The gene/protein map for NC_008390 is currently unavailable.
Definition Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence.
Accession NC_008390
Length 3,556,545

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The map label for this gene is 115351302

Identifier: 115351302

GI number: 115351302

Start: 1364616

End: 1365440

Strand: Direct

Name: 115351302

Synonym: Bamb_1249

Alternate gene names: NA

Gene position: 1364616-1365440 (Clockwise)

Preceding gene: 115351301

Following gene: 115351305

Centisome position: 38.37

GC content: 67.76

Gene sequence:

>825_bases
ATGGACATCCGGAACGTGAAATCGCGTATCAAGCTGCCCGCGGCGACCCTCGCCGCACTGTCCGCCGTCGCGGCACTCAC
CGCGCTCGTCGCGCCATCACCGGCCAATGCCGCCGAGCCGGCGCATCCCGAGCGTCAACTGCAAAAGTTCATCCACGACA
CCTACGGCAACTGGCGCGCCGATCGCAAGGGCTGGCAGTCGGACGCCGGTGATTTCATTTACGCGTCGTGCGGATCGCTG
CGCGTCGCGACGGCCGACGGCCCGCGCACGCTGCTCGCGATGTGCGGCGAGACCGAGGACGCCGTGCAGAACGGCATGCC
GGGGATGGATTCCGATGCGACGCCGGGCACCATCGACCTGTACGTGCTTCGTCCTTCGCAGGACGGCGCGACGCTCGAAC
CGGCGCTGAAGAAGACGGGCATCGTGTCCGGCGGCCGCGGCGAGCCGGGCACGGTAAGCATCCAGCGGCTTGGGCCGCAT
CTGTTCGGTTTCGTTCTCGGCAACAGCGACTCGCGGCAAGGCTATACGCAAAGCATGCGCTCGATCTGGCTGCCGTACGG
AGACGCGCTGGTGCCGGCGGCGGCGCGCATCGACGAAGCGCTCGACAATGCGGAATCGAACGAATGCGCGAACGATCCCG
CGCGCTGCGAGGCACGCCGCTTCGCGATCGCGCCGGACACGAGCGTCAACGATAGCGTCTATCCGCTGATCGTCACCGAG
ACCGGCACGCGCGGCAATCGCGCGATTCACGCGCGCCATACGGTGAAGTTCGACGCGGCGCGCGGCCGCTACATCGTGCC
GAAGGCCGTGCGCGACGGGTATTGA

Upstream 100 bases:

>100_bases
CGACGGCTGGGTGCCGACAGCGCGGCTGAAGCGCGACGGTACCGGCATCGCGCCGCGGCAACCGTGATCGCCGGCCTGAC
TCACCCAATCGAACTCCGAC

Downstream 100 bases:

>100_bases
GCGGCCCGTGCGGGGTACCGCAGAACCGCGGATCCGGGCGGCATCGCGCCGCCCGCCCGTCACACGTACACGTAGCGCAC
GAGGTGGAAGAACACCGGCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 274; Mature: 274

Protein sequence:

>274_residues
MDIRNVKSRIKLPAATLAALSAVAALTALVAPSPANAAEPAHPERQLQKFIHDTYGNWRADRKGWQSDAGDFIYASCGSL
RVATADGPRTLLAMCGETEDAVQNGMPGMDSDATPGTIDLYVLRPSQDGATLEPALKKTGIVSGGRGEPGTVSIQRLGPH
LFGFVLGNSDSRQGYTQSMRSIWLPYGDALVPAAARIDEALDNAESNECANDPARCEARRFAIAPDTSVNDSVYPLIVTE
TGTRGNRAIHARHTVKFDAARGRYIVPKAVRDGY

Sequences:

>Translated_274_residues
MDIRNVKSRIKLPAATLAALSAVAALTALVAPSPANAAEPAHPERQLQKFIHDTYGNWRADRKGWQSDAGDFIYASCGSL
RVATADGPRTLLAMCGETEDAVQNGMPGMDSDATPGTIDLYVLRPSQDGATLEPALKKTGIVSGGRGEPGTVSIQRLGPH
LFGFVLGNSDSRQGYTQSMRSIWLPYGDALVPAAARIDEALDNAESNECANDPARCEARRFAIAPDTSVNDSVYPLIVTE
TGTRGNRAIHARHTVKFDAARGRYIVPKAVRDGY
>Mature_274_residues
MDIRNVKSRIKLPAATLAALSAVAALTALVAPSPANAAEPAHPERQLQKFIHDTYGNWRADRKGWQSDAGDFIYASCGSL
RVATADGPRTLLAMCGETEDAVQNGMPGMDSDATPGTIDLYVLRPSQDGATLEPALKKTGIVSGGRGEPGTVSIQRLGPH
LFGFVLGNSDSRQGYTQSMRSIWLPYGDALVPAAARIDEALDNAESNECANDPARCEARRFAIAPDTSVNDSVYPLIVTE
TGTRGNRAIHARHTVKFDAARGRYIVPKAVRDGY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29278; Mature: 29278

Theoretical pI: Translated: 7.03; Mature: 7.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIRNVKSRIKLPAATLAALSAVAALTALVAPSPANAAEPAHPERQLQKFIHDTYGNWRA
CCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCC
DRKGWQSDAGDFIYASCGSLRVATADGPRTLLAMCGETEDAVQNGMPGMDSDATPGTIDL
CCCCCCCCCCCEEEEECCCEEEEECCCCHHHHHHCCCCHHHHHCCCCCCCCCCCCCEEEE
YVLRPSQDGATLEPALKKTGIVSGGRGEPGTVSIQRLGPHLFGFVLGNSDSRQGYTQSMR
EEEECCCCCCCCCHHHHHCCCCCCCCCCCCEEEHHHHCCCEEEEEECCCCCCCHHHHHHH
SIWLPYGDALVPAAARIDEALDNAESNECANDPARCEARRFAIAPDTSVNDSVYPLIVTE
HHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHEEEECCCCCCCCCEEEEEEEE
TGTRGNRAIHARHTVKFDAARGRYIVPKAVRDGY
CCCCCCEEEEEEEEEEEECCCCCEECCHHHCCCC
>Mature Secondary Structure
MDIRNVKSRIKLPAATLAALSAVAALTALVAPSPANAAEPAHPERQLQKFIHDTYGNWRA
CCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCC
DRKGWQSDAGDFIYASCGSLRVATADGPRTLLAMCGETEDAVQNGMPGMDSDATPGTIDL
CCCCCCCCCCCEEEEECCCEEEEECCCCHHHHHHCCCCHHHHHCCCCCCCCCCCCCEEEE
YVLRPSQDGATLEPALKKTGIVSGGRGEPGTVSIQRLGPHLFGFVLGNSDSRQGYTQSMR
EEEECCCCCCCCCHHHHHCCCCCCCCCCCCEEEHHHHCCCEEEEEECCCCCCCHHHHHHH
SIWLPYGDALVPAAARIDEALDNAESNECANDPARCEARRFAIAPDTSVNDSVYPLIVTE
HHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHEEEECCCCCCCCCEEEEEEEE
TGTRGNRAIHARHTVKFDAARGRYIVPKAVRDGY
CCCCCCEEEEEEEEEEEECCCCCEECCHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA