| Definition | Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008390 |
| Length | 3,556,545 |
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The map label for this gene is pstC
Identifier: 115351231
GI number: 115351231
Start: 1289571
End: 1290557
Strand: Direct
Name: pstC
Synonym: Bamb_1178
Alternate gene names: 115351231
Gene position: 1289571-1290557 (Clockwise)
Preceding gene: 115351230
Following gene: 115351232
Centisome position: 36.26
GC content: 64.13
Gene sequence:
>987_bases ATGTCTGAAATTTCCTACACGTCCTCCCGGTCCCCCGACGCCGCGTCGCAACGCGCGCCGAGCCGCCTCGGCGACGTTCT GTTCGGCGGCCTCGCATGGCTTGCCGCGATCGTGACCCTGCTGCTGCTGGGCGGGATCATCGTTTCCCTGATCATTGCGT CGATGCCGACCATCCAGAAGTTCGGCCTCGGCTTCCTGTTTCAATCCGAGTGGGATCCGAACTCGGATGTCTTCGGTGCG CTCGTGCCGATCTACGGCACGCTCGTGACGTCGATCATCGCGCTCGTGATCGCGGTGCCGGTCAGCTTCGGCATCGCGCT GTTCCTCACCGAGCTGTCGCCCGTGTGGCTGCGCCGCCCGCTCGGCATCGCGATCGAGCTGCTCGCCGCGATTCCGTCGA TCGTATACGGCATGTGGGGCCTGCTCGTGTTCGCGCCGATCTTCGCCGAATACTTCCAGAAGCCGATCGGCCGCATCTTC AAGGACGTGTGGGTGGTCGGTCCGCTGACGTCCGGCGCGCCGATCGGCATCGGCATCCTCGCGGCCGGCGTGATCCTCGC GATCATGATCATCCCGTACATCGCGTCGGTGATGCGCGACGTGTTCGAAGTCACGCCCGTGCTGCTGAAGGAATCGGCGT ACGGGATCGGCTGCACGACGTGGGAAGTGATGTGGAAGGTCGTGCTGCCCTATACGAAGACCGGCGTGATCGGCGGCGTG ATGCTCGGCCTCGGCCGCGCGCTCGGCGAAACGATGGCCGTGACCTTCGTGATCGGCAACACGAACCTGCTCGACAGCGT GTCGCTGTTCGCGCCGGGCAACAGCATCACGTCGGCGCTCGCGAACGAATTCGCGGAAGCGCAGCCGGGCCTGCATACGT CCGCGCTGATGGAACTGGGCCTGATCCTGTTCGTGATCACGTTCATCGTGCTGTCCGTCTCCAAACTGCTGCTGCTTCGT CTCGAGAAGGGAGAGGGCAAGAAATGA
Upstream 100 bases:
>100_bases GAGTAAGCATTGCAGCGGTTCACTGCCCGGCCGTGCCGGTCGGGCAGTGTGTGCGGTAAGGCCGGGCGTCACGGCGCCCG GCGATCCAGAACAGGCACCC
Downstream 100 bases:
>100_bases GCGAGCCCATCATGAATTTCCCCGGGCCGAACGGCGCCGCGCTCGACGCGATGCGCAACCGCCTGCAACGCAGGCGCAAG TTCACCAACGCGATCGCGCT
Product: phosphate transporter permease subunit PstC
Products: ADP; phosphate [Cytoplasm]; phosphate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 328; Mature: 327
Protein sequence:
>328_residues MSEISYTSSRSPDAASQRAPSRLGDVLFGGLAWLAAIVTLLLLGGIIVSLIIASMPTIQKFGLGFLFQSEWDPNSDVFGA LVPIYGTLVTSIIALVIAVPVSFGIALFLTELSPVWLRRPLGIAIELLAAIPSIVYGMWGLLVFAPIFAEYFQKPIGRIF KDVWVVGPLTSGAPIGIGILAAGVILAIMIIPYIASVMRDVFEVTPVLLKESAYGIGCTTWEVMWKVVLPYTKTGVIGGV MLGLGRALGETMAVTFVIGNTNLLDSVSLFAPGNSITSALANEFAEAQPGLHTSALMELGLILFVITFIVLSVSKLLLLR LEKGEGKK
Sequences:
>Translated_328_residues MSEISYTSSRSPDAASQRAPSRLGDVLFGGLAWLAAIVTLLLLGGIIVSLIIASMPTIQKFGLGFLFQSEWDPNSDVFGA LVPIYGTLVTSIIALVIAVPVSFGIALFLTELSPVWLRRPLGIAIELLAAIPSIVYGMWGLLVFAPIFAEYFQKPIGRIF KDVWVVGPLTSGAPIGIGILAAGVILAIMIIPYIASVMRDVFEVTPVLLKESAYGIGCTTWEVMWKVVLPYTKTGVIGGV MLGLGRALGETMAVTFVIGNTNLLDSVSLFAPGNSITSALANEFAEAQPGLHTSALMELGLILFVITFIVLSVSKLLLLR LEKGEGKK >Mature_327_residues SEISYTSSRSPDAASQRAPSRLGDVLFGGLAWLAAIVTLLLLGGIIVSLIIASMPTIQKFGLGFLFQSEWDPNSDVFGAL VPIYGTLVTSIIALVIAVPVSFGIALFLTELSPVWLRRPLGIAIELLAAIPSIVYGMWGLLVFAPIFAEYFQKPIGRIFK DVWVVGPLTSGAPIGIGILAAGVILAIMIIPYIASVMRDVFEVTPVLLKESAYGIGCTTWEVMWKVVLPYTKTGVIGGVM LGLGRALGETMAVTFVIGNTNLLDSVSLFAPGNSITSALANEFAEAQPGLHTSALMELGLILFVITFIVLSVSKLLLLRL EKGEGKK
Specific function: Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0573
COG function: function code P; ABC-type phosphate transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1790164, Length=309, Percent_Identity=74.7572815533981, Blast_Score=461, Evalue=1e-131,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR011864 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 34898; Mature: 34767
Theoretical pI: Translated: 5.32; Mature: 5.32
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEISYTSSRSPDAASQRAPSRLGDVLFGGLAWLAAIVTLLLLGGIIVSLIIASMPTIQK CCCCCCCCCCCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH FGLGFLFQSEWDPNSDVFGALVPIYGTLVTSIIALVIAVPVSFGIALFLTELSPVWLRRP HCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCH LGIAIELLAAIPSIVYGMWGLLVFAPIFAEYFQKPIGRIFKDVWVVGPLTSGAPIGIGIL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH AAGVILAIMIIPYIASVMRDVFEVTPVLLKESAYGIGCTTWEVMWKVVLPYTKTGVIGGV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHH MLGLGRALGETMAVTFVIGNTNLLDSVSLFAPGNSITSALANEFAEAQPGLHTSALMELG HHHHHHHHHHHHEEEEEECCCCHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHH LILFVITFIVLSVSKLLLLRLEKGEGKK HHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure SEISYTSSRSPDAASQRAPSRLGDVLFGGLAWLAAIVTLLLLGGIIVSLIIASMPTIQK CCCCCCCCCCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH FGLGFLFQSEWDPNSDVFGALVPIYGTLVTSIIALVIAVPVSFGIALFLTELSPVWLRRP HCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCH LGIAIELLAAIPSIVYGMWGLLVFAPIFAEYFQKPIGRIFKDVWVVGPLTSGAPIGIGIL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH AAGVILAIMIIPYIASVMRDVFEVTPVLLKESAYGIGCTTWEVMWKVVLPYTKTGVIGGV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHH MLGLGRALGETMAVTFVIGNTNLLDSVSLFAPGNSITSALANEFAEAQPGLHTSALMELG HHHHHHHHHHHHEEEEEECCCCHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHH LILFVITFIVLSVSKLLLLRLEKGEGKK HHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; phosphate [Periplasm]; H2O [C]
Specific reaction: ATP + phosphate [Periplasm] + H2O = ADP + phosphate [Cytoplasm] + phosphate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]