAR
HHHHCCCCHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]