Definition Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence.
Accession NC_008390
Length 3,556,545

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The map label for this gene is 115351301

Identifier: 115351301

GI number: 115351301

Start: 1363809

End: 1364582

Strand: Direct

Name: 115351301

Synonym: Bamb_1248

Alternate gene names: NA

Gene position: 1363809-1364582 (Clockwise)

Preceding gene: 115351300

Following gene: 115351302

Centisome position: 38.35

GC content: 68.73

Gene sequence:

>774_bases
ATGAAGAACGAGATCATCACGCTGGAGGGCGTGAAGGGCGCGGCCATGCGCGGTGGATGGTTCGCGGCGATTGCGGTGTA
TGTCGCGCTGGCGGGACTGGGCGTAGCTGCCGCGCACGCGGCGGTGCCCGTGTCGTGCGACGAAGGGCTGACACGACTGA
TCGTGCCGGCATTGCGGCATCCCGCGTTCGAGCGGCGCGCGATCCATGCGGAGCCGGCGGAGCTGACCGGTCAACCGGAA
GGCGTGTACGGCGTCAGGCTGTTCGTGAAGCCCGACCATCCGGGCACGCCGAACCAGGACGCGACGATCGGTTGGGTCAC
GCTCGACGCACATGCGTTGCGTGCGCTCGACGTCACGCGCGATCCGGCGCAGCCTGATGTGCTGGCGATCGACCCGCACG
CGCTGTCGCGCTACATATCGACGTGTATCGCCCCGGCCGCGCCTGCCAGGACCATCGCATCCGCTCCCGGCGCGATCGAT
TGTGACGCGCTGAACCGTCGCGCACAGGAGCGGGGCGACGTCGTGACGATCCGCGACGCGGGACGCATCGTGACAGGCAA
GGGGCGACTGCCGTTCTTTTCCGCGCCGGATGACGCATGCCGAATCGGCGGGCTGTTCATCGTCGAGCACGATCACGTCG
CCGCGCGAACCGAATACGGCCGGTTCACGTCGGTCACCTACCTGAACCCCCGCACGAAAAGCCGGGCCGACGGCTGGGTG
CCGACAGCGCGGCTGAAGCGCGACGGTACCGGCATCGCGCCGCGGCAACCGTGA

Upstream 100 bases:

>100_bases
CGATGCGCACTTGCGATGCCGCGCCGTGCGTGTACGCTACGGCCTCGCGGGCATCGCCCGCGCGTGCGGCAGGGGCCGCG
CGCATCGACCGGATCCTGGA

Downstream 100 bases:

>100_bases
TCGCCGGCCTGACTCACCCAATCGAACTCCGACATGGACATCCGGAACGTGAAATCGCGTATCAAGCTGCCCGCGGCGAC
CCTCGCCGCACTGTCCGCCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 257; Mature: 257

Protein sequence:

>257_residues
MKNEIITLEGVKGAAMRGGWFAAIAVYVALAGLGVAAAHAAVPVSCDEGLTRLIVPALRHPAFERRAIHAEPAELTGQPE
GVYGVRLFVKPDHPGTPNQDATIGWVTLDAHALRALDVTRDPAQPDVLAIDPHALSRYISTCIAPAAPARTIASAPGAID
CDALNRRAQERGDVVTIRDAGRIVTGKGRLPFFSAPDDACRIGGLFIVEHDHVAARTEYGRFTSVTYLNPRTKSRADGWV
PTARLKRDGTGIAPRQP

Sequences:

>Translated_257_residues
MKNEIITLEGVKGAAMRGGWFAAIAVYVALAGLGVAAAHAAVPVSCDEGLTRLIVPALRHPAFERRAIHAEPAELTGQPE
GVYGVRLFVKPDHPGTPNQDATIGWVTLDAHALRALDVTRDPAQPDVLAIDPHALSRYISTCIAPAAPARTIASAPGAID
CDALNRRAQERGDVVTIRDAGRIVTGKGRLPFFSAPDDACRIGGLFIVEHDHVAARTEYGRFTSVTYLNPRTKSRADGWV
PTARLKRDGTGIAPRQP
>Mature_257_residues
MKNEIITLEGVKGAAMRGGWFAAIAVYVALAGLGVAAAHAAVPVSCDEGLTRLIVPALRHPAFERRAIHAEPAELTGQPE
GVYGVRLFVKPDHPGTPNQDATIGWVTLDAHALRALDVTRDPAQPDVLAIDPHALSRYISTCIAPAAPARTIASAPGAID
CDALNRRAQERGDVVTIRDAGRIVTGKGRLPFFSAPDDACRIGGLFIVEHDHVAARTEYGRFTSVTYLNPRTKSRADGWV
PTARLKRDGTGIAPRQP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27385; Mature: 27385

Theoretical pI: Translated: 8.64; Mature: 8.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNEIITLEGVKGAAMRGGWFAAIAVYVALAGLGVAAAHAAVPVSCDEGLTRLIVPALRH
CCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHCCCCCHHHCHHHHHHHHHHC
PAFERRAIHAEPAELTGQPEGVYGVRLFVKPDHPGTPNQDATIGWVTLDAHALRALDVTR
CCHHHHCCCCCCHHHCCCCCCEEEEEEEEECCCCCCCCCCCEEEEEEECHHHHEEEECCC
DPAQPDVLAIDPHALSRYISTCIAPAAPARTIASAPGAIDCDALNRRAQERGDVVTIRDA
CCCCCCEEEECHHHHHHHHHHHHCCCCCCHHHHCCCCCCCHHHHHHHHHHCCCEEEEECC
GRIVTGKGRLPFFSAPDDACRIGGLFIVEHDHVAARTEYGRFTSVTYLNPRTKSRADGWV
CEEEECCCCCCEECCCCCHHEECCEEEEECCCEEEECCCCCEEEEEEECCCCCCCCCCCC
PTARLKRDGTGIAPRQP
CCHHEECCCCCCCCCCC
>Mature Secondary Structure
MKNEIITLEGVKGAAMRGGWFAAIAVYVALAGLGVAAAHAAVPVSCDEGLTRLIVPALRH
CCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHCCCCCHHHCHHHHHHHHHHC
PAFERRAIHAEPAELTGQPEGVYGVRLFVKPDHPGTPNQDATIGWVTLDAHALRALDVTR
CCHHHHCCCCCCHHHCCCCCCEEEEEEEEECCCCCCCCCCCEEEEEEECHHHHEEEECCC
DPAQPDVLAIDPHALSRYISTCIAPAAPARTIASAPGAIDCDALNRRAQERGDVVTIRDA
CCCCCCEEEECHHHHHHHHHHHHCCCCCCHHHHCCCCCCCHHHHHHHHHHCCCEEEEECC
GRIVTGKGRLPFFSAPDDACRIGGLFIVEHDHVAARTEYGRFTSVTYLNPRTKSRADGWV
CEEEECCCCCCEECCCCCHHEECCEEEEECCCEEEECCCCCEEEEEEECCCCCCCCCCCC
PTARLKRDGTGIAPRQP
CCHHEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA